RNA–Protein interactions for RNA: ENST00000374706.5

CCNY-204, Transcript of cyclin Y, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNY, Length 3,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-204ENST00000374706 PCDH11XQ9BZA7 1347 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 PCDH11YQ9BZA8 1340 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 ZBTB40Q9NUA8 1239 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCNY-204ENST00000374706 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 TSPYL6Q8N831 410 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 CPDO75976 1380 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 TMOD3Q9NYL9 352 aa12.53□□□□□ -0.4
CCNY-204ENST00000374706 VAMP4O75379 141 aa12.52□□□□□ -0.41
CCNY-204ENST00000374706 KRT24Q2M2I5 525 aa12.52□□□□□ -0.41
CCNY-204ENST00000374706 DDB1Q16531 1140 aa12.52□□□□□ -0.41
CCNY-204ENST00000374706 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.41
CCNY-204ENST00000374706 C1orf115Q9H7X2 142 aa12.52□□□□□ -0.41
CCNY-204ENST00000374706 PTMAP06454 111 aaKnown RBP12.51□□□□□ -0.41
CCNY-204ENST00000374706 TERF1P54274 439 aa12.51□□□□□ -0.41
CCNY-204ENST00000374706 NUCB2P80303 420 aa12.51□□□□□ -0.41
CCNY-204ENST00000374706 KIF2CQ99661 725 aa12.51□□□□□ -0.41
CCNY-204ENST00000374706 NFATC2IPQ8NCF5 419 aa12.51□□□□□ -0.41
CCNY-204ENST00000374706 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
CCNY-204ENST00000374706 PXDNQ92626 1479 aa12.51□□□□□ -0.41
CCNY-204ENST00000374706 DDX58O95786 925 aaKnown RBP12.51□□□□□ -0.41
CCNY-204ENST00000374706 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
CCNY-204ENST00000374706 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
CCNY-204ENST00000374706 PHKG2P15735 406 aa12.5□□□□□ -0.41
CCNY-204ENST00000374706 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
CCNY-204ENST00000374706 RBSNQ9H1K0 784 aa12.5□□□□□ -0.41
CCNY-204ENST00000374706 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
CCNY-204ENST00000374706 JCADQ9P266 1359 aa12.5□□□□□ -0.41
CCNY-204ENST00000374706 PRPF40AO75400 957 aaKnown RBP12.5□□□□□ -0.41
CCNY-204ENST00000374706 CDC45O75419 566 aa12.5□□□□□ -0.41
CCNY-204ENST00000374706 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
CCNY-204ENST00000374706 HS1BP3Q53T59 392 aa12.5□□□□□ -0.41
CCNY-204ENST00000374706 IBTKQ9P2D0 1353 aaPredicted RBP12.49□□□□□ -0.41
CCNY-204ENST00000374706 SHPRHQ149N8 1683 aa12.49□□□□□ -0.41
CCNY-204ENST00000374706 NRKQ7Z2Y5 1582 aa12.49□□□□□ -0.41
CCNY-204ENST00000374706 ZNF445P59923 1031 aa12.49□□□□□ -0.41
CCNY-204ENST00000374706 DNTTIP2Q5QJE6 756 aaKnown RBP12.49□□□□□ -0.41
CCNY-204ENST00000374706 AIMP1Q12904 312 aaKnown RBP12.49□□□□□ -0.41
CCNY-204ENST00000374706 GCC1Q96CN9 775 aa12.49□□□□□ -0.41
CCNY-204ENST00000374706 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
CCNY-204ENST00000374706 PRIM1P49642 420 aaKnown RBP12.48□□□□□ -0.41
CCNY-204ENST00000374706 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
CCNY-204ENST00000374706 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
CCNY-204ENST00000374706 ZNF853P0CG23 659 aa12.48□□□□□ -0.41
CCNY-204ENST00000374706 USP21Q9UK80 565 aa12.48□□□□□ -0.41
CCNY-204ENST00000374706 NEXNQ0ZGT2 675 aa12.48□□□□□ -0.41
CCNY-204ENST00000374706 RABEP1Q15276 862 aa12.48□□□□□ -0.41
CCNY-204ENST00000374706 MTERF4Q7Z6M4 381 aaKnown RBP12.48□□□□□ -0.41
CCNY-204ENST00000374706 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
CCNY-204ENST00000374706 FOXD4L5Q5VV16 416 aaPredicted RBP12.47□□□□□ -0.41
CCNY-204ENST00000374706 FOXD4L4Q8WXT5 416 aaPredicted RBP12.47□□□□□ -0.41
CCNY-204ENST00000374706 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
CCNY-204ENST00000374706 CCDC39Q9UFE4 941 aa12.47□□□□□ -0.41
CCNY-204ENST00000374706 ZNF500O60304 480 aaPredicted RBP12.47□□□□□ -0.41
CCNY-204ENST00000374706 HDAC5Q9UQL6 1122 aa12.47□□□□□ -0.41
CCNY-204ENST00000374706 ZKSCAN5Q9Y2L8 839 aa12.47□□□□□ -0.41
CCNY-204ENST00000374706 RNF214Q8ND24 703 aa12.46□□□□□ -0.41
CCNY-204ENST00000374706 LMBRD1Q9NUN5 540 aa12.46□□□□□ -0.41
CCNY-204ENST00000374706 NFAT5O94916 1531 aa12.46□□□□□ -0.41
CCNY-204ENST00000374706 DYNC1I1O14576 645 aa12.46□□□□□ -0.41
CCNY-204ENST00000374706 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.41
CCNY-204ENST00000374706 PRDM10Q9NQV6 1147 aa12.46□□□□□ -0.41
CCNY-204ENST00000374706 DBF4Q9UBU7 674 aaPredicted RBP12.46□□□□□ -0.41
CCNY-204ENST00000374706 SLIT3O75094 1523 aa12.46□□□□□ -0.41
CCNY-204ENST00000374706 HSPA1LP34931 641 aa12.46□□□□□ -0.42
CCNY-204ENST00000374706 SNRPA1P09661 255 aaKnown RBP12.45□□□□□ -0.42
CCNY-204ENST00000374706 MYL6BP14649 208 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 FAM98CQ17RN3 349 aaKnown RBP12.45□□□□□ -0.42
CCNY-204ENST00000374706 ZNF790Q6PG37 636 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
CCNY-204ENST00000374706 SYCE3A1L190 88 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 SASS6Q6UVJ0 657 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 CLEC17AQ6ZS10 378 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 SOS1Q07889 1333 aaPredicted RBP12.45□□□□□ -0.42
CCNY-204ENST00000374706 CRB1P82279 1406 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 CYP27B1O15528 508 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 ST18O60284 1047 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 FLIIQ13045 1269 aa12.45□□□□□ -0.42
CCNY-204ENST00000374706 HMMRO75330 724 aa12.44□□□□□ -0.42
CCNY-204ENST00000374706 PDIA4P13667 645 aaKnown RBP12.44□□□□□ -0.42
CCNY-204ENST00000374706 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
CCNY-204ENST00000374706 ARHGAP45Q92619 1136 aa12.44□□□□□ -0.42
CCNY-204ENST00000374706 AK9Q5TCS8 1911 aa12.44□□□□□ -0.42
CCNY-204ENST00000374706 PKP1Q13835 747 aa12.44□□□□□ -0.42
CCNY-204ENST00000374706 PTPRCP08575 1304 aa12.44□□□□□ -0.42
CCNY-204ENST00000374706 CCT4P50991 539 aaKnown RBP12.44□□□□□ -0.42
CCNY-204ENST00000374706 C9orf78Q9NZ63 289 aaPredicted RBP12.44□□□□□ -0.42
CCNY-204ENST00000374706 CASC1Q6TDU7 716 aa12.43□□□□□ -0.42
CCNY-204ENST00000374706 PRDM4Q9UKN5 801 aa12.43□□□□□ -0.42
CCNY-204ENST00000374706 SPATA31A6Q5VVP1 1343 aa12.43□□□□□ -0.42
CCNY-204ENST00000374706 ERVV-2B6SEH9 535 aa12.43□□□□□ -0.42
CCNY-204ENST00000374706 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
CCNY-204ENST00000374706 HOXB7P09629 217 aa12.43□□□□□ -0.42
CCNY-204ENST00000374706 MCM5P33992 734 aa12.43□□□□□ -0.42
CCNY-204ENST00000374706 PDLIM2Q96JY6 352 aa12.43□□□□□ -0.42
CCNY-204ENST00000374706 CWC22Q9HCG8 908 aaKnown RBP12.43□□□□□ -0.42
CCNY-204ENST00000374706 NCAPD2Q15021 1401 aa12.43□□□□□ -0.42
CCNY-204ENST00000374706 KCNQ3O43525 872 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms