RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 SNRPA1P09661 255 aaKnown RBP22.81■■□□□ 1.24
C6orf48-207ENST00000375642 CALD1Q05682 793 aaKnown RBP22.81■■□□□ 1.24
C6orf48-207ENST00000375642 INTS5Q6P9B9 1019 aaKnown RBP22.81■■□□□ 1.24
C6orf48-207ENST00000375642 SMIM5Q71RC9 77 aa22.81■■□□□ 1.24
C6orf48-207ENST00000375642 AMIGO3Q86WK7 504 aa22.81■■□□□ 1.24
C6orf48-207ENST00000375642 SGIP1Q9BQI5 828 aa22.81■■□□□ 1.24
C6orf48-207ENST00000375642 CCDC87Q9NVE4 849 aa22.81■■□□□ 1.24
C6orf48-207ENST00000375642 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
C6orf48-207ENST00000375642 UBR2Q8IWV8 1755 aa22.81■■□□□ 1.24
C6orf48-207ENST00000375642 GIGYF1O75420 1035 aaPredicted RBP22.8■■□□□ 1.24
C6orf48-207ENST00000375642 GPR162Q16538 588 aa22.8■■□□□ 1.24
C6orf48-207ENST00000375642 TRAPPC3LQ5T215 181 aa22.8■■□□□ 1.24
C6orf48-207ENST00000375642 EIF4A1P60842 406 aaKnown RBP22.79■■□□□ 1.24
C6orf48-207ENST00000375642 NCBP3Q53F19 620 aaKnown RBP22.79■■□□□ 1.24
C6orf48-207ENST00000375642 CHL1O00533 1208 aa22.78■■□□□ 1.24
C6orf48-207ENST00000375642 ADRA2BP18089 450 aa22.78■■□□□ 1.24
C6orf48-207ENST00000375642 TJP1Q07157 1748 aa22.78■■□□□ 1.24
C6orf48-207ENST00000375642 CCDC27Q2M243 656 aa22.78■■□□□ 1.24
C6orf48-207ENST00000375642 IFFO2Q5TF58 517 aa22.78■■□□□ 1.24
C6orf48-207ENST00000375642 CICQ96RK0 1608 aaPredicted RBP22.78■■□□□ 1.24
C6orf48-207ENST00000375642 COL5A3P25940 1745 aaPredicted RBP22.77■■□□□ 1.24
C6orf48-207ENST00000375642 KLHL34Q8N239 644 aa22.77■■□□□ 1.24
C6orf48-207ENST00000375642 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.23
C6orf48-207ENST00000375642 ARHGEF1Q92888 912 aaKnown RBP22.76■■□□□ 1.23
C6orf48-207ENST00000375642 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
C6orf48-207ENST00000375642 ZBTB1Q9Y2K1 713 aa22.76■■□□□ 1.23
C6orf48-207ENST00000375642 USP16Q9Y5T5 823 aa22.76■■□□□ 1.23
C6orf48-207ENST00000375642 PRAMEF22A3QJZ6 481 aa22.75■■□□□ 1.23
C6orf48-207ENST00000375642 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
C6orf48-207ENST00000375642 RFC4P35249 363 aa22.75■■□□□ 1.23
C6orf48-207ENST00000375642 WWC1Q8IX03 1113 aa22.75■■□□□ 1.23
C6orf48-207ENST00000375642 SALL2Q9Y467 1007 aaPredicted RBP22.75■■□□□ 1.23
C6orf48-207ENST00000375642 TUBGCP6Q96RT7 1819 aa22.75■■□□□ 1.23
C6orf48-207ENST00000375642 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
C6orf48-207ENST00000375642 IFT57Q9NWB7 429 aa22.74■■□□□ 1.23
C6orf48-207ENST00000375642 UBR3Q6ZT12 1888 aa22.74■■□□□ 1.23
C6orf48-207ENST00000375642 MYH14Q7Z406 1995 aaKnown RBP22.73■■□□□ 1.23
C6orf48-207ENST00000375642 A1BGP04217 495 aa22.73■■□□□ 1.23
C6orf48-207ENST00000375642 GNAI1P63096 354 aa22.73■■□□□ 1.23
C6orf48-207ENST00000375642 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
C6orf48-207ENST00000375642 SOS1Q07889 1333 aaPredicted RBP22.73■■□□□ 1.23
C6orf48-207ENST00000375642 KDM3BQ7LBC6 1761 aa22.72■■□□□ 1.23
C6orf48-207ENST00000375642 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
C6orf48-207ENST00000375642 POLD1P28340 1107 aa22.72■■□□□ 1.23
C6orf48-207ENST00000375642 MBIPQ9NS73 344 aa22.71■■□□□ 1.23
C6orf48-207ENST00000375642 MSL1Q68DK7 614 aa22.7■■□□□ 1.22
C6orf48-207ENST00000375642 NPM2Q86SE8 214 aaKnown RBP22.7■■□□□ 1.22
C6orf48-207ENST00000375642 IL6STP40189 918 aaPredicted RBP22.69■■□□□ 1.22
C6orf48-207ENST00000375642 EIF5P55010 431 aaKnown RBP22.69■■□□□ 1.22
C6orf48-207ENST00000375642 ZNF330Q9Y3S2 320 aaPredicted RBP22.69■■□□□ 1.22
C6orf48-207ENST00000375642 A0A087WZG4 1122 aa22.68■■□□□ 1.22
C6orf48-207ENST00000375642 WDR63Q8IWG1 891 aa22.68■■□□□ 1.22
C6orf48-207ENST00000375642 COL15A1P39059 1388 aa22.67■■□□□ 1.22
C6orf48-207ENST00000375642 IL16Q14005 1332 aa22.67■■□□□ 1.22
C6orf48-207ENST00000375642 ZPR1O75312 459 aa22.67■■□□□ 1.22
C6orf48-207ENST00000375642 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
C6orf48-207ENST00000375642 PIP4K2AP48426 406 aaPredicted RBP22.66■■□□□ 1.22
C6orf48-207ENST00000375642 KRT24Q2M2I5 525 aa22.66■■□□□ 1.22
C6orf48-207ENST00000375642 NLGN1Q8N2Q7 840 aa22.66■■□□□ 1.22
C6orf48-207ENST00000375642 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
C6orf48-207ENST00000375642 GYS1P13807 737 aa22.65■■□□□ 1.22
C6orf48-207ENST00000375642 NARFQ9UHQ1 456 aa22.65■■□□□ 1.22
C6orf48-207ENST00000375642 NBPF26B4DH59 902 aa22.64■■□□□ 1.21
C6orf48-207ENST00000375642 EIF2S2P20042 333 aaKnown RBP22.64■■□□□ 1.21
C6orf48-207ENST00000375642 NBPF10Q6P3W6 841 aaKnown RBP22.64■■□□□ 1.21
C6orf48-207ENST00000375642 NBPF15Q8N660 670 aa22.64■■□□□ 1.21
C6orf48-207ENST00000375642 USPL1Q5W0Q7 1092 aa22.63■■□□□ 1.21
C6orf48-207ENST00000375642 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
C6orf48-207ENST00000375642 HOXB7P09629 217 aa22.62■■□□□ 1.21
C6orf48-207ENST00000375642 DUSP27Q5VZP5 1158 aa22.62■■□□□ 1.21
C6orf48-207ENST00000375642 TBC1D2BQ9UPU7 963 aa22.62■■□□□ 1.21
C6orf48-207ENST00000375642 ERBB4Q15303 1308 aa22.61■■□□□ 1.21
C6orf48-207ENST00000375642 MMP10P09238 476 aa22.6■■□□□ 1.21
C6orf48-207ENST00000375642 FKBP8Q14318 412 aa22.6■■□□□ 1.21
C6orf48-207ENST00000375642 DZIP3Q86Y13 1208 aaKnown RBP22.6■■□□□ 1.21
C6orf48-207ENST00000375642 ELL2O00472 640 aaPredicted RBP22.59■■□□□ 1.21
C6orf48-207ENST00000375642 GRIN3BO60391 1043 aa22.59■■□□□ 1.21
C6orf48-207ENST00000375642 MYL6BP14649 208 aa22.59■■□□□ 1.21
C6orf48-207ENST00000375642 HDGFL1Q5TGJ6 251 aa22.59■■□□□ 1.21
C6orf48-207ENST00000375642 NECTIN2Q92692 538 aa22.59■■□□□ 1.21
C6orf48-207ENST00000375642 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.21
C6orf48-207ENST00000375642 NLGN2Q8NFZ4 835 aa22.58■■□□□ 1.21
C6orf48-207ENST00000375642 LAMB4A4D0S4 1761 aa22.58■■□□□ 1.2
C6orf48-207ENST00000375642 ZNF521Q96K83 1311 aa22.57■■□□□ 1.2
C6orf48-207ENST00000375642 C4AP0C0L4 1744 aa22.57■■□□□ 1.2
C6orf48-207ENST00000375642 CEP350Q5VT06 3117 aa22.57■■□□□ 1.2
C6orf48-207ENST00000375642 MYH16Q9H6N6 1097 aa22.57■■□□□ 1.2
C6orf48-207ENST00000375642 BCL2L12Q9HB09 334 aa22.57■■□□□ 1.2
C6orf48-207ENST00000375642 COL24A1Q17RW2 1714 aa22.57■■□□□ 1.2
C6orf48-207ENST00000375642 CAMTA2O94983 1202 aa22.56■■□□□ 1.2
C6orf48-207ENST00000375642 GOLGA2Q08379 1002 aa22.56■■□□□ 1.2
C6orf48-207ENST00000375642 PDIA6Q15084 440 aa22.56■■□□□ 1.2
C6orf48-207ENST00000375642 CHMP4AQ9BY43 222 aa22.56■■□□□ 1.2
C6orf48-207ENST00000375642 FANCIQ9NVI1 1328 aa22.56■■□□□ 1.2
C6orf48-207ENST00000375642 SPINK5Q9NQ38 1064 aaPredicted RBP22.55■■□□□ 1.2
C6orf48-207ENST00000375642 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
C6orf48-207ENST00000375642 PARP3Q9Y6F1 533 aa22.55■■□□□ 1.2
C6orf48-207ENST00000375642 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
C6orf48-207ENST00000375642 TM4SF1P30408 202 aa22.54■■□□□ 1.2
C6orf48-207ENST00000375642 PROSER3Q2NL68 480 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms