RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 LAMC1P11047 1609 aa12.82□□□□□ -0.36
CSMD2-204ENST00000373380 IDH1O75874 414 aaKnown RBP12.82□□□□□ -0.36
CSMD2-204ENST00000373380 KLHL40Q2TBA0 621 aa12.82□□□□□ -0.36
CSMD2-204ENST00000373380 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
CSMD2-204ENST00000373380 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
CSMD2-204ENST00000373380 TRIM22Q8IYM9 498 aa12.82□□□□□ -0.36
CSMD2-204ENST00000373380 TSPYL6Q8N831 410 aa12.82□□□□□ -0.36
CSMD2-204ENST00000373380 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
CSMD2-204ENST00000373380 IL16Q14005 1332 aa12.82□□□□□ -0.36
CSMD2-204ENST00000373380 NSD2O96028 1365 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 FOXO3O43524 673 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 OFD1O75665 1012 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 FILIP1LQ4L180 1135 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
CSMD2-204ENST00000373380 TRIM34Q9BYJ4 488 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 PI4KAP2A4QPH2 592 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 PI4KAP1Q8N8J0 262 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 ARAP3Q8WWN8 1544 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 MYD88Q99836 296 aa12.81□□□□□ -0.36
CSMD2-204ENST00000373380 ZHX1Q9UKY1 873 aaPredicted RBP12.81□□□□□ -0.36
CSMD2-204ENST00000373380 PTPRCP08575 1304 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 SYNMO15061 1565 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 H0YHG0 523 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 SKIDA1Q1XH10 827 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 KRT24Q2M2I5 525 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 TMX3Q96JJ7 454 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 CAGE1Q8TC20 777 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 MPHOSPH8Q99549 860 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 SCAND2PQ9GZW5 306 aaPredicted RBP12.8□□□□□ -0.36
CSMD2-204ENST00000373380 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 CEBPAP49715 358 aaPredicted RBP12.8□□□□□ -0.36
CSMD2-204ENST00000373380 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
CSMD2-204ENST00000373380 RUFY1Q96T51 708 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
CSMD2-204ENST00000373380 ZFYVE16Q7Z3T8 1539 aa12.79□□□□□ -0.36
CSMD2-204ENST00000373380 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
CSMD2-204ENST00000373380 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
CSMD2-204ENST00000373380 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
CSMD2-204ENST00000373380 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
CSMD2-204ENST00000373380 CCDC69A6NI79 296 aa12.79□□□□□ -0.36
CSMD2-204ENST00000373380 STX6O43752 255 aa12.79□□□□□ -0.36
CSMD2-204ENST00000373380 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
CSMD2-204ENST00000373380 NACAP1Q9BZK3 213 aa12.79□□□□□ -0.36
CSMD2-204ENST00000373380 SH2B1Q9NRF2 756 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-204ENST00000373380 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-204ENST00000373380 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 HCLS1P14317 486 aaPredicted RBP12.78□□□□□ -0.36
CSMD2-204ENST00000373380 PDE1AP54750 535 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 PIBF1Q8WXW3 757 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 CCT2P78371 535 aaKnown RBP12.78□□□□□ -0.36
CSMD2-204ENST00000373380 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 CFAP100Q494V2 611 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 CCDC82Q8N4S0 544 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 ANKRD44Q8N8A2 993 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
CSMD2-204ENST00000373380 POLKQ9UBT6 870 aa12.78□□□□□ -0.36
CSMD2-204ENST00000373380 MYOM2P54296 1465 aa12.77□□□□□ -0.36
CSMD2-204ENST00000373380 GJB2P29033 226 aa12.77□□□□□ -0.36
CSMD2-204ENST00000373380 PPFIBP1Q86W92 1011 aa12.77□□□□□ -0.36
CSMD2-204ENST00000373380 PDCL2Q8N4E4 241 aa12.77□□□□□ -0.36
CSMD2-204ENST00000373380 MRPL50Q8N5N7 158 aaKnown RBP12.77□□□□□ -0.36
CSMD2-204ENST00000373380 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.36
CSMD2-204ENST00000373380 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.36
CSMD2-204ENST00000373380 ACEP12821 1306 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 ERICH4A6NGS2 130 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 VAMP4O75379 141 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 TDO2P48775 406 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 KDM5AP29375 1690 aaKnown RBP12.77□□□□□ -0.37
CSMD2-204ENST00000373380 ANKRD36BQ8N2N9 1353 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 TXLNAP40222 546 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 SMC5Q8IY18 1101 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 KCNH5Q8NCM2 988 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 SMARCE1Q969G3 411 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 TCEAL9Q9UHQ7 104 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 SHROOM2Q13796 1616 aa12.77□□□□□ -0.37
CSMD2-204ENST00000373380 CCP110O43303 1012 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 CBX1P83916 185 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 IMMTQ16891 758 aaKnown RBP12.76□□□□□ -0.37
CSMD2-204ENST00000373380 PDCL3Q9H2J4 239 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 TET3O43151 1660 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 ADCY5O95622 1261 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 IFIT1P09914 478 aaKnown RBP12.76□□□□□ -0.37
CSMD2-204ENST00000373380 NECAB1Q8N987 351 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 RHPN1Q8TCX5 695 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 A0A087WZG4 1122 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 GIMAP6Q6P9H5 292 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 ABCF2Q9UG63 623 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
CSMD2-204ENST00000373380 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
CSMD2-204ENST00000373380 C16orf45Q96MC5 204 aaPredicted RBP12.75□□□□□ -0.37
CSMD2-204ENST00000373380 ZNF830Q96NB3 372 aaPredicted RBP12.75□□□□□ -0.37
CSMD2-204ENST00000373380 ERVK-7P63135 1459 aa12.75□□□□□ -0.37
CSMD2-204ENST00000373380 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms