RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 DLG5Q8TDM6 1919 aa29.09■■■□□ 2.25
SRM-201ENST00000376957 A0A087WZG4 1122 aa29.08■■■□□ 2.25
SRM-201ENST00000376957 MMP10P09238 476 aa29.07■■■□□ 2.24
SRM-201ENST00000376957 SNRPA1P09661 255 aaKnown RBP29.07■■■□□ 2.24
SRM-201ENST00000376957 CANXP27824 592 aaKnown RBP29.07■■■□□ 2.24
SRM-201ENST00000376957 SOS1Q07889 1333 aaPredicted RBP29.06■■■□□ 2.24
SRM-201ENST00000376957 USP42Q9H9J4 1324 aaKnown RBP29.06■■■□□ 2.24
SRM-201ENST00000376957 GYS1P13807 737 aa29.06■■■□□ 2.24
SRM-201ENST00000376957 ZBTB1Q9Y2K1 713 aa29.06■■■□□ 2.24
SRM-201ENST00000376957 TMPOP42166 694 aaKnown RBP29.05■■■□□ 2.24
SRM-201ENST00000376957 ADAMTS8Q9UP79 889 aa29.05■■■□□ 2.24
SRM-201ENST00000376957 PARP3Q9Y6F1 533 aa29.05■■■□□ 2.24
SRM-201ENST00000376957 COL15A1P39059 1388 aa29.04■■■□□ 2.24
SRM-201ENST00000376957 GPR162Q16538 588 aa29.04■■■□□ 2.24
SRM-201ENST00000376957 CCDC146Q8IYE0 955 aa29.04■■■□□ 2.24
SRM-201ENST00000376957 KCNQ3O43525 872 aa29.03■■■□□ 2.24
SRM-201ENST00000376957 C4AP0C0L4 1744 aa29.03■■■□□ 2.24
SRM-201ENST00000376957 NARFQ9UHQ1 456 aa29.02■■■□□ 2.24
SRM-201ENST00000376957 ZNF330Q9Y3S2 320 aaPredicted RBP29.01■■■□□ 2.23
SRM-201ENST00000376957 IL6STP40189 918 aaPredicted RBP29■■■□□ 2.23
SRM-201ENST00000376957 NEUROD2Q15784 382 aa29■■■□□ 2.23
SRM-201ENST00000376957 PELP1Q8IZL8 1130 aaKnown RBP29■■■□□ 2.23
SRM-201ENST00000376957 SRP68Q9UHB9 627 aaKnown RBP29■■■□□ 2.23
SRM-201ENST00000376957 USPL1Q5W0Q7 1092 aa28.99■■■□□ 2.23
SRM-201ENST00000376957 BABAM1Q9NWV8 329 aa28.99■■■□□ 2.23
SRM-201ENST00000376957 MIS18AQ9NYP9 233 aa28.99■■■□□ 2.23
SRM-201ENST00000376957 EIF5P55010 431 aaKnown RBP28.98■■■□□ 2.23
SRM-201ENST00000376957 NLGN2Q8NFZ4 835 aa28.98■■■□□ 2.23
SRM-201ENST00000376957 THUMPD2Q9BTF0 503 aaKnown RBP28.98■■■□□ 2.23
SRM-201ENST00000376957 TSPYL4Q9UJ04 414 aa28.97■■■□□ 2.23
SRM-201ENST00000376957 USP16Q9Y5T5 823 aa28.97■■■□□ 2.23
SRM-201ENST00000376957 FKBP8Q14318 412 aa28.96■■■□□ 2.23
SRM-201ENST00000376957 RRP7AQ9Y3A4 280 aaKnown RBP28.96■■■□□ 2.23
SRM-201ENST00000376957 A1BGP04217 495 aa28.95■■■□□ 2.22
SRM-201ENST00000376957 GRIN3BO60391 1043 aa28.93■■■□□ 2.22
SRM-201ENST00000376957 TGFB2P61812 414 aa28.93■■■□□ 2.22
SRM-201ENST00000376957 EIF4A1P60842 406 aaKnown RBP28.91■■■□□ 2.22
SRM-201ENST00000376957 GIGYF1O75420 1035 aaPredicted RBP28.9■■■□□ 2.22
SRM-201ENST00000376957 CALD1Q05682 793 aaKnown RBP28.9■■■□□ 2.22
SRM-201ENST00000376957 MRS2Q9HD23 443 aa28.9■■■□□ 2.22
SRM-201ENST00000376957 KDM3BQ7LBC6 1761 aa28.9■■■□□ 2.22
SRM-201ENST00000376957 YY1P25490 414 aa28.89■■■□□ 2.22
SRM-201ENST00000376957 TM4SF1P30408 202 aa28.89■■■□□ 2.22
SRM-201ENST00000376957 TBC1D2BQ9UPU7 963 aa28.89■■■□□ 2.22
SRM-201ENST00000376957 PRAMEF22A3QJZ6 481 aa28.88■■■□□ 2.21
SRM-201ENST00000376957 DZIP3Q86Y13 1208 aaKnown RBP28.88■■■□□ 2.21
SRM-201ENST00000376957 ZNF652Q9Y2D9 606 aa28.88■■■□□ 2.21
SRM-201ENST00000376957 LAS1LQ9Y4W2 734 aaKnown RBP28.87■■■□□ 2.21
SRM-201ENST00000376957 POLRMTO00411 1230 aaKnown RBP28.86■■■□□ 2.21
SRM-201ENST00000376957 NFIXQ14938 502 aa28.86■■■□□ 2.21
SRM-201ENST00000376957 APAF1O14727 1248 aa28.85■■■□□ 2.21
SRM-201ENST00000376957 TRIM35Q9UPQ4 493 aa28.85■■■□□ 2.21
SRM-201ENST00000376957 C10orf71Q711Q0 1435 aa28.85■■■□□ 2.21
SRM-201ENST00000376957 LAMB4A4D0S4 1761 aa28.84■■■□□ 2.21
SRM-201ENST00000376957 DDR1Q08345 913 aa28.84■■■□□ 2.21
SRM-201ENST00000376957 KIF13BQ9NQT8 1826 aa28.83■■■□□ 2.21
SRM-201ENST00000376957 CLEC4GQ6UXB4 293 aa28.83■■■□□ 2.21
SRM-201ENST00000376957 BICDL1Q6ZP65 573 aa28.83■■■□□ 2.21
SRM-201ENST00000376957 CHL1O00533 1208 aa28.82■■■□□ 2.2
SRM-201ENST00000376957 NPHP1O15259 732 aa28.82■■■□□ 2.2
SRM-201ENST00000376957 SERPINB2P05120 415 aa28.82■■■□□ 2.2
SRM-201ENST00000376957 SETDB2Q96T68 719 aa28.82■■■□□ 2.2
SRM-201ENST00000376957 BCL2L12Q9HB09 334 aa28.82■■■□□ 2.2
SRM-201ENST00000376957 ERBB4Q15303 1308 aa28.82■■■□□ 2.2
SRM-201ENST00000376957 RGL2O15211 777 aa28.81■■■□□ 2.2
SRM-201ENST00000376957 PIP4K2AP48426 406 aaPredicted RBP28.81■■■□□ 2.2
SRM-201ENST00000376957 CFAP44Q96MT7 982 aa28.8■■■□□ 2.2
SRM-201ENST00000376957 CHD4Q14839 1912 aa28.79■■■□□ 2.2
SRM-201ENST00000376957 CARMIL3Q8ND23 1372 aa28.79■■■□□ 2.2
SRM-201ENST00000376957 A0A0G2JLW4 131 aa28.79■■■□□ 2.2
SRM-201ENST00000376957 CAMTA2O94983 1202 aa28.79■■■□□ 2.2
SRM-201ENST00000376957 YBX3P16989 372 aaKnown RBP eCLIP28.79■■■□□ 2.21e-9■■□□□ 13
SRM-201ENST00000376957 SCN7AQ01118 1682 aa28.79■■■□□ 2.2
SRM-201ENST00000376957 NBPF26B4DH59 902 aa28.78■■■□□ 2.2
SRM-201ENST00000376957 CCDC184Q52MB2 194 aa28.78■■■□□ 2.2
SRM-201ENST00000376957 TBC1D9BQ66K14 1250 aa28.78■■■□□ 2.2
SRM-201ENST00000376957 NBPF10Q6P3W6 841 aaKnown RBP28.78■■■□□ 2.2
SRM-201ENST00000376957 KIF6Q6ZMV9 814 aa28.78■■■□□ 2.2
SRM-201ENST00000376957 NBPF15Q8N660 670 aa28.78■■■□□ 2.2
SRM-201ENST00000376957 EIF2S2P20042 333 aaKnown RBP28.77■■■□□ 2.2
SRM-201ENST00000376957 PXDNLA1KZ92 1463 aa28.77■■■□□ 2.2
SRM-201ENST00000376957 MYL6BP14649 208 aa28.76■■■□□ 2.19
SRM-201ENST00000376957 GNAI1P63096 354 aa28.76■■■□□ 2.19
SRM-201ENST00000376957 NGEFQ8N5V2 710 aa28.76■■■□□ 2.19
SRM-201ENST00000376957 PIM2Q9P1W9 311 aa28.76■■■□□ 2.19
SRM-201ENST00000376957 DPEP1P16444 411 aa28.75■■■□□ 2.19
SRM-201ENST00000376957 PDZRN3Q9UPQ7 1066 aa28.75■■■□□ 2.19
SRM-201ENST00000376957 IFT57Q9NWB7 429 aa28.74■■■□□ 2.19
SRM-201ENST00000376957 WWC3Q9ULE0 1092 aa28.74■■■□□ 2.19
SRM-201ENST00000376957 BCS1LQ9Y276 419 aa28.74■■■□□ 2.19
SRM-201ENST00000376957 ERVV-1B6SEH8 477 aa28.73■■■□□ 2.19
SRM-201ENST00000376957 HOXB7P09629 217 aa28.73■■■□□ 2.19
SRM-201ENST00000376957 ST5P78524 1137 aa28.73■■■□□ 2.19
SRM-201ENST00000376957 CHMP4AQ9BY43 222 aa28.73■■■□□ 2.19
SRM-201ENST00000376957 BCORQ6W2J9 1755 aa28.73■■■□□ 2.19
SRM-201ENST00000376957 N4BP2Q86UW6 1770 aaPredicted RBP28.73■■■□□ 2.19
SRM-201ENST00000376957 CNBD1Q8NA66 436 aa28.72■■■□□ 2.19
SRM-201ENST00000376957 AFDNP55196 1824 aaKnown RBP28.71■■■□□ 2.19
SRM-201ENST00000376957 PDE6BP35913 854 aa28.71■■■□□ 2.19
SRM-201ENST00000376957 NRXN2Q9P2S2 1712 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms