RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 STK31Q9BXU1 1019 aa18.75■□□□□ 0.59
SMPDL3B-201ENST00000373888 KIF16BQ96L93 1317 aa18.75■□□□□ 0.59
SMPDL3B-201ENST00000373888 RRP1P56182 461 aaKnown RBP18.74■□□□□ 0.59
SMPDL3B-201ENST00000373888 DNAJC10Q8IXB1 793 aa18.74■□□□□ 0.59
SMPDL3B-201ENST00000373888 ERBB4Q15303 1308 aa18.74■□□□□ 0.59
SMPDL3B-201ENST00000373888 TNS1Q9HBL0 1735 aaKnown RBP18.74■□□□□ 0.59
SMPDL3B-201ENST00000373888 CHPF2Q9P2E5 772 aa18.74■□□□□ 0.59
SMPDL3B-201ENST00000373888 DBF4Q9UBU7 674 aaPredicted RBP18.74■□□□□ 0.59
SMPDL3B-201ENST00000373888 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
SMPDL3B-201ENST00000373888 ATP6V1AP38606 617 aa18.73■□□□□ 0.59
SMPDL3B-201ENST00000373888 STARD3NLO95772 234 aa18.72■□□□□ 0.59
SMPDL3B-201ENST00000373888 PDIA6Q15084 440 aa18.72■□□□□ 0.59
SMPDL3B-201ENST00000373888 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.72■□□□□ 0.59
SMPDL3B-201ENST00000373888 CACNA1FO60840 1977 aa18.72■□□□□ 0.59
SMPDL3B-201ENST00000373888 CYP19A1P11511 503 aaPredicted RBP18.71■□□□□ 0.59
SMPDL3B-201ENST00000373888 ITPK1Q13572 414 aa18.71■□□□□ 0.59
SMPDL3B-201ENST00000373888 DDX21Q9NR30 783 aaKnown RBP eCLIP18.71■□□□□ 0.59
SMPDL3B-201ENST00000373888 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
SMPDL3B-201ENST00000373888 NOB1Q9ULX3 412 aaKnown RBP18.7■□□□□ 0.58
SMPDL3B-201ENST00000373888 PLSCR1O15162 318 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 PROSER3Q2NL68 480 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 ARHGAP45Q92619 1136 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 HYPKQ9NX55 129 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 CCNL1Q9UK58 526 aaPredicted RBP18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 RGPD3A6NKT7 1758 aaPredicted RBP18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 RGPD4Q7Z3J3 1758 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 PTPRCP08575 1304 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 IPO8O15397 1037 aaKnown RBP18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 PLIN1O60240 522 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 ZKSCAN2Q63HK3 967 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
SMPDL3B-201ENST00000373888 RREB1Q92766 1687 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 NBPF26B4DH59 902 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 APBA3O96018 575 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 A1BGP04217 495 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 FLIIQ13045 1269 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 SLC27A3Q5K4L6 730 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 NBPF14Q5TI25 921 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 NBPF10Q6P3W6 841 aaKnown RBP18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 G2E3Q7L622 706 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 NBPF15Q8N660 670 aa18.68■□□□□ 0.58
SMPDL3B-201ENST00000373888 ANXA1P04083 346 aa18.67■□□□□ 0.58
SMPDL3B-201ENST00000373888 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
SMPDL3B-201ENST00000373888 TRIM27P14373 513 aa18.66■□□□□ 0.58
SMPDL3B-201ENST00000373888 LINC00116Q8NCU8 138 aa18.66■□□□□ 0.58
SMPDL3B-201ENST00000373888 PHAXQ9H814 394 aaKnown RBP18.66■□□□□ 0.58
SMPDL3B-201ENST00000373888 CNTNAP4Q9C0A0 1308 aa18.66■□□□□ 0.58
SMPDL3B-201ENST00000373888 MYL6BP14649 208 aa18.65■□□□□ 0.58
SMPDL3B-201ENST00000373888 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
SMPDL3B-201ENST00000373888 PIP4K2AP48426 406 aaPredicted RBP18.65■□□□□ 0.58
SMPDL3B-201ENST00000373888 API5Q9BZZ5 524 aaKnown RBP18.65■□□□□ 0.58
SMPDL3B-201ENST00000373888 CCDC87Q9NVE4 849 aa18.65■□□□□ 0.58
SMPDL3B-201ENST00000373888 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
SMPDL3B-201ENST00000373888 KCNQ4P56696 695 aa18.64■□□□□ 0.58
SMPDL3B-201ENST00000373888 PDE3AQ14432 1141 aa18.64■□□□□ 0.58
SMPDL3B-201ENST00000373888 INTS5Q6P9B9 1019 aaKnown RBP18.64■□□□□ 0.58
SMPDL3B-201ENST00000373888 LRRC4BQ9NT99 713 aa18.64■□□□□ 0.58
SMPDL3B-201ENST00000373888 ZBTB1Q9Y2K1 713 aa18.64■□□□□ 0.58
SMPDL3B-201ENST00000373888 MS4A1P11836 297 aa18.64■□□□□ 0.57
SMPDL3B-201ENST00000373888 HMGB2P26583 209 aaKnown RBP18.64■□□□□ 0.57
SMPDL3B-201ENST00000373888 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
SMPDL3B-201ENST00000373888 RC3H1Q5TC82 1133 aaKnown RBP18.64■□□□□ 0.57
SMPDL3B-201ENST00000373888 PROM2Q8N271 834 aa18.64■□□□□ 0.57
SMPDL3B-201ENST00000373888 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
SMPDL3B-201ENST00000373888 FKBP5Q13451 457 aaPredicted RBP18.63■□□□□ 0.57
SMPDL3B-201ENST00000373888 C20orf194Q5TEA3 1177 aa18.63■□□□□ 0.57
SMPDL3B-201ENST00000373888 C4BP0C0L5 1744 aa18.63■□□□□ 0.57
SMPDL3B-201ENST00000373888 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
SMPDL3B-201ENST00000373888 COPS6Q7L5N1 327 aa18.62■□□□□ 0.57
SMPDL3B-201ENST00000373888 DZIP1LQ8IYY4 767 aaKnown RBP18.62■□□□□ 0.57
SMPDL3B-201ENST00000373888 XAGE3Q8WTP9 111 aa18.62■□□□□ 0.57
SMPDL3B-201ENST00000373888 TNNQ9UQP3 1299 aa18.62■□□□□ 0.57
SMPDL3B-201ENST00000373888 ABCC4O15439 1325 aa18.62■□□□□ 0.57
SMPDL3B-201ENST00000373888 SF3B2Q13435 895 aaKnown RBP18.61■□□□□ 0.57
SMPDL3B-201ENST00000373888 CCDC125Q86Z20 511 aa18.61■□□□□ 0.57
SMPDL3B-201ENST00000373888 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
SMPDL3B-201ENST00000373888 RLBP1P12271 317 aa18.6■□□□□ 0.57
SMPDL3B-201ENST00000373888 EIF5P55010 431 aaKnown RBP18.6■□□□□ 0.57
SMPDL3B-201ENST00000373888 FTSJ3Q8IY81 847 aaKnown RBP18.6■□□□□ 0.57
SMPDL3B-201ENST00000373888 CLUAP1Q96AJ1 413 aa18.6■□□□□ 0.57
SMPDL3B-201ENST00000373888 ADCY9O60503 1353 aa18.6■□□□□ 0.57
SMPDL3B-201ENST00000373888 PXDNLA1KZ92 1463 aa18.6■□□□□ 0.57
SMPDL3B-201ENST00000373888 AIMP1Q12904 312 aaKnown RBP18.59■□□□□ 0.57
SMPDL3B-201ENST00000373888 PANK1Q8TE04 598 aa18.59■□□□□ 0.57
SMPDL3B-201ENST00000373888 CAMKK2Q96RR4 588 aa18.59■□□□□ 0.57
SMPDL3B-201ENST00000373888 BAG6P46379 1132 aa18.59■□□□□ 0.57
SMPDL3B-201ENST00000373888 KSR2Q6VAB6 950 aa18.59■□□□□ 0.57
SMPDL3B-201ENST00000373888 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.56
SMPDL3B-201ENST00000373888 F6X3S4 739 aa18.58■□□□□ 0.56
SMPDL3B-201ENST00000373888 IRX6P78412 446 aaPredicted RBP18.58■□□□□ 0.56
SMPDL3B-201ENST00000373888 ANKRD13DQ6ZTN6 518 aa18.58■□□□□ 0.56
SMPDL3B-201ENST00000373888 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.56
SMPDL3B-201ENST00000373888 RPS6KA4O75676 772 aa18.57■□□□□ 0.56
SMPDL3B-201ENST00000373888 EN1Q05925 392 aaPredicted RBP18.57■□□□□ 0.56
SMPDL3B-201ENST00000373888 TTLL7Q6ZT98 887 aa18.57■□□□□ 0.56
SMPDL3B-201ENST00000373888 PLBD2Q8NHP8 589 aa18.57■□□□□ 0.56
SMPDL3B-201ENST00000373888 ZNF330Q9Y3S2 320 aaPredicted RBP18.57■□□□□ 0.56
SMPDL3B-201ENST00000373888 COL15A1P39059 1388 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms