RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MST1RQ04912 1400 aa35.44■■■■□ 3.26
SSBP3-204ENST00000371320 L1TD1Q5T7N2 865 aaKnown RBP35.44■■■■□ 3.26
SSBP3-204ENST00000371320 ERBB3P21860 1342 aa35.43■■■■□ 3.26
SSBP3-204ENST00000371320 HEG1Q9ULI3 1381 aa35.42■■■■□ 3.26
SSBP3-204ENST00000371320 ATF3P18847 181 aa35.41■■■■□ 3.26
SSBP3-204ENST00000371320 CHMLP26374 656 aa35.41■■■■□ 3.26
SSBP3-204ENST00000371320 RHPN1Q8TCX5 695 aa35.4■■■■□ 3.26
SSBP3-204ENST00000371320 TUBGCP6Q96RT7 1819 aa35.4■■■■□ 3.26
SSBP3-204ENST00000371320 NUTM1Q86Y26 1132 aa35.39■■■■□ 3.26
SSBP3-204ENST00000371320 KIF1BPQ96EK5 621 aa35.39■■■■□ 3.26
SSBP3-204ENST00000371320 MAP3K2Q9Y2U5 619 aa35.38■■■■□ 3.25
SSBP3-204ENST00000371320 PROSER3Q2NL68 480 aa35.37■■■■□ 3.25
SSBP3-204ENST00000371320 PTMSP20962 102 aa35.37■■■■□ 3.25
SSBP3-204ENST00000371320 SSFA2P28290 1259 aa35.37■■■■□ 3.25
SSBP3-204ENST00000371320 KSR2Q6VAB6 950 aa35.37■■■■□ 3.25
SSBP3-204ENST00000371320 RAPGEF4Q8WZA2 1011 aa35.37■■■■□ 3.25
SSBP3-204ENST00000371320 LMTK3Q96Q04 1460 aa35.36■■■■□ 3.25
SSBP3-204ENST00000371320 PRAMEF22A3QJZ6 481 aa35.36■■■■□ 3.25
SSBP3-204ENST00000371320 GOLGA6L3A6NEY3 463 aa35.36■■■■□ 3.25
SSBP3-204ENST00000371320 ALDH1L1O75891 902 aa35.36■■■■□ 3.25
SSBP3-204ENST00000371320 UNC5CLQ8IV45 518 aa35.36■■■■□ 3.25
SSBP3-204ENST00000371320 ALS2Q96Q42 1657 aa35.36■■■■□ 3.25
SSBP3-204ENST00000371320 MCCP23508 829 aa35.35■■■■□ 3.25
SSBP3-204ENST00000371320 HSP90AB4PQ58FF6 505 aa35.35■■■■□ 3.25
SSBP3-204ENST00000371320 NLRP2Q9NX02 1062 aa35.35■■■■□ 3.25
SSBP3-204ENST00000371320 HYPKQ9NX55 129 aa35.35■■■■□ 3.25
SSBP3-204ENST00000371320 RGPD5Q99666 1765 aa35.34■■■■□ 3.25
SSBP3-204ENST00000371320 TMEM94Q12767 1356 aa35.33■■■■□ 3.25
SSBP3-204ENST00000371320 ANO2Q9NQ90 1003 aa35.33■■■■□ 3.25
SSBP3-204ENST00000371320 C9orf78Q9NZ63 289 aaPredicted RBP35.33■■■■□ 3.25
SSBP3-204ENST00000371320 FSD2A1L4K1 749 aa35.32■■■■□ 3.24
SSBP3-204ENST00000371320 DDX17Q92841 729 aaKnown RBP35.32■■■■□ 3.24
SSBP3-204ENST00000371320 CWC22Q9HCG8 908 aaKnown RBP35.32■■■■□ 3.24
SSBP3-204ENST00000371320 SKOR2Q2VWA4 1001 aaPredicted RBP35.31■■■■□ 3.24
SSBP3-204ENST00000371320 CLEC17AQ6ZS10 378 aa35.31■■■■□ 3.24
SSBP3-204ENST00000371320 NUCB2P80303 420 aa35.31■■■■□ 3.24
SSBP3-204ENST00000371320 MTX1Q13505 466 aa35.31■■■■□ 3.24
SSBP3-204ENST00000371320 SIPA1L3O60292 1781 aaPredicted RBP35.31■■■■□ 3.24
SSBP3-204ENST00000371320 HDAC5Q9UQL6 1122 aa35.3■■■■□ 3.24
SSBP3-204ENST00000371320 TATP17735 454 aaPredicted RBP35.29■■■■□ 3.24
SSBP3-204ENST00000371320 PI4K2BQ8TCG2 481 aa35.29■■■■□ 3.24
SSBP3-204ENST00000371320 ADAMTS7Q9UKP4 1686 aa35.29■■■■□ 3.24
SSBP3-204ENST00000371320 DDX21Q9NR30 783 aaKnown RBP eCLIP35.29■■■■□ 3.24
SSBP3-204ENST00000371320 NEK4P51957 841 aa35.28■■■■□ 3.24
SSBP3-204ENST00000371320 GOLGA6L22H0YM25 854 aa35.28■■■■□ 3.24
SSBP3-204ENST00000371320 DDX58O95786 925 aaKnown RBP35.28■■■■□ 3.24
SSBP3-204ENST00000371320 ANAPC15P60006 121 aa35.28■■■■□ 3.24
SSBP3-204ENST00000371320 OS9Q13438 667 aaPredicted RBP35.28■■■■□ 3.24
SSBP3-204ENST00000371320 RTN4Q9NQC3 1192 aaKnown RBP35.28■■■■□ 3.24
SSBP3-204ENST00000371320 SPG7Q9UQ90 795 aa35.28■■■■□ 3.24
SSBP3-204ENST00000371320 NPHP3Q7Z494 1330 aa35.27■■■■□ 3.24
SSBP3-204ENST00000371320 CWF19L2Q2TBE0 894 aaKnown RBP35.26■■■■□ 3.24
SSBP3-204ENST00000371320 ZNF790Q6PG37 636 aa35.26■■■■□ 3.24
SSBP3-204ENST00000371320 ARXQ96QS3 562 aa35.26■■■■□ 3.24
SSBP3-204ENST00000371320 SLC52A2Q9HAB3 445 aa35.26■■■■□ 3.24
SSBP3-204ENST00000371320 DCCP43146 1447 aa35.26■■■■□ 3.24
SSBP3-204ENST00000371320 BAG4O95429 457 aaKnown RBP35.25■■■■□ 3.23
SSBP3-204ENST00000371320 MAP4K4O95819 1239 aaPredicted RBP35.25■■■■□ 3.23
SSBP3-204ENST00000371320 CSB-PGBD3P0DP91 1061 aa35.25■■■■□ 3.23
SSBP3-204ENST00000371320 PHKG2P15735 406 aa35.25■■■■□ 3.23
SSBP3-204ENST00000371320 LINS1Q8NG48 757 aa35.25■■■■□ 3.23
SSBP3-204ENST00000371320 PALD1Q9ULE6 856 aa35.25■■■■□ 3.23
SSBP3-204ENST00000371320 SLC39A6Q13433 755 aa35.24■■■■□ 3.23
SSBP3-204ENST00000371320 MCM2P49736 904 aa35.23■■■■□ 3.23
SSBP3-204ENST00000371320 AIMP1Q12904 312 aaKnown RBP35.23■■■■□ 3.23
SSBP3-204ENST00000371320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.23■■■■□ 3.236e-7■■□□□ 12.6
SSBP3-204ENST00000371320 KDM6AO15550 1401 aaPredicted RBP35.23■■■■□ 3.23
SSBP3-204ENST00000371320 KDM4FA0A1W2PPD8 638 aa35.23■■■■□ 3.23
SSBP3-204ENST00000371320 PDIA6Q15084 440 aa35.23■■■■□ 3.23
SSBP3-204ENST00000371320 ZGPATQ8N5A5 531 aaKnown RBP35.23■■■■□ 3.23
SSBP3-204ENST00000371320 EPB41L2O43491 1005 aaKnown RBP35.22■■■■□ 3.23
SSBP3-204ENST00000371320 CYP2E1P05181 493 aaPredicted RBP35.22■■■■□ 3.23
SSBP3-204ENST00000371320 HSPA2P54652 639 aa35.22■■■■□ 3.23
SSBP3-204ENST00000371320 XRCC6P12956 609 aaKnown RBP eCLIP35.21■■■■□ 3.231e-7■□□□□ 8.9
SSBP3-204ENST00000371320 CNTROBQ8N137 903 aa35.21■■■■□ 3.23
SSBP3-204ENST00000371320 CABLES1Q8TDN4 633 aa35.21■■■■□ 3.23
SSBP3-204ENST00000371320 CADPS2Q86UW7 1296 aa35.21■■■■□ 3.23
SSBP3-204ENST00000371320 NFATC2IPQ8NCF5 419 aa35.21■■■■□ 3.23
SSBP3-204ENST00000371320 IFNL2Q8IZJ0 200 aa35.2■■■■□ 3.23
SSBP3-204ENST00000371320 USP42Q9H9J4 1324 aaKnown RBP35.2■■■■□ 3.23
SSBP3-204ENST00000371320 GRM8O00222 908 aa35.2■■■■□ 3.22
SSBP3-204ENST00000371320 CLASRPQ8N2M8 674 aaKnown RBP35.2■■■■□ 3.22
SSBP3-204ENST00000371320 MEGF6O75095 1541 aa35.19■■■■□ 3.22
SSBP3-204ENST00000371320 TTC41PQ6P2S7 1318 aa35.19■■■■□ 3.22
SSBP3-204ENST00000371320 ERC1Q8IUD2 1116 aa35.18■■■■□ 3.22
SSBP3-204ENST00000371320 IL17RAQ96F46 866 aa35.18■■■■□ 3.22
SSBP3-204ENST00000371320 TMX3Q96JJ7 454 aa35.18■■■■□ 3.22
SSBP3-204ENST00000371320 IL25Q9H293 177 aa35.18■■■■□ 3.22
SSBP3-204ENST00000371320 TNS3Q68CZ2 1445 aa35.17■■■■□ 3.22
SSBP3-204ENST00000371320 UTYO14607 1347 aa35.17■■■■□ 3.22
SSBP3-204ENST00000371320 PKP1Q13835 747 aa35.17■■■■□ 3.22
SSBP3-204ENST00000371320 CHRNA2Q15822 529 aa35.17■■■■□ 3.22
SSBP3-204ENST00000371320 RIC3Q7Z5B4 369 aa35.17■■■■□ 3.22
SSBP3-204ENST00000371320 ISY1Q9ULR0 285 aaKnown RBP35.17■■■■□ 3.22
SSBP3-204ENST00000371320 GLRX3O76003 335 aaKnown RBP35.16■■■■□ 3.22
SSBP3-204ENST00000371320 PA2G4Q9UQ80 394 aaKnown RBP35.16■■■■□ 3.22
SSBP3-204ENST00000371320 STRCP1A6NGW2 1772 aa35.16■■■■□ 3.22
SSBP3-204ENST00000371320 COL18A1P39060 1754 aa35.16■■■■□ 3.22
SSBP3-204ENST00000371320 SCN11AQ9UI33 1791 aa35.16■■■■□ 3.22
SSBP3-204ENST00000371320 MRE11P49959 708 aa35.15■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms