RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 RNF123Q5XPI4 1314 aa20.3■□□□□ 0.84
TMEM53-204ENST00000372243 APBA3O96018 575 aa20.29■□□□□ 0.84
TMEM53-204ENST00000372243 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
TMEM53-204ENST00000372243 CYP19A1P11511 503 aaPredicted RBP20.29■□□□□ 0.84
TMEM53-204ENST00000372243 HMGB2P26583 209 aaKnown RBP20.29■□□□□ 0.84
TMEM53-204ENST00000372243 SLC27A3Q5K4L6 730 aa20.29■□□□□ 0.84
TMEM53-204ENST00000372243 BCL2L13Q9BXK5 485 aa20.29■□□□□ 0.84
TMEM53-204ENST00000372243 KIF16BQ96L93 1317 aa20.29■□□□□ 0.84
TMEM53-204ENST00000372243 ITPK1Q13572 414 aa20.29■□□□□ 0.84
TMEM53-204ENST00000372243 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
TMEM53-204ENST00000372243 DDX21Q9NR30 783 aaKnown RBP eCLIP20.29■□□□□ 0.84
TMEM53-204ENST00000372243 CCNL1Q9UK58 526 aaPredicted RBP20.29■□□□□ 0.84
TMEM53-204ENST00000372243 PDIA6Q15084 440 aa20.28■□□□□ 0.84
TMEM53-204ENST00000372243 CHPF2Q9P2E5 772 aa20.28■□□□□ 0.84
TMEM53-204ENST00000372243 SUPT16HQ9Y5B9 1047 aaKnown RBP20.28■□□□□ 0.84
TMEM53-204ENST00000372243 RREB1Q92766 1687 aa20.27■□□□□ 0.84
TMEM53-204ENST00000372243 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
TMEM53-204ENST00000372243 CCDC125Q86Z20 511 aa20.27■□□□□ 0.84
TMEM53-204ENST00000372243 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.27■□□□□ 0.84
TMEM53-204ENST00000372243 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
TMEM53-204ENST00000372243 TAF1LQ8IZX4 1826 aa20.27■□□□□ 0.84
TMEM53-204ENST00000372243 RRP1P56182 461 aaKnown RBP20.25■□□□□ 0.83
TMEM53-204ENST00000372243 ARHGAP45Q92619 1136 aa20.25■□□□□ 0.83
TMEM53-204ENST00000372243 IPO8O15397 1037 aaKnown RBP20.25■□□□□ 0.83
TMEM53-204ENST00000372243 TXNRD1Q16881 649 aa20.25■□□□□ 0.83
TMEM53-204ENST00000372243 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
TMEM53-204ENST00000372243 PTPRCP08575 1304 aa20.25■□□□□ 0.83
TMEM53-204ENST00000372243 NBPF26B4DH59 902 aa20.24■□□□□ 0.83
TMEM53-204ENST00000372243 A1BGP04217 495 aa20.24■□□□□ 0.83
TMEM53-204ENST00000372243 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
TMEM53-204ENST00000372243 RC3H1Q5TC82 1133 aaKnown RBP20.24■□□□□ 0.83
TMEM53-204ENST00000372243 NBPF14Q5TI25 921 aa20.24■□□□□ 0.83
TMEM53-204ENST00000372243 NBPF10Q6P3W6 841 aaKnown RBP20.24■□□□□ 0.83
TMEM53-204ENST00000372243 NBPF15Q8N660 670 aa20.24■□□□□ 0.83
TMEM53-204ENST00000372243 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
TMEM53-204ENST00000372243 NOB1Q9ULX3 412 aaKnown RBP20.24■□□□□ 0.83
TMEM53-204ENST00000372243 CNTNAP4Q9C0A0 1308 aa20.24■□□□□ 0.83
TMEM53-204ENST00000372243 CRKLP46109 303 aaKnown RBP20.23■□□□□ 0.83
TMEM53-204ENST00000372243 FLIIQ13045 1269 aa20.23■□□□□ 0.83
TMEM53-204ENST00000372243 PROSER3Q2NL68 480 aa20.23■□□□□ 0.83
TMEM53-204ENST00000372243 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
TMEM53-204ENST00000372243 PROM2Q8N271 834 aa20.23■□□□□ 0.83
TMEM53-204ENST00000372243 LINC00116Q8NCU8 138 aa20.23■□□□□ 0.83
TMEM53-204ENST00000372243 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
TMEM53-204ENST00000372243 INTS5Q6P9B9 1019 aaKnown RBP20.22■□□□□ 0.83
TMEM53-204ENST00000372243 G2E3Q7L622 706 aa20.22■□□□□ 0.83
TMEM53-204ENST00000372243 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
TMEM53-204ENST00000372243 MYH14Q7Z406 1995 aaKnown RBP20.22■□□□□ 0.83
TMEM53-204ENST00000372243 MYL6BP14649 208 aa20.21■□□□□ 0.83
TMEM53-204ENST00000372243 IL6STP40189 918 aaPredicted RBP20.21■□□□□ 0.83
TMEM53-204ENST00000372243 PHAXQ9H814 394 aaKnown RBP20.21■□□□□ 0.83
TMEM53-204ENST00000372243 C4BP0C0L5 1744 aa20.21■□□□□ 0.83
TMEM53-204ENST00000372243 ANXA1P04083 346 aa20.21■□□□□ 0.83
TMEM53-204ENST00000372243 CANXP27824 592 aaKnown RBP20.21■□□□□ 0.83
TMEM53-204ENST00000372243 BAG6P46379 1132 aa20.21■□□□□ 0.83
TMEM53-204ENST00000372243 KCNQ4P56696 695 aa20.21■□□□□ 0.83
TMEM53-204ENST00000372243 ATF7IPQ6VMQ6 1270 aa20.21■□□□□ 0.83
TMEM53-204ENST00000372243 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
TMEM53-204ENST00000372243 MS4A1P11836 297 aa20.2■□□□□ 0.82
TMEM53-204ENST00000372243 CAMKK2Q96RR4 588 aa20.2■□□□□ 0.82
TMEM53-204ENST00000372243 API5Q9BZZ5 524 aaKnown RBP20.2■□□□□ 0.82
TMEM53-204ENST00000372243 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
TMEM53-204ENST00000372243 PLIN1O60240 522 aa20.18■□□□□ 0.82
TMEM53-204ENST00000372243 TRIM27P14373 513 aa20.18■□□□□ 0.82
TMEM53-204ENST00000372243 EIF5P55010 431 aaKnown RBP20.18■□□□□ 0.82
TMEM53-204ENST00000372243 FKBP5Q13451 457 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-204ENST00000372243 PDE3AQ14432 1141 aa20.18■□□□□ 0.82
TMEM53-204ENST00000372243 DDX58O95786 925 aaKnown RBP20.17■□□□□ 0.82
TMEM53-204ENST00000372243 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
TMEM53-204ENST00000372243 RPS6KA4O75676 772 aa20.17■□□□□ 0.82
TMEM53-204ENST00000372243 EN1Q05925 392 aaPredicted RBP20.17■□□□□ 0.82
TMEM53-204ENST00000372243 XAGE3Q8WTP9 111 aa20.17■□□□□ 0.82
TMEM53-204ENST00000372243 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
TMEM53-204ENST00000372243 KSR2Q6VAB6 950 aa20.15■□□□□ 0.82
TMEM53-204ENST00000372243 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
TMEM53-204ENST00000372243 DZIP1LQ8IYY4 767 aaKnown RBP20.15■□□□□ 0.82
TMEM53-204ENST00000372243 ABCC4O15439 1325 aa20.14■□□□□ 0.82
TMEM53-204ENST00000372243 AIMP1Q12904 312 aaKnown RBP20.14■□□□□ 0.81
TMEM53-204ENST00000372243 ANKRD13DQ6ZTN6 518 aa20.14■□□□□ 0.81
TMEM53-204ENST00000372243 AK7Q96M32 723 aa20.14■□□□□ 0.81
TMEM53-204ENST00000372243 PXDNLA1KZ92 1463 aa20.14■□□□□ 0.81
TMEM53-204ENST00000372243 A0A087WZG4 1122 aa20.13■□□□□ 0.81
TMEM53-204ENST00000372243 PI4KAP2A4QPH2 592 aa20.13■□□□□ 0.81
TMEM53-204ENST00000372243 PI4KAP1Q8N8J0 262 aa20.13■□□□□ 0.81
TMEM53-204ENST00000372243 PLBD2Q8NHP8 589 aa20.13■□□□□ 0.81
TMEM53-204ENST00000372243 UPF1Q92900 1129 aaKnown RBP eCLIP20.13■□□□□ 0.81
TMEM53-204ENST00000372243 RTCBQ9Y3I0 505 aaKnown RBP20.13■□□□□ 0.81
TMEM53-204ENST00000372243 ADCY9O60503 1353 aa20.13■□□□□ 0.81
TMEM53-204ENST00000372243 COL15A1P39059 1388 aa20.13■□□□□ 0.81
TMEM53-204ENST00000372243 UBR3Q6ZT12 1888 aa20.13■□□□□ 0.81
TMEM53-204ENST00000372243 GNPATO15228 680 aa20.12■□□□□ 0.81
TMEM53-204ENST00000372243 DEFB132Q7Z7B7 95 aa20.12■□□□□ 0.81
TMEM53-204ENST00000372243 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
TMEM53-204ENST00000372243 KIF6Q6ZMV9 814 aa20.12■□□□□ 0.81
TMEM53-204ENST00000372243 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
TMEM53-204ENST00000372243 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
TMEM53-204ENST00000372243 TNNQ9UQP3 1299 aa20.12■□□□□ 0.81
TMEM53-204ENST00000372243 ZNF330Q9Y3S2 320 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-204ENST00000372243 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
TMEM53-204ENST00000372243 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms