RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 TSC1Q92574 1164 aa11.06□□□□□ -0.64
SFR1-201ENST00000369727 FAM135BQ49AJ0 1406 aa11.06□□□□□ -0.64
SFR1-201ENST00000369727 LILRB3O75022 631 aa11.05□□□□□ -0.64
SFR1-201ENST00000369727 ZNF775Q96BV0 537 aaPredicted RBP11.05□□□□□ -0.64
SFR1-201ENST00000369727 DISP3Q9P2K9 1392 aa11.04□□□□□ -0.64
SFR1-201ENST00000369727 PPLO60437 1756 aa11.04□□□□□ -0.64
SFR1-201ENST00000369727 CLK2P49760 499 aaKnown RBP11.04□□□□□ -0.64
SFR1-201ENST00000369727 ZNF511Q8NB15 262 aa11.04□□□□□ -0.64
SFR1-201ENST00000369727 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
SFR1-201ENST00000369727 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
SFR1-201ENST00000369727 MAP10Q9P2G4 905 aa11.04□□□□□ -0.64
SFR1-201ENST00000369727 AMOTL2Q9Y2J4 779 aa11.04□□□□□ -0.64
SFR1-201ENST00000369727 CCDC144AA2RUR9 1427 aa11.04□□□□□ -0.64
SFR1-201ENST00000369727 PTPRUQ92729 1446 aa11.04□□□□□ -0.64
SFR1-201ENST00000369727 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
SFR1-201ENST00000369727 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
SFR1-201ENST00000369727 PER1O15534 1290 aaPredicted RBP11.03□□□□□ -0.64
SFR1-201ENST00000369727 RSPH6AQ9H0K4 717 aa11.03□□□□□ -0.64
SFR1-201ENST00000369727 GMPR2Q9P2T1 348 aaKnown RBP11.03□□□□□ -0.64
SFR1-201ENST00000369727 METP08581 1390 aa11.03□□□□□ -0.64
SFR1-201ENST00000369727 F12P00748 615 aaPredicted RBP11.02□□□□□ -0.64
SFR1-201ENST00000369727 RTL5Q5HYW3 569 aaPredicted RBP11.02□□□□□ -0.64
SFR1-201ENST00000369727 SPATA31E1Q6ZUB1 1445 aa11.02□□□□□ -0.65
SFR1-201ENST00000369727 KDM4CQ9H3R0 1056 aa11.01□□□□□ -0.65
SFR1-201ENST00000369727 C19orf44Q9H6X5 657 aa11.01□□□□□ -0.65
SFR1-201ENST00000369727 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
SFR1-201ENST00000369727 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
SFR1-201ENST00000369727 SLAIN2Q9P270 581 aa11.01□□□□□ -0.65
SFR1-201ENST00000369727 SETD1AO15047 1707 aaKnown RBP11□□□□□ -0.65
SFR1-201ENST00000369727 SIPA1L2Q9P2F8 1722 aaPredicted RBP11□□□□□ -0.65
SFR1-201ENST00000369727 WASF2Q9Y6W5 498 aa11□□□□□ -0.65
SFR1-201ENST00000369727 ANKRD30BQ9BXX2 1392 aa10.99□□□□□ -0.65
SFR1-201ENST00000369727 DCCP43146 1447 aa10.99□□□□□ -0.65
SFR1-201ENST00000369727 IFT172Q9UG01 1749 aa10.99□□□□□ -0.65
SFR1-201ENST00000369727 MED1Q15648 1581 aaPredicted RBP10.99□□□□□ -0.65
SFR1-201ENST00000369727 ATF3P18847 181 aa10.99□□□□□ -0.65
SFR1-201ENST00000369727 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
SFR1-201ENST00000369727 TLL2Q9Y6L7 1015 aa10.99□□□□□ -0.65
SFR1-201ENST00000369727 PRAG1Q86YV5 1406 aa10.98□□□□□ -0.65
SFR1-201ENST00000369727 VARSP26640 1264 aaKnown RBP10.98□□□□□ -0.65
SFR1-201ENST00000369727 FAM117AQ9C073 453 aa10.98□□□□□ -0.65
SFR1-201ENST00000369727 C11orf95C9JLR9 678 aaPredicted RBP10.97□□□□□ -0.65
SFR1-201ENST00000369727 RGL3Q3MIN7 710 aa10.97□□□□□ -0.65
SFR1-201ENST00000369727 HELBQ8NG08 1087 aaPredicted RBP10.97□□□□□ -0.65
SFR1-201ENST00000369727 PTCH1Q13635 1447 aa10.97□□□□□ -0.65
SFR1-201ENST00000369727 FOXJ1Q92949 421 aa10.96□□□□□ -0.65
SFR1-201ENST00000369727 ADGRF5Q8IZF2 1346 aa10.96□□□□□ -0.65
SFR1-201ENST00000369727 ADGRL3Q9HAR2 1447 aa10.96□□□□□ -0.65
SFR1-201ENST00000369727 PHLPP1O60346 1717 aa10.95□□□□□ -0.66
SFR1-201ENST00000369727 SKIV2LQ15477 1246 aaKnown RBP10.94□□□□□ -0.66
SFR1-201ENST00000369727 ILDR2Q71H61 639 aa10.94□□□□□ -0.66
SFR1-201ENST00000369727 DDRGK1Q96HY6 314 aa10.94□□□□□ -0.66
SFR1-201ENST00000369727 NALCNQ8IZF0 1738 aa10.94□□□□□ -0.66
SFR1-201ENST00000369727 PIK3C2GO75747 1445 aa10.94□□□□□ -0.66
SFR1-201ENST00000369727 SH3D19Q5HYK7 790 aa10.93□□□□□ -0.66
SFR1-201ENST00000369727 AHDC1Q5TGY3 1603 aaPredicted RBP10.93□□□□□ -0.66
SFR1-201ENST00000369727 MYOM2P54296 1465 aa10.93□□□□□ -0.66
SFR1-201ENST00000369727 MST1RQ04912 1400 aa10.93□□□□□ -0.66
SFR1-201ENST00000369727 ROBO2Q9HCK4 1378 aa10.93□□□□□ -0.66
SFR1-201ENST00000369727 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
SFR1-201ENST00000369727 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
SFR1-201ENST00000369727 FAM174AQ8TBP5 190 aa10.92□□□□□ -0.66
SFR1-201ENST00000369727 NRXN1Q9ULB1 1477 aa10.92□□□□□ -0.66
SFR1-201ENST00000369727 TECPR2O15040 1411 aa10.92□□□□□ -0.66
SFR1-201ENST00000369727 COL16A1Q07092 1604 aaPredicted RBP10.92□□□□□ -0.66
SFR1-201ENST00000369727 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
SFR1-201ENST00000369727 AGERQ15109 404 aa10.92□□□□□ -0.66
SFR1-201ENST00000369727 BRINP3Q76B58 766 aa10.92□□□□□ -0.66
SFR1-201ENST00000369727 MPNDQ8N594 471 aa10.92□□□□□ -0.66
SFR1-201ENST00000369727 LRPPRCP42704 1394 aaKnown RBP10.91□□□□□ -0.66
SFR1-201ENST00000369727 JCADQ9P266 1359 aa10.91□□□□□ -0.66
SFR1-201ENST00000369727 LAMC1P11047 1609 aa10.91□□□□□ -0.66
SFR1-201ENST00000369727 CAPN5O15484 640 aaPredicted RBP10.91□□□□□ -0.66
SFR1-201ENST00000369727 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
SFR1-201ENST00000369727 KNDC1Q76NI1 1749 aa10.91□□□□□ -0.66
SFR1-201ENST00000369727 ABCC11Q96J66 1382 aa10.9□□□□□ -0.66
SFR1-201ENST00000369727 ASXL1Q8IXJ9 1541 aa10.9□□□□□ -0.66
SFR1-201ENST00000369727 SNRPBP14678 240 aaKnown RBP10.9□□□□□ -0.66
SFR1-201ENST00000369727 NNTQ13423 1086 aa10.9□□□□□ -0.66
SFR1-201ENST00000369727 ARMC2Q8NEN0 867 aa10.9□□□□□ -0.66
SFR1-201ENST00000369727 C14orf93Q9H972 538 aaKnown RBP10.9□□□□□ -0.66
SFR1-201ENST00000369727 ARID5BQ14865 1188 aa10.89□□□□□ -0.67
SFR1-201ENST00000369727 TRIM47Q96LD4 638 aa10.89□□□□□ -0.67
SFR1-201ENST00000369727 SENP2Q9HC62 589 aa10.89□□□□□ -0.67
SFR1-201ENST00000369727 NHSL1Q5SYE7 1610 aa10.89□□□□□ -0.67
SFR1-201ENST00000369727 C1orf167Q5SNV9 1468 aa10.88□□□□□ -0.67
SFR1-201ENST00000369727 BMP1P13497 986 aa10.88□□□□□ -0.67
SFR1-201ENST00000369727 BPHLQ86WA6 291 aaPredicted RBP10.88□□□□□ -0.67
SFR1-201ENST00000369727 SIRT1Q96EB6 747 aa10.88□□□□□ -0.67
SFR1-201ENST00000369727 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.88□□□□□ -0.67
SFR1-201ENST00000369727 YTHDC2Q9H6S0 1430 aaKnown RBP10.88□□□□□ -0.67
SFR1-201ENST00000369727 CDC42BPGQ6DT37 1551 aa10.88□□□□□ -0.67
SFR1-201ENST00000369727 SOCS7O14512 581 aa10.87□□□□□ -0.67
SFR1-201ENST00000369727 TMEM132EQ6IEE7 984 aa10.87□□□□□ -0.67
SFR1-201ENST00000369727 STK26Q9P289 416 aa10.87□□□□□ -0.67
SFR1-201ENST00000369727 SHPRHQ149N8 1683 aa10.87□□□□□ -0.67
SFR1-201ENST00000369727 DHX57Q6P158 1386 aaKnown RBP10.87□□□□□ -0.67
SFR1-201ENST00000369727 SPATA31A6Q5VVP1 1343 aa10.87□□□□□ -0.67
SFR1-201ENST00000369727 ADH1CP00326 375 aa10.86□□□□□ -0.67
SFR1-201ENST00000369727 CFAP70Q5T0N1 1121 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms