RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 TWISTNBQ3B726 338 aaPredicted RBP22.87■■□□□ 1.25
C6orf48-204ENST00000375639 RREB1Q92766 1687 aa22.87■■□□□ 1.25
C6orf48-204ENST00000375639 NECTIN2Q92692 538 aa22.86■■□□□ 1.25
C6orf48-204ENST00000375639 C5P01031 1676 aa22.86■■□□□ 1.25
C6orf48-204ENST00000375639 TAF1LQ8IZX4 1826 aa22.85■■□□□ 1.25
C6orf48-204ENST00000375639 HOXB7P09629 217 aa22.85■■□□□ 1.25
C6orf48-204ENST00000375639 CRKLP46109 303 aaKnown RBP22.85■■□□□ 1.25
C6orf48-204ENST00000375639 HDGFL1Q5TGJ6 251 aa22.84■■□□□ 1.25
C6orf48-204ENST00000375639 AK7Q96M32 723 aa22.84■■□□□ 1.25
C6orf48-204ENST00000375639 CCDC87Q9NVE4 849 aa22.84■■□□□ 1.25
C6orf48-204ENST00000375639 NUP188Q5SRE5 1749 aa22.84■■□□□ 1.25
C6orf48-204ENST00000375639 SOS1Q07889 1333 aaPredicted RBP22.83■■□□□ 1.25
C6orf48-204ENST00000375639 CICQ96RK0 1608 aaPredicted RBP22.83■■□□□ 1.25
C6orf48-204ENST00000375639 A1BGP04217 495 aa22.83■■□□□ 1.25
C6orf48-204ENST00000375639 RC3H1Q5TC82 1133 aaKnown RBP22.83■■□□□ 1.25
C6orf48-204ENST00000375639 NBPF14Q5TI25 921 aa22.83■■□□□ 1.25
C6orf48-204ENST00000375639 CNTNAP4Q9C0A0 1308 aa22.82■■□□□ 1.24
C6orf48-204ENST00000375639 COL5A3P25940 1745 aaPredicted RBP22.82■■□□□ 1.24
C6orf48-204ENST00000375639 VAMP4O75379 141 aa22.82■■□□□ 1.24
C6orf48-204ENST00000375639 CANXP27824 592 aaKnown RBP22.82■■□□□ 1.24
C6orf48-204ENST00000375639 INTS5Q6P9B9 1019 aaKnown RBP22.82■■□□□ 1.24
C6orf48-204ENST00000375639 STK32BQ9NY57 414 aa22.82■■□□□ 1.24
C6orf48-204ENST00000375639 C4BP0C0L5 1744 aa22.82■■□□□ 1.24
C6orf48-204ENST00000375639 DCAF8L1A6NGE4 600 aa22.81■■□□□ 1.24
C6orf48-204ENST00000375639 GNPATO15228 680 aa22.81■■□□□ 1.24
C6orf48-204ENST00000375639 PIP4K2AP48426 406 aaPredicted RBP22.81■■□□□ 1.24
C6orf48-204ENST00000375639 ZNF827Q17R98 1081 aa22.81■■□□□ 1.24
C6orf48-204ENST00000375639 ANO8Q9HCE9 1232 aaPredicted RBP22.81■■□□□ 1.24
C6orf48-204ENST00000375639 ZBTB1Q9Y2K1 713 aa22.81■■□□□ 1.24
C6orf48-204ENST00000375639 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
C6orf48-204ENST00000375639 AKT1S1Q96B36 256 aa22.8■■□□□ 1.24
C6orf48-204ENST00000375639 CHMP4AQ9BY43 222 aa22.8■■□□□ 1.24
C6orf48-204ENST00000375639 TFCP2L1Q9NZI6 479 aa22.8■■□□□ 1.24
C6orf48-204ENST00000375639 TCERG1O14776 1098 aaKnown RBP22.79■■□□□ 1.24
C6orf48-204ENST00000375639 SLC15A2Q16348 729 aa22.79■■□□□ 1.24
C6orf48-204ENST00000375639 CCDC30Q5VVM6 783 aa22.79■■□□□ 1.24
C6orf48-204ENST00000375639 PPP1R1BQ9UD71 204 aaPredicted RBP22.79■■□□□ 1.24
C6orf48-204ENST00000375639 MYH14Q7Z406 1995 aaKnown RBP22.79■■□□□ 1.24
C6orf48-204ENST00000375639 RPS6KA4O75676 772 aa22.78■■□□□ 1.24
C6orf48-204ENST00000375639 SPON1Q9HCB6 807 aa22.78■■□□□ 1.24
C6orf48-204ENST00000375639 RTCBQ9Y3I0 505 aaKnown RBP22.78■■□□□ 1.24
C6orf48-204ENST00000375639 ZNF330Q9Y3S2 320 aaPredicted RBP22.78■■□□□ 1.24
C6orf48-204ENST00000375639 NBPF26B4DH59 902 aa22.77■■□□□ 1.24
C6orf48-204ENST00000375639 MYL6BP14649 208 aa22.77■■□□□ 1.24
C6orf48-204ENST00000375639 NBPF10Q6P3W6 841 aaKnown RBP22.77■■□□□ 1.24
C6orf48-204ENST00000375639 SMIM5Q71RC9 77 aa22.77■■□□□ 1.24
C6orf48-204ENST00000375639 NBPF15Q8N660 670 aa22.77■■□□□ 1.24
C6orf48-204ENST00000375639 CHPF2Q9P2E5 772 aa22.77■■□□□ 1.24
C6orf48-204ENST00000375639 ERBB4Q15303 1308 aa22.77■■□□□ 1.24
C6orf48-204ENST00000375639 PHF14O94880 888 aa22.76■■□□□ 1.23
C6orf48-204ENST00000375639 ANXA1P04083 346 aa22.76■■□□□ 1.23
C6orf48-204ENST00000375639 CT47B1P0C2W7 299 aaPredicted RBP22.76■■□□□ 1.23
C6orf48-204ENST00000375639 NPM2Q86SE8 214 aaKnown RBP22.76■■□□□ 1.23
C6orf48-204ENST00000375639 STK31Q9BXU1 1019 aa22.76■■□□□ 1.23
C6orf48-204ENST00000375639 DBF4Q9UBU7 674 aaPredicted RBP22.76■■□□□ 1.23
C6orf48-204ENST00000375639 IL6STP40189 918 aaPredicted RBP22.75■■□□□ 1.23
C6orf48-204ENST00000375639 DDX21Q9NR30 783 aaKnown RBP eCLIP22.75■■□□□ 1.23
C6orf48-204ENST00000375639 PDIA6Q15084 440 aa22.74■■□□□ 1.23
C6orf48-204ENST00000375639 PROSER3Q2NL68 480 aa22.74■■□□□ 1.23
C6orf48-204ENST00000375639 AMIGO3Q86WK7 504 aa22.74■■□□□ 1.23
C6orf48-204ENST00000375639 ARXQ96QS3 562 aa22.74■■□□□ 1.23
C6orf48-204ENST00000375639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.73■■□□□ 1.23
C6orf48-204ENST00000375639 EIF5P55010 431 aaKnown RBP22.73■■□□□ 1.23
C6orf48-204ENST00000375639 TRAPPC3LQ5T215 181 aa22.73■■□□□ 1.23
C6orf48-204ENST00000375639 SSFA2P28290 1259 aa22.72■■□□□ 1.23
C6orf48-204ENST00000375639 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
C6orf48-204ENST00000375639 MSH5O43196 834 aa22.71■■□□□ 1.23
C6orf48-204ENST00000375639 SLC4A2P04920 1241 aa22.71■■□□□ 1.23
C6orf48-204ENST00000375639 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
C6orf48-204ENST00000375639 FLAD1Q8NFF5 587 aa22.71■■□□□ 1.23
C6orf48-204ENST00000375639 HYPKQ9NX55 129 aa22.71■■□□□ 1.23
C6orf48-204ENST00000375639 COL15A1P39059 1388 aa22.71■■□□□ 1.23
C6orf48-204ENST00000375639 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
C6orf48-204ENST00000375639 ADRA2BP18089 450 aa22.7■■□□□ 1.22
C6orf48-204ENST00000375639 SSH1Q8WYL5 1049 aa22.7■■□□□ 1.22
C6orf48-204ENST00000375639 ARHGEF1Q92888 912 aaKnown RBP22.7■■□□□ 1.22
C6orf48-204ENST00000375639 PNPLA7Q6ZV29 1317 aa22.7■■□□□ 1.22
C6orf48-204ENST00000375639 A0A087WZG4 1122 aa22.69■■□□□ 1.22
C6orf48-204ENST00000375639 RFC4P35249 363 aa22.69■■□□□ 1.22
C6orf48-204ENST00000375639 AIMP1Q12904 312 aaKnown RBP22.69■■□□□ 1.22
C6orf48-204ENST00000375639 COL23A1Q86Y22 540 aaPredicted RBP22.69■■□□□ 1.22
C6orf48-204ENST00000375639 BCL2L13Q9BXK5 485 aa22.69■■□□□ 1.22
C6orf48-204ENST00000375639 TBC1D2BQ9UPU7 963 aa22.69■■□□□ 1.22
C6orf48-204ENST00000375639 ALDH1L2Q3SY69 923 aa22.68■■□□□ 1.22
C6orf48-204ENST00000375639 IFFO2Q5TF58 517 aa22.68■■□□□ 1.22
C6orf48-204ENST00000375639 COPS6Q7L5N1 327 aa22.68■■□□□ 1.22
C6orf48-204ENST00000375639 LRP10Q7Z4F1 713 aa22.68■■□□□ 1.22
C6orf48-204ENST00000375639 XAGE3Q8WTP9 111 aa22.68■■□□□ 1.22
C6orf48-204ENST00000375639 PHAXQ9H814 394 aaKnown RBP22.68■■□□□ 1.22
C6orf48-204ENST00000375639 SMC4Q9NTJ3 1288 aa22.68■■□□□ 1.22
C6orf48-204ENST00000375639 TUBGCP6Q96RT7 1819 aa22.67■■□□□ 1.22
C6orf48-204ENST00000375639 RARSP54136 660 aaKnown RBP22.67■■□□□ 1.22
C6orf48-204ENST00000375639 TTLL7Q6ZT98 887 aa22.67■■□□□ 1.22
C6orf48-204ENST00000375639 DZIP3Q86Y13 1208 aaKnown RBP22.67■■□□□ 1.22
C6orf48-204ENST00000375639 G2E3Q7L622 706 aa22.66■■□□□ 1.22
C6orf48-204ENST00000375639 MRPL50Q8N5N7 158 aaKnown RBP22.66■■□□□ 1.22
C6orf48-204ENST00000375639 ZPR1O75312 459 aa22.65■■□□□ 1.22
C6orf48-204ENST00000375639 KIF6Q6ZMV9 814 aa22.65■■□□□ 1.22
C6orf48-204ENST00000375639 PDGFDQ9GZP0 370 aaPredicted RBP22.64■■□□□ 1.21
C6orf48-204ENST00000375639 SRP68Q9UHB9 627 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms