RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 NECTIN2Q92692 538 aa25.18■■□□□ 1.62
AUP1-201ENST00000377526 HDGFL1Q5TGJ6 251 aa25.17■■□□□ 1.62
AUP1-201ENST00000377526 TEX13AQ9BXU3 409 aaPredicted RBP25.17■■□□□ 1.62
AUP1-201ENST00000377526 CYP19A1P11511 503 aaPredicted RBP25.17■■□□□ 1.62
AUP1-201ENST00000377526 MYH14Q7Z406 1995 aaKnown RBP25.16■■□□□ 1.62
AUP1-201ENST00000377526 C4BP0C0L5 1744 aa25.16■■□□□ 1.62
AUP1-201ENST00000377526 CT47B1P0C2W7 299 aaPredicted RBP25.16■■□□□ 1.62
AUP1-201ENST00000377526 NUP188Q5SRE5 1749 aa25.15■■□□□ 1.62
AUP1-201ENST00000377526 TCERG1O14776 1098 aaKnown RBP25.14■■□□□ 1.62
AUP1-201ENST00000377526 STARD3NLO95772 234 aa25.13■■□□□ 1.61
AUP1-201ENST00000377526 A1BGP04217 495 aa25.13■■□□□ 1.61
AUP1-201ENST00000377526 PIP4K2AP48426 406 aaPredicted RBP25.13■■□□□ 1.61
AUP1-201ENST00000377526 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
AUP1-201ENST00000377526 PDIA6Q15084 440 aa25.11■■□□□ 1.61
AUP1-201ENST00000377526 CCDC30Q5VVM6 783 aa25.11■■□□□ 1.61
AUP1-201ENST00000377526 INTS5Q6P9B9 1019 aaKnown RBP25.11■■□□□ 1.61
AUP1-201ENST00000377526 CHPF2Q9P2E5 772 aa25.11■■□□□ 1.61
AUP1-201ENST00000377526 ZBTB1Q9Y2K1 713 aa25.11■■□□□ 1.61
AUP1-201ENST00000377526 NBPF26B4DH59 902 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 RARSP54136 660 aaKnown RBP25.1■■□□□ 1.61
AUP1-201ENST00000377526 PROSER3Q2NL68 480 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 NBPF14Q5TI25 921 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 NBPF10Q6P3W6 841 aaKnown RBP25.1■■□□□ 1.61
AUP1-201ENST00000377526 NBPF15Q8N660 670 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 SSH1Q8WYL5 1049 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 CNTNAP4Q9C0A0 1308 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 ANXA1P04083 346 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 ZNF428Q96B54 188 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 BCL2L13Q9BXK5 485 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 CCDC87Q9NVE4 849 aa25.1■■□□□ 1.61
AUP1-201ENST00000377526 ERBB4Q15303 1308 aa25.09■■□□□ 1.61
AUP1-201ENST00000377526 CACNA1FO60840 1977 aa25.08■■□□□ 1.6
AUP1-201ENST00000377526 ALDH1L2Q3SY69 923 aa25.07■■□□□ 1.6
AUP1-201ENST00000377526 DDX21Q9NR30 783 aaKnown RBP eCLIP25.07■■□□□ 1.6
AUP1-201ENST00000377526 DBF4Q9UBU7 674 aaPredicted RBP25.07■■□□□ 1.6
AUP1-201ENST00000377526 UBR3Q6ZT12 1888 aa25.07■■□□□ 1.6
AUP1-201ENST00000377526 MYL6BP14649 208 aa25.07■■□□□ 1.6
AUP1-201ENST00000377526 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
AUP1-201ENST00000377526 RC3H1Q5TC82 1133 aaKnown RBP25.07■■□□□ 1.6
AUP1-201ENST00000377526 LRP10Q7Z4F1 713 aa25.07■■□□□ 1.6
AUP1-201ENST00000377526 CHMP4AQ9BY43 222 aa25.07■■□□□ 1.6
AUP1-201ENST00000377526 RCAN3Q9UKA8 241 aa25.07■■□□□ 1.6
AUP1-201ENST00000377526 MRPL50Q8N5N7 158 aaKnown RBP25.06■■□□□ 1.6
AUP1-201ENST00000377526 STK31Q9BXU1 1019 aa25.06■■□□□ 1.6
AUP1-201ENST00000377526 TUBGCP6Q96RT7 1819 aa25.06■■□□□ 1.6
AUP1-201ENST00000377526 BCAR3O75815 825 aa25.05■■□□□ 1.6
AUP1-201ENST00000377526 SLC4A2P04920 1241 aa25.05■■□□□ 1.6
AUP1-201ENST00000377526 ZNF827Q17R98 1081 aa25.05■■□□□ 1.6
AUP1-201ENST00000377526 AMIGO3Q86WK7 504 aa25.05■■□□□ 1.6
AUP1-201ENST00000377526 SMC4Q9NTJ3 1288 aa25.05■■□□□ 1.6
AUP1-201ENST00000377526 SMIM5Q71RC9 77 aa25.04■■□□□ 1.6
AUP1-201ENST00000377526 G2E3Q7L622 706 aa25.04■■□□□ 1.6
AUP1-201ENST00000377526 AKT1S1Q96B36 256 aa25.04■■□□□ 1.6
AUP1-201ENST00000377526 AK7Q96M32 723 aa25.04■■□□□ 1.6
AUP1-201ENST00000377526 ANO8Q9HCE9 1232 aaPredicted RBP25.04■■□□□ 1.6
AUP1-201ENST00000377526 GNPATO15228 680 aa25.03■■□□□ 1.6
AUP1-201ENST00000377526 PHAXQ9H814 394 aaKnown RBP25.03■■□□□ 1.6
AUP1-201ENST00000377526 IL6STP40189 918 aaPredicted RBP25.02■■□□□ 1.6
AUP1-201ENST00000377526 EIF5P55010 431 aaKnown RBP25.01■■□□□ 1.59
AUP1-201ENST00000377526 HYPKQ9NX55 129 aa25.01■■□□□ 1.59
AUP1-201ENST00000377526 RPS6KA4O75676 772 aa25.01■■□□□ 1.59
AUP1-201ENST00000377526 ZNF330Q9Y3S2 320 aaPredicted RBP25.01■■□□□ 1.59
AUP1-201ENST00000377526 HMGB2P26583 209 aaKnown RBP25■■□□□ 1.59
AUP1-201ENST00000377526 COL15A1P39059 1388 aa24.99■■□□□ 1.59
AUP1-201ENST00000377526 C4AP0C0L4 1744 aa24.99■■□□□ 1.59
AUP1-201ENST00000377526 BRPF1P55201 1214 aaPredicted RBP24.99■■□□□ 1.59
AUP1-201ENST00000377526 XAGE3Q8WTP9 111 aa24.98■■□□□ 1.59
AUP1-201ENST00000377526 RTCBQ9Y3I0 505 aaKnown RBP24.98■■□□□ 1.59
AUP1-201ENST00000377526 CENPBP07199 599 aaPredicted RBP24.97■■□□□ 1.59
AUP1-201ENST00000377526 FLIIQ13045 1269 aa24.97■■□□□ 1.59
AUP1-201ENST00000377526 COPS6Q7L5N1 327 aa24.97■■□□□ 1.59
AUP1-201ENST00000377526 QSER1Q2KHR3 1735 aa24.97■■□□□ 1.59
AUP1-201ENST00000377526 AIMP1Q12904 312 aaKnown RBP24.97■■□□□ 1.59
AUP1-201ENST00000377526 TTLL7Q6ZT98 887 aa24.97■■□□□ 1.59
AUP1-201ENST00000377526 PHF14O94880 888 aa24.96■■□□□ 1.59
AUP1-201ENST00000377526 SLC15A2Q16348 729 aa24.96■■□□□ 1.59
AUP1-201ENST00000377526 STK32BQ9NY57 414 aa24.95■■□□□ 1.58
AUP1-201ENST00000377526 TFCP2L1Q9NZI6 479 aa24.95■■□□□ 1.58
AUP1-201ENST00000377526 NOB1Q9ULX3 412 aaKnown RBP24.95■■□□□ 1.58
AUP1-201ENST00000377526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.94■■□□□ 1.58
AUP1-201ENST00000377526 BCORQ6W2J9 1755 aa24.94■■□□□ 1.58
AUP1-201ENST00000377526 KIF16BQ96L93 1317 aa24.94■■□□□ 1.58
AUP1-201ENST00000377526 SSFA2P28290 1259 aa24.94■■□□□ 1.58
AUP1-201ENST00000377526 ARFGEF2Q9Y6D5 1785 aa24.93■■□□□ 1.58
AUP1-201ENST00000377526 SCN7AQ01118 1682 aa24.93■■□□□ 1.58
AUP1-201ENST00000377526 FRAT1Q92837 279 aaPredicted RBP24.93■■□□□ 1.58
AUP1-201ENST00000377526 ARHGEF1Q92888 912 aaKnown RBP24.93■■□□□ 1.58
AUP1-201ENST00000377526 TBC1D2BQ9UPU7 963 aa24.93■■□□□ 1.58
AUP1-201ENST00000377526 FKBP5Q13451 457 aaPredicted RBP24.92■■□□□ 1.58
AUP1-201ENST00000377526 DZIP3Q86Y13 1208 aaKnown RBP24.92■■□□□ 1.58
AUP1-201ENST00000377526 PNPLA7Q6ZV29 1317 aa24.92■■□□□ 1.58
AUP1-201ENST00000377526 ADCY9O60503 1353 aa24.92■■□□□ 1.58
AUP1-201ENST00000377526 ADRA2BP18089 450 aa24.91■■□□□ 1.58
AUP1-201ENST00000377526 TRAPPC3LQ5T215 181 aa24.91■■□□□ 1.58
AUP1-201ENST00000377526 NPM2Q86SE8 214 aaKnown RBP24.91■■□□□ 1.58
AUP1-201ENST00000377526 ARXQ96QS3 562 aa24.91■■□□□ 1.58
AUP1-201ENST00000377526 PTPRCP08575 1304 aa24.91■■□□□ 1.58
AUP1-201ENST00000377526 TNNQ9UQP3 1299 aa24.91■■□□□ 1.58
AUP1-201ENST00000377526 A0A087WZG4 1122 aa24.9■■□□□ 1.58
AUP1-201ENST00000377526 PLIN1O60240 522 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms