RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 TRAPPC3LQ5T215 181 aa28.77■■■□□ 2.2
GFRA3-202ENST00000378362 VSIG10Q8N0Z9 540 aa28.77■■■□□ 2.2
GFRA3-202ENST00000378362 CCDC87Q9NVE4 849 aa28.77■■■□□ 2.2
GFRA3-202ENST00000378362 DIEXFQ68CQ4 756 aaKnown RBP28.76■■■□□ 2.19
GFRA3-202ENST00000378362 SGIP1Q9BQI5 828 aa28.76■■■□□ 2.19
GFRA3-202ENST00000378362 A1BGP04217 495 aa28.75■■■□□ 2.19
GFRA3-202ENST00000378362 LMOD3Q0VAK6 560 aa28.75■■■□□ 2.19
GFRA3-202ENST00000378362 FLAD1Q8NFF5 587 aa28.75■■■□□ 2.19
GFRA3-202ENST00000378362 TSPYL4Q9UJ04 414 aa28.75■■■□□ 2.19
GFRA3-202ENST00000378362 HMGB2P26583 209 aaKnown RBP28.74■■■□□ 2.19
GFRA3-202ENST00000378362 SLC16A10Q8TF71 515 aa28.74■■■□□ 2.19
GFRA3-202ENST00000378362 ZNF330Q9Y3S2 320 aaPredicted RBP28.74■■■□□ 2.19
GFRA3-202ENST00000378362 SRP68Q9UHB9 627 aaKnown RBP28.73■■■□□ 2.19
GFRA3-202ENST00000378362 STARD3NLO95772 234 aa28.72■■■□□ 2.19
GFRA3-202ENST00000378362 RFC4P35249 363 aa28.71■■■□□ 2.19
GFRA3-202ENST00000378362 EIF4A1P60842 406 aaKnown RBP28.71■■■□□ 2.19
GFRA3-202ENST00000378362 KDM3BQ7LBC6 1761 aa28.7■■■□□ 2.18
GFRA3-202ENST00000378362 SNRPA1P09661 255 aaKnown RBP28.7■■■□□ 2.18
GFRA3-202ENST00000378362 KLHL34Q8N239 644 aa28.7■■■□□ 2.18
GFRA3-202ENST00000378362 KRT24Q2M2I5 525 aa28.69■■■□□ 2.18
GFRA3-202ENST00000378362 CICQ96RK0 1608 aaPredicted RBP28.69■■■□□ 2.18
GFRA3-202ENST00000378362 SOS1Q07889 1333 aaPredicted RBP28.68■■■□□ 2.18
GFRA3-202ENST00000378362 MIER1Q8N108 512 aa28.68■■■□□ 2.18
GFRA3-202ENST00000378362 ARXQ96QS3 562 aa28.67■■■□□ 2.18
GFRA3-202ENST00000378362 POLD1P28340 1107 aa28.66■■■□□ 2.18
GFRA3-202ENST00000378362 TEX13AQ9BXU3 409 aaPredicted RBP28.66■■■□□ 2.18
GFRA3-202ENST00000378362 GIGYF1O75420 1035 aaPredicted RBP28.66■■■□□ 2.18
GFRA3-202ENST00000378362 C4AP0C0L4 1744 aa28.65■■■□□ 2.18
GFRA3-202ENST00000378362 FHDC1Q9C0D6 1143 aaPredicted RBP28.65■■■□□ 2.18
GFRA3-202ENST00000378362 CHL1O00533 1208 aa28.64■■■□□ 2.18
GFRA3-202ENST00000378362 GYS1P13807 737 aa28.64■■■□□ 2.18
GFRA3-202ENST00000378362 ADRA2BP18089 450 aa28.64■■■□□ 2.18
GFRA3-202ENST00000378362 COL15A1P39059 1388 aa28.63■■■□□ 2.17
GFRA3-202ENST00000378362 USPL1Q5W0Q7 1092 aa28.63■■■□□ 2.17
GFRA3-202ENST00000378362 NECTIN2Q92692 538 aa28.63■■■□□ 2.17
GFRA3-202ENST00000378362 TBC1D2BQ9UPU7 963 aa28.63■■■□□ 2.17
GFRA3-202ENST00000378362 NBPF26B4DH59 902 aa28.62■■■□□ 2.17
GFRA3-202ENST00000378362 EIF5P55010 431 aaKnown RBP28.62■■■□□ 2.17
GFRA3-202ENST00000378362 FKBP8Q14318 412 aa28.62■■■□□ 2.17
GFRA3-202ENST00000378362 NBPF10Q6P3W6 841 aaKnown RBP28.62■■■□□ 2.17
GFRA3-202ENST00000378362 NBPF15Q8N660 670 aa28.62■■■□□ 2.17
GFRA3-202ENST00000378362 EIF2S2P20042 333 aaKnown RBP28.61■■■□□ 2.17
GFRA3-202ENST00000378362 WWC1Q8IX03 1113 aa28.61■■■□□ 2.17
GFRA3-202ENST00000378362 NGEFQ8N5V2 710 aa28.61■■■□□ 2.17
GFRA3-202ENST00000378362 MBIPQ9NS73 344 aa28.61■■■□□ 2.17
GFRA3-202ENST00000378362 USP42Q9H9J4 1324 aaKnown RBP28.6■■■□□ 2.17
GFRA3-202ENST00000378362 MMP10P09238 476 aa28.6■■■□□ 2.17
GFRA3-202ENST00000378362 ZPR1O75312 459 aa28.59■■■□□ 2.17
GFRA3-202ENST00000378362 CFAP44Q96MT7 982 aa28.59■■■□□ 2.17
GFRA3-202ENST00000378362 SYT17Q9BSW7 474 aa28.58■■■□□ 2.17
GFRA3-202ENST00000378362 COL24A1Q17RW2 1714 aa28.58■■■□□ 2.17
GFRA3-202ENST00000378362 MYL6BP14649 208 aa28.57■■■□□ 2.16
GFRA3-202ENST00000378362 BCL2L12Q9HB09 334 aa28.57■■■□□ 2.16
GFRA3-202ENST00000378362 ELL2O00472 640 aaPredicted RBP28.56■■■□□ 2.16
GFRA3-202ENST00000378362 ANXA1P04083 346 aa28.56■■■□□ 2.16
GFRA3-202ENST00000378362 ZNF853P0CG23 659 aa28.56■■■□□ 2.16
GFRA3-202ENST00000378362 IL6STP40189 918 aaPredicted RBP28.56■■■□□ 2.16
GFRA3-202ENST00000378362 TSR2Q969E8 191 aaKnown RBP28.56■■■□□ 2.16
GFRA3-202ENST00000378362 BABAM1Q9NWV8 329 aa28.56■■■□□ 2.16
GFRA3-202ENST00000378362 NARFQ9UHQ1 456 aa28.56■■■□□ 2.16
GFRA3-202ENST00000378362 CCER2I3L3R5 266 aa28.55■■■□□ 2.16
GFRA3-202ENST00000378362 NLGN1Q8N2Q7 840 aa28.55■■■□□ 2.16
GFRA3-202ENST00000378362 BICDL1Q6ZP65 573 aa28.54■■■□□ 2.16
GFRA3-202ENST00000378362 IFT57Q9NWB7 429 aa28.54■■■□□ 2.16
GFRA3-202ENST00000378362 NPM2Q86SE8 214 aaKnown RBP28.53■■■□□ 2.16
GFRA3-202ENST00000378362 NLGN2Q8NFZ4 835 aa28.53■■■□□ 2.16
GFRA3-202ENST00000378362 GNAI1P63096 354 aa28.53■■■□□ 2.16
GFRA3-202ENST00000378362 CCDC27Q2M243 656 aa28.52■■■□□ 2.16
GFRA3-202ENST00000378362 PROSER3Q2NL68 480 aa28.52■■■□□ 2.16
GFRA3-202ENST00000378362 DZIP3Q86Y13 1208 aaKnown RBP28.52■■■□□ 2.16
GFRA3-202ENST00000378362 DDR1Q08345 913 aa28.51■■■□□ 2.15
GFRA3-202ENST00000378362 LAMB4A4D0S4 1761 aa28.51■■■□□ 2.15
GFRA3-202ENST00000378362 WWC3Q9ULE0 1092 aa28.5■■■□□ 2.15
GFRA3-202ENST00000378362 CALD1Q05682 793 aaKnown RBP28.5■■■□□ 2.15
GFRA3-202ENST00000378362 DUSP27Q5VZP5 1158 aa28.49■■■□□ 2.15
GFRA3-202ENST00000378362 C8orf58Q8NAV2 365 aa28.49■■■□□ 2.15
GFRA3-202ENST00000378362 SPINK5Q9NQ38 1064 aaPredicted RBP28.49■■■□□ 2.15
GFRA3-202ENST00000378362 A0A087WZG4 1122 aa28.48■■■□□ 2.15
GFRA3-202ENST00000378362 CAMTA2O94983 1202 aa28.48■■■□□ 2.15
GFRA3-202ENST00000378362 NFIXQ14938 502 aa28.48■■■□□ 2.15
GFRA3-202ENST00000378362 PDIA6Q15084 440 aa28.48■■■□□ 2.15
GFRA3-202ENST00000378362 TTLL7Q6ZT98 887 aa28.48■■■□□ 2.15
GFRA3-202ENST00000378362 TBC1D9BQ66K14 1250 aa28.47■■■□□ 2.15
GFRA3-202ENST00000378362 PARP3Q9Y6F1 533 aa28.47■■■□□ 2.15
GFRA3-202ENST00000378362 TM4SF1P30408 202 aa28.46■■■□□ 2.15
GFRA3-202ENST00000378362 TSPYL6Q8N831 410 aa28.46■■■□□ 2.15
GFRA3-202ENST00000378362 POLRMTO00411 1230 aaKnown RBP28.44■■■□□ 2.14
GFRA3-202ENST00000378362 HLFQ16534 295 aa28.44■■■□□ 2.14
GFRA3-202ENST00000378362 HDGFL1Q5TGJ6 251 aa28.43■■■□□ 2.14
GFRA3-202ENST00000378362 CCDC24Q8N4L8 307 aa28.43■■■□□ 2.14
GFRA3-202ENST00000378362 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
GFRA3-202ENST00000378362 AIMP1Q12904 312 aaKnown RBP28.43■■■□□ 2.14
GFRA3-202ENST00000378362 ZBTB3Q9H5J0 574 aa28.42■■■□□ 2.14
GFRA3-202ENST00000378362 TCERG1O14776 1098 aaKnown RBP28.41■■■□□ 2.14
GFRA3-202ENST00000378362 LRP10Q7Z4F1 713 aa28.41■■■□□ 2.14
GFRA3-202ENST00000378362 PELP1Q8IZL8 1130 aaKnown RBP28.41■■■□□ 2.14
GFRA3-202ENST00000378362 WDR63Q8IWG1 891 aa28.4■■■□□ 2.14
GFRA3-202ENST00000378362 FANCIQ9NVI1 1328 aa28.39■■■□□ 2.14
GFRA3-202ENST00000378362 SCN7AQ01118 1682 aa28.39■■■□□ 2.13
GFRA3-202ENST00000378362 FAM177BA6PVY3 158 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms