RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 STARD3NLO95772 234 aa21.15■□□□□ 0.98
TMEM53-203ENST00000372242 EXOSC9Q06265 439 aaKnown RBP21.15■□□□□ 0.98
TMEM53-203ENST00000372242 SMIM5Q71RC9 77 aa21.15■□□□□ 0.98
TMEM53-203ENST00000372242 NECTIN2Q92692 538 aa21.15■□□□□ 0.98
TMEM53-203ENST00000372242 AKT1S1Q96B36 256 aa21.15■□□□□ 0.98
TMEM53-203ENST00000372242 MYH14Q7Z406 1995 aaKnown RBP21.14■□□□□ 0.98
TMEM53-203ENST00000372242 EIF2S2P20042 333 aaKnown RBP21.14■□□□□ 0.97
TMEM53-203ENST00000372242 A1BGP04217 495 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 PIP4K2AP48426 406 aaPredicted RBP21.13■□□□□ 0.97
TMEM53-203ENST00000372242 INTS5Q6P9B9 1019 aaKnown RBP21.13■□□□□ 0.97
TMEM53-203ENST00000372242 TRMT2AQ8IZ69 625 aaKnown RBP21.13■□□□□ 0.97
TMEM53-203ENST00000372242 AK7Q96M32 723 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 LAMB4A4D0S4 1761 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 GNPATO15228 680 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 SLC15A2Q16348 729 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 NBPF14Q5TI25 921 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 CCDC87Q9NVE4 849 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 STK32BQ9NY57 414 aa21.13■□□□□ 0.97
TMEM53-203ENST00000372242 CNTNAP4Q9C0A0 1308 aa21.12■□□□□ 0.97
TMEM53-203ENST00000372242 TFCP2L1Q9NZI6 479 aa21.12■□□□□ 0.97
TMEM53-203ENST00000372242 ZBTB1Q9Y2K1 713 aa21.12■□□□□ 0.97
TMEM53-203ENST00000372242 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
TMEM53-203ENST00000372242 TWISTNBQ3B726 338 aaPredicted RBP21.11■□□□□ 0.97
TMEM53-203ENST00000372242 RC3H1Q5TC82 1133 aaKnown RBP21.11■□□□□ 0.97
TMEM53-203ENST00000372242 HMGB2P26583 209 aaKnown RBP21.1■□□□□ 0.97
TMEM53-203ENST00000372242 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
TMEM53-203ENST00000372242 PHF14O94880 888 aa21.09■□□□□ 0.97
TMEM53-203ENST00000372242 HOXB7P09629 217 aa21.09■□□□□ 0.97
TMEM53-203ENST00000372242 R3HDM1Q15032 1099 aaKnown RBP21.09■□□□□ 0.97
TMEM53-203ENST00000372242 TUBGCP6Q96RT7 1819 aa21.09■□□□□ 0.97
TMEM53-203ENST00000372242 NBPF26B4DH59 902 aa21.08■□□□□ 0.97
TMEM53-203ENST00000372242 NBPF10Q6P3W6 841 aaKnown RBP21.08■□□□□ 0.97
TMEM53-203ENST00000372242 NBPF15Q8N660 670 aa21.08■□□□□ 0.97
TMEM53-203ENST00000372242 UBR3Q6ZT12 1888 aa21.08■□□□□ 0.97
TMEM53-203ENST00000372242 PSDA5PKW4 1024 aaPredicted RBP21.08■□□□□ 0.96
TMEM53-203ENST00000372242 RTCBQ9Y3I0 505 aaKnown RBP21.08■□□□□ 0.96
TMEM53-203ENST00000372242 ZNF330Q9Y3S2 320 aaPredicted RBP21.08■□□□□ 0.96
TMEM53-203ENST00000372242 TCERG1O14776 1098 aaKnown RBP21.07■□□□□ 0.96
TMEM53-203ENST00000372242 VAMP4O75379 141 aa21.07■□□□□ 0.96
TMEM53-203ENST00000372242 RPS6KA4O75676 772 aa21.07■□□□□ 0.96
TMEM53-203ENST00000372242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.06■□□□□ 0.96
TMEM53-203ENST00000372242 ANXA1P04083 346 aa21.06■□□□□ 0.96
TMEM53-203ENST00000372242 MYL6BP14649 208 aa21.06■□□□□ 0.96
TMEM53-203ENST00000372242 PROSER3Q2NL68 480 aa21.06■□□□□ 0.96
TMEM53-203ENST00000372242 PDGFDQ9GZP0 370 aaPredicted RBP21.06■□□□□ 0.96
TMEM53-203ENST00000372242 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
TMEM53-203ENST00000372242 PNPLA7Q6ZV29 1317 aa21.06■□□□□ 0.96
TMEM53-203ENST00000372242 PDIA6Q15084 440 aa21.05■□□□□ 0.96
TMEM53-203ENST00000372242 SOS1Q07889 1333 aaPredicted RBP21.05■□□□□ 0.96
TMEM53-203ENST00000372242 MSH5O43196 834 aa21.04■□□□□ 0.96
TMEM53-203ENST00000372242 SSFA2P28290 1259 aa21.04■□□□□ 0.96
TMEM53-203ENST00000372242 EIF5P55010 431 aaKnown RBP21.04■□□□□ 0.96
TMEM53-203ENST00000372242 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
TMEM53-203ENST00000372242 IL6STP40189 918 aaPredicted RBP21.03■□□□□ 0.96
TMEM53-203ENST00000372242 TRAPPC3LQ5T215 181 aa21.03■□□□□ 0.96
TMEM53-203ENST00000372242 CCDC30Q5VVM6 783 aa21.03■□□□□ 0.96
TMEM53-203ENST00000372242 ARHGEF1Q92888 912 aaKnown RBP21.03■□□□□ 0.96
TMEM53-203ENST00000372242 COL15A1P39059 1388 aa21.02■□□□□ 0.96
TMEM53-203ENST00000372242 ERBB4Q15303 1308 aa21.02■□□□□ 0.95
TMEM53-203ENST00000372242 ARXQ96QS3 562 aa21.01■□□□□ 0.95
TMEM53-203ENST00000372242 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.95
TMEM53-203ENST00000372242 DBF4Q9UBU7 674 aaPredicted RBP21.01■□□□□ 0.95
TMEM53-203ENST00000372242 QSER1Q2KHR3 1735 aa21.01■□□□□ 0.95
TMEM53-203ENST00000372242 LRP10Q7Z4F1 713 aa21■□□□□ 0.95
TMEM53-203ENST00000372242 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
TMEM53-203ENST00000372242 TBC1D2BQ9UPU7 963 aa21■□□□□ 0.95
TMEM53-203ENST00000372242 ADRA2BP18089 450 aa20.99■□□□□ 0.95
TMEM53-203ENST00000372242 RFC4P35249 363 aa20.99■□□□□ 0.95
TMEM53-203ENST00000372242 FLAD1Q8NFF5 587 aa20.99■□□□□ 0.95
TMEM53-203ENST00000372242 C4AP0C0L4 1744 aa20.99■□□□□ 0.95
TMEM53-203ENST00000372242 STK31Q9BXU1 1019 aa20.99■□□□□ 0.95
TMEM53-203ENST00000372242 SRP68Q9UHB9 627 aaKnown RBP20.99■□□□□ 0.95
TMEM53-203ENST00000372242 SLC4A2P04920 1241 aa20.98■□□□□ 0.95
TMEM53-203ENST00000372242 AIMP1Q12904 312 aaKnown RBP20.98■□□□□ 0.95
TMEM53-203ENST00000372242 CHMP4AQ9BY43 222 aa20.98■□□□□ 0.95
TMEM53-203ENST00000372242 TTLL7Q6ZT98 887 aa20.97■□□□□ 0.95
TMEM53-203ENST00000372242 DZIP3Q86Y13 1208 aaKnown RBP20.97■□□□□ 0.95
TMEM53-203ENST00000372242 PHAXQ9H814 394 aaKnown RBP20.97■□□□□ 0.95
TMEM53-203ENST00000372242 COPS6Q7L5N1 327 aa20.97■□□□□ 0.95
TMEM53-203ENST00000372242 XAGE3Q8WTP9 111 aa20.97■□□□□ 0.95
TMEM53-203ENST00000372242 BCL2L13Q9BXK5 485 aa20.97■□□□□ 0.95
TMEM53-203ENST00000372242 HYPKQ9NX55 129 aa20.97■□□□□ 0.95
TMEM53-203ENST00000372242 CASZ1Q86V15 1759 aa20.96■□□□□ 0.95
TMEM53-203ENST00000372242 USP42Q9H9J4 1324 aaKnown RBP20.95■□□□□ 0.95
TMEM53-203ENST00000372242 A0A087WZG4 1122 aa20.95■□□□□ 0.94
TMEM53-203ENST00000372242 ZPR1O75312 459 aa20.95■□□□□ 0.94
TMEM53-203ENST00000372242 CT47B1P0C2W7 299 aaPredicted RBP20.95■□□□□ 0.94
TMEM53-203ENST00000372242 USPL1Q5W0Q7 1092 aa20.95■□□□□ 0.94
TMEM53-203ENST00000372242 G2E3Q7L622 706 aa20.95■□□□□ 0.94
TMEM53-203ENST00000372242 SSH1Q8WYL5 1049 aa20.95■□□□□ 0.94
TMEM53-203ENST00000372242 NARFQ9UHQ1 456 aa20.94■□□□□ 0.94
TMEM53-203ENST00000372242 ZBTB7AO95365 584 aa20.94■□□□□ 0.94
TMEM53-203ENST00000372242 CAMTA2O94983 1202 aa20.93■□□□□ 0.94
TMEM53-203ENST00000372242 MSL1Q68DK7 614 aa20.93■□□□□ 0.94
TMEM53-203ENST00000372242 ZBTB3Q9H5J0 574 aa20.93■□□□□ 0.94
TMEM53-203ENST00000372242 GYS1P13807 737 aa20.92■□□□□ 0.94
TMEM53-203ENST00000372242 RARSP54136 660 aaKnown RBP20.92■□□□□ 0.94
TMEM53-203ENST00000372242 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
TMEM53-203ENST00000372242 KIF6Q6ZMV9 814 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms