RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 NUTM2AQ8IVF1 878 aaPredicted RBP14.21□□□□□ -0.14
PACSIN1-202ENST00000374043 ESYT1Q9BSJ8 1104 aa14.21□□□□□ -0.14
PACSIN1-202ENST00000374043 USP6P35125 1406 aa14.21□□□□□ -0.14
PACSIN1-202ENST00000374043 GNL2Q13823 731 aaKnown RBP14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 USP44Q9H0E7 712 aa14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 RTL1A6NKG5 1358 aa14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 TMX3Q96JJ7 454 aa14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 GLRX3O76003 335 aaKnown RBP14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 SYCE3A1L190 88 aa14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 RNMTO43148 476 aaKnown RBP14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 CIZ1Q9ULV3 898 aaPredicted RBP14.2□□□□□ -0.14
PACSIN1-202ENST00000374043 RNF20Q5VTR2 975 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 LARP1Q6PKG0 1096 aaKnown RBP14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 SETD1BQ9UPS6 1966 aaKnown RBP14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 CAMSAP1Q5T5Y3 1602 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 GPTP24298 496 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 SNRKQ9NRH2 765 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 AATKQ6ZMQ8 1374 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 ARHGEF40Q8TER5 1519 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 XRCC6P12956 609 aaKnown RBP eCLIP14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 PKP1Q13835 747 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 CYP46A1Q9Y6A2 500 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 ATP7BP35670 1465 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 MROH1Q8NDA8 1641 aa14.19□□□□□ -0.14
PACSIN1-202ENST00000374043 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 DDX11Q96FC9 970 aa14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 PNPLA6Q8IY17 1366 aa14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 PDRG1Q9NUG6 133 aa14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 NRXN1Q9ULB1 1477 aa14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 UNC5CLQ8IV45 518 aa14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 NECAB1Q8N987 351 aa14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 ECHDC1Q9NTX5 307 aa14.18□□□□□ -0.14
PACSIN1-202ENST00000374043 RAB11FIP3O75154 756 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 EIF4A1P60842 406 aaKnown RBP14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 ANKRD13DQ6ZTN6 518 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 BCL11BQ9C0K0 894 aaPredicted RBP14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 PIK3C2BO00750 1634 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 CHMLP26374 656 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 SETBP1Q9Y6X0 1596 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 GRM8O00222 908 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 KSR2Q6VAB6 950 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 BICD2Q8TD16 824 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 C19orf44Q9H6X5 657 aa14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 CWC22Q9HCG8 908 aaKnown RBP14.17□□□□□ -0.14
PACSIN1-202ENST00000374043 PLEKHG1Q9ULL1 1385 aa14.16□□□□□ -0.14
PACSIN1-202ENST00000374043 ADAMTS2O95450 1211 aa14.16□□□□□ -0.14
PACSIN1-202ENST00000374043 DDX46Q7L014 1031 aaKnown RBP14.16□□□□□ -0.14
PACSIN1-202ENST00000374043 LRRC7Q96NW7 1537 aa14.16□□□□□ -0.14
PACSIN1-202ENST00000374043 HTATSF1O43719 755 aaKnown RBP14.16□□□□□ -0.14
PACSIN1-202ENST00000374043 LRRC2Q9BYS8 371 aa14.16□□□□□ -0.14
PACSIN1-202ENST00000374043 CPS1P31327 1500 aa14.16□□□□□ -0.14
PACSIN1-202ENST00000374043 BICC1Q9H694 974 aaKnown RBP14.16□□□□□ -0.14
PACSIN1-202ENST00000374043 SNX21Q969T3 373 aa14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 PALD1Q9ULE6 856 aa14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 EDC3Q96F86 508 aaKnown RBP14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 MCM2P49736 904 aa14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 BLOC1S2Q6QNY1 142 aa14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 FMNL2Q96PY5 1086 aa14.15□□□□□ -0.14
PACSIN1-202ENST00000374043 SF3A1Q15459 793 aaKnown RBP14.14□□□□□ -0.15
PACSIN1-202ENST00000374043 LARP1BQ659C4 914 aaKnown RBP14.14□□□□□ -0.15
PACSIN1-202ENST00000374043 ZNF496Q96IT1 587 aaPredicted RBP14.14□□□□□ -0.15
PACSIN1-202ENST00000374043 ATP6V1DQ9Y5K8 247 aa14.14□□□□□ -0.15
PACSIN1-202ENST00000374043 LMBR1LQ6UX01 489 aa14.14□□□□□ -0.15
PACSIN1-202ENST00000374043 CHMP4CQ96CF2 233 aa14.14□□□□□ -0.15
PACSIN1-202ENST00000374043 NLRP1Q9C000 1473 aa14.13□□□□□ -0.15
PACSIN1-202ENST00000374043 CCDC57Q2TAC2 916 aa14.13□□□□□ -0.15
PACSIN1-202ENST00000374043 USP16Q9Y5T5 823 aa14.13□□□□□ -0.15
PACSIN1-202ENST00000374043 RAB11FIP4Q86YS3 637 aa14.13□□□□□ -0.15
PACSIN1-202ENST00000374043 CNNM1Q9NRU3 951 aa14.13□□□□□ -0.15
PACSIN1-202ENST00000374043 SNRPA1P09661 255 aaKnown RBP14.13□□□□□ -0.15
PACSIN1-202ENST00000374043 ZNF790Q6PG37 636 aa14.13□□□□□ -0.15
PACSIN1-202ENST00000374043 AXIN2Q9Y2T1 843 aa14.13□□□□□ -0.15
PACSIN1-202ENST00000374043 GOLIM4O00461 696 aa14.12□□□□□ -0.15
PACSIN1-202ENST00000374043 RAB3GAP1Q15042 981 aa14.12□□□□□ -0.15
PACSIN1-202ENST00000374043 ARHGEF10O15013 1369 aa14.12□□□□□ -0.15
PACSIN1-202ENST00000374043 PIP4K2BP78356 416 aa14.12□□□□□ -0.15
PACSIN1-202ENST00000374043 ANTXR1Q9H6X2 564 aa14.12□□□□□ -0.15
PACSIN1-202ENST00000374043 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
PACSIN1-202ENST00000374043 SUCLG2Q96I99 432 aa14.12□□□□□ -0.15
PACSIN1-202ENST00000374043 TFIP11Q9UBB9 837 aaKnown RBP14.12□□□□□ -0.15
PACSIN1-202ENST00000374043 KIAA0232Q92628 1395 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 DEPDC5O75140 1603 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 LINS1Q8NG48 757 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 CEP126Q9P2H0 1117 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 CPLX1O14810 134 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 PHF14O94880 888 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 PSMA5P28066 241 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 GUCY1B3Q02153 619 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 KIAA2012Q0VF49 1180 aa14.11□□□□□ -0.15
PACSIN1-202ENST00000374043 CPSF1Q10570 1443 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms