RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 FRMPD1Q5SYB0 1578 aa14.17□□□□□ -0.14
MCF2L-202ENST00000375597 NCOA3Q9Y6Q9 1424 aa14.17□□□□□ -0.14
MCF2L-202ENST00000375597 CHGBP05060 677 aa14.17□□□□□ -0.14
MCF2L-202ENST00000375597 RAB11FIP4Q86YS3 637 aa14.17□□□□□ -0.14
MCF2L-202ENST00000375597 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
MCF2L-202ENST00000375597 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
MCF2L-202ENST00000375597 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
MCF2L-202ENST00000375597 PRAMEF22A3QJZ6 481 aa14.16□□□□□ -0.14
MCF2L-202ENST00000375597 SYT1P21579 422 aa14.16□□□□□ -0.14
MCF2L-202ENST00000375597 HAP1P54257 671 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-202ENST00000375597 GUCY1B3Q02153 619 aa14.16□□□□□ -0.14
MCF2L-202ENST00000375597 TEFQ10587 303 aa14.16□□□□□ -0.14
MCF2L-202ENST00000375597 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-202ENST00000375597 AACSQ86V21 672 aa14.16□□□□□ -0.14
MCF2L-202ENST00000375597 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-202ENST00000375597 PDCL3Q9H2J4 239 aa14.16□□□□□ -0.14
MCF2L-202ENST00000375597 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.16□□□□□ -0.144e-7■■□□□ 14
MCF2L-202ENST00000375597 V9GYY5 206 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-202ENST00000375597 SOS1Q07889 1333 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-202ENST00000375597 BICD2Q8TD16 824 aa14.16□□□□□ -0.14
MCF2L-202ENST00000375597 ARHGEF28Q8N1W1 1705 aaKnown RBP14.16□□□□□ -0.14
MCF2L-202ENST00000375597 STX6O43752 255 aa14.15□□□□□ -0.14
MCF2L-202ENST00000375597 PTH1RQ03431 593 aa14.15□□□□□ -0.14
MCF2L-202ENST00000375597 RHPN1Q8TCX5 695 aa14.15□□□□□ -0.14
MCF2L-202ENST00000375597 C16orf45Q96MC5 204 aaPredicted RBP14.15□□□□□ -0.14
MCF2L-202ENST00000375597 ZMYM3Q14202 1370 aa14.15□□□□□ -0.14
MCF2L-202ENST00000375597 BRD1O95696 1058 aa14.15□□□□□ -0.14
MCF2L-202ENST00000375597 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
MCF2L-202ENST00000375597 USP44Q9H0E7 712 aa14.15□□□□□ -0.14
MCF2L-202ENST00000375597 LUZP1Q86V48 1076 aa14.15□□□□□ -0.14
MCF2L-202ENST00000375597 FAM227BQ96M60 508 aa14.15□□□□□ -0.14
MCF2L-202ENST00000375597 DNAJC2Q99543 621 aaKnown RBP14.15□□□□□ -0.14
MCF2L-202ENST00000375597 WDR33Q9C0J8 1336 aaKnown RBP14.15□□□□□ -0.14
MCF2L-202ENST00000375597 ADGRB2O60241 1585 aa14.14□□□□□ -0.15
MCF2L-202ENST00000375597 CD163L1Q9NR16 1453 aa14.14□□□□□ -0.15
MCF2L-202ENST00000375597 A0A0G2JS52 829 aa14.14□□□□□ -0.15
MCF2L-202ENST00000375597 GNAT3A8MTJ3 354 aa14.14□□□□□ -0.15
MCF2L-202ENST00000375597 CYP2E1P05181 493 aaPredicted RBP14.14□□□□□ -0.15
MCF2L-202ENST00000375597 LARP1BQ659C4 914 aaKnown RBP14.14□□□□□ -0.15
MCF2L-202ENST00000375597 FMNL2Q96PY5 1086 aa14.14□□□□□ -0.15
MCF2L-202ENST00000375597 PUS7Q96PZ0 661 aaKnown RBP14.14□□□□□ -0.15
MCF2L-202ENST00000375597 PDRG1Q9NUG6 133 aa14.14□□□□□ -0.15
MCF2L-202ENST00000375597 ABCC3O15438 1527 aa14.14□□□□□ -0.15
MCF2L-202ENST00000375597 CCDC85AQ96PX6 553 aaPredicted RBP14.13□□□□□ -0.15
MCF2L-202ENST00000375597 FSD1Q9BTV5 496 aa14.13□□□□□ -0.15
MCF2L-202ENST00000375597 PTCH1Q13635 1447 aa14.13□□□□□ -0.15
MCF2L-202ENST00000375597 SNX14Q9Y5W7 946 aa14.13□□□□□ -0.15
MCF2L-202ENST00000375597 SETD1BQ9UPS6 1966 aaKnown RBP14.13□□□□□ -0.15
MCF2L-202ENST00000375597 COL3A1P02461 1466 aaPredicted RBP14.13□□□□□ -0.15
MCF2L-202ENST00000375597 PIK3C2BO00750 1634 aa14.13□□□□□ -0.15
MCF2L-202ENST00000375597 PTPRCP08575 1304 aa14.13□□□□□ -0.15
MCF2L-202ENST00000375597 CNTROBQ8N137 903 aa14.13□□□□□ -0.15
MCF2L-202ENST00000375597 IL17REQ8NFR9 667 aa14.13□□□□□ -0.15
MCF2L-202ENST00000375597 ATP10DQ9P241 1426 aa14.13□□□□□ -0.15
MCF2L-202ENST00000375597 RAB11FIP3O75154 756 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 PHF14O94880 888 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 ATP8B2P98198 1209 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 LRMPQ12912 555 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 SLFNL1Q499Z3 407 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 TRIM5Q9C035 493 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 SLC39A6Q13433 755 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 NOLC1Q14978 699 aaKnown RBP eCLIP14.12□□□□□ -0.153e-6■■■■■ 34
MCF2L-202ENST00000375597 RUFY3Q7L099 469 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 CLASRPQ8N2M8 674 aaKnown RBP14.12□□□□□ -0.15
MCF2L-202ENST00000375597 PNPLA6Q8IY17 1366 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 PTGS1P23219 599 aa14.12□□□□□ -0.15
MCF2L-202ENST00000375597 CHST3Q7LGC8 479 aa14.11□□□□□ -0.15
MCF2L-202ENST00000375597 ZSCAN22P10073 491 aaPredicted RBP14.11□□□□□ -0.15
MCF2L-202ENST00000375597 NAA30Q147X3 362 aaPredicted RBP14.11□□□□□ -0.15
MCF2L-202ENST00000375597 PYCARDQ9ULZ3 195 aa14.11□□□□□ -0.15
MCF2L-202ENST00000375597 AMOTL2Q9Y2J4 779 aa14.11□□□□□ -0.15
MCF2L-202ENST00000375597 TAF6LQ9Y6J9 622 aa14.11□□□□□ -0.15
MCF2L-202ENST00000375597 PROSER3Q2NL68 480 aa14.11□□□□□ -0.15
MCF2L-202ENST00000375597 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
MCF2L-202ENST00000375597 SIGLEC1Q9BZZ2 1709 aa14.1□□□□□ -0.15
MCF2L-202ENST00000375597 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
MCF2L-202ENST00000375597 SASS6Q6UVJ0 657 aa14.1□□□□□ -0.15
MCF2L-202ENST00000375597 CCDC129Q6ZRS4 1044 aa14.1□□□□□ -0.15
MCF2L-202ENST00000375597 FILIP1Q7Z7B0 1213 aa14.1□□□□□ -0.15
MCF2L-202ENST00000375597 CHAF1AQ13111 956 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-202ENST00000375597 ISM2Q6H9L7 571 aa14.1□□□□□ -0.15
MCF2L-202ENST00000375597 ZNF530Q6P9A1 599 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-202ENST00000375597 TRMT1Q9NXH9 659 aaKnown RBP14.1□□□□□ -0.15
MCF2L-202ENST00000375597 NRBP1Q9UHY1 535 aa14.1□□□□□ -0.15
MCF2L-202ENST00000375597 PTPRMP28827 1452 aa14.1□□□□□ -0.15
MCF2L-202ENST00000375597 CCDC183Q5T5S1 534 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 TLR7Q9NYK1 1049 aaKnown RBP14.09□□□□□ -0.15
MCF2L-202ENST00000375597 LIMCH1Q9UPQ0 1083 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 CPS1P31327 1500 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 H3BQV1 296 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 ZKSCAN1P17029 563 aaPredicted RBP14.09□□□□□ -0.15
MCF2L-202ENST00000375597 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 IFFO2Q5TF58 517 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 CDC37L1Q7L3B6 337 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 MAP3K2Q9Y2U5 619 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 CYP46A1Q9Y6A2 500 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 ZFYVE9O95405 1425 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 LIG1P18858 919 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 LTKP29376 864 aa14.09□□□□□ -0.15
MCF2L-202ENST00000375597 TSPOAP1O95153 1857 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms