RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 KLHL40Q2TBA0 621 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.66□□□□□ -0.54
SIM1-202ENST00000369208 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.54
SIM1-202ENST00000369208 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
SIM1-202ENST00000369208 MSL1Q68DK7 614 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 OTUD6BQ8N6M0 293 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
SIM1-202ENST00000369208 CCDC175P0C221 793 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 CEP126Q9P2H0 1117 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 RSPH14Q9UHP6 348 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 IGF1RP08069 1367 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 MAP2K1Q02750 393 aaPredicted RBP11.66□□□□□ -0.54
SIM1-202ENST00000369208 AFAP1Q8N556 730 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 UBAC1Q9BSL1 405 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 AKAP2Q9Y2D5 859 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 ZBTB12Q9Y330 459 aaPredicted RBP11.66□□□□□ -0.54
SIM1-202ENST00000369208 CAPN2P17655 700 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 NBPF11Q86T75 865 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 NCOA2Q15596 1464 aa11.66□□□□□ -0.54
SIM1-202ENST00000369208 PPP1R12BO60237 982 aaPredicted RBP11.65□□□□□ -0.54
SIM1-202ENST00000369208 LUC7L3O95232 432 aaKnown RBP11.65□□□□□ -0.54
SIM1-202ENST00000369208 CEP135Q66GS9 1140 aa11.65□□□□□ -0.54
SIM1-202ENST00000369208 C9orf84Q5VXU9 1444 aa11.65□□□□□ -0.54
SIM1-202ENST00000369208 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.54
SIM1-202ENST00000369208 MATR3P43243 847 aaKnown RBP eCLIP11.65□□□□□ -0.54
SIM1-202ENST00000369208 CLNS1AP54105 237 aaKnown RBP11.65□□□□□ -0.54
SIM1-202ENST00000369208 FOXD4L6Q3SYB3 417 aaPredicted RBP11.65□□□□□ -0.54
SIM1-202ENST00000369208 RNF187Q5TA31 235 aaPredicted RBP11.65□□□□□ -0.54
SIM1-202ENST00000369208 TMEM132EQ6IEE7 984 aa11.65□□□□□ -0.54
SIM1-202ENST00000369208 FOXD4L3Q6VB84 417 aaPredicted RBP11.65□□□□□ -0.54
SIM1-202ENST00000369208 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
SIM1-202ENST00000369208 NGLY1Q96IV0 654 aa11.65□□□□□ -0.54
SIM1-202ENST00000369208 CTCFLQ8NI51 663 aaPredicted RBP11.65□□□□□ -0.54
SIM1-202ENST00000369208 DRC1Q96MC2 740 aa11.65□□□□□ -0.54
SIM1-202ENST00000369208 WHAMMP3Q1A5X7 153 aa11.65□□□□□ -0.54
SIM1-202ENST00000369208 KRBA2Q6ZNG9 492 aa11.65□□□□□ -0.54
SIM1-202ENST00000369208 NOLC1Q14978 699 aaKnown RBP eCLIP11.65□□□□□ -0.54
SIM1-202ENST00000369208 CEP104O60308 925 aa11.65□□□□□ -0.55
SIM1-202ENST00000369208 LMNTD2Q8IXW0 634 aa11.65□□□□□ -0.55
SIM1-202ENST00000369208 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
SIM1-202ENST00000369208 CRACR2BQ8N4Y2 399 aaPredicted RBP11.64□□□□□ -0.55
SIM1-202ENST00000369208 AMOTQ4VCS5 1084 aa11.64□□□□□ -0.55
SIM1-202ENST00000369208 GCC1Q96CN9 775 aa11.64□□□□□ -0.55
SIM1-202ENST00000369208 SEC63Q9UGP8 760 aaKnown RBP11.64□□□□□ -0.55
SIM1-202ENST00000369208 PRKAR2BP31323 418 aa11.64□□□□□ -0.55
SIM1-202ENST00000369208 CCDC97Q96F63 343 aaPredicted RBP11.64□□□□□ -0.55
SIM1-202ENST00000369208 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
SIM1-202ENST00000369208 USH1CQ9Y6N9 552 aa11.64□□□□□ -0.55
SIM1-202ENST00000369208 SUPT6HQ7KZ85 1726 aaKnown RBP11.64□□□□□ -0.55
SIM1-202ENST00000369208 TWISTNBQ3B726 338 aaPredicted RBP11.64□□□□□ -0.55
SIM1-202ENST00000369208 RAI14Q9P0K7 980 aa11.64□□□□□ -0.55
SIM1-202ENST00000369208 VCXQ9H320 206 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 A0A087WZG4 1122 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 SFPQP23246 707 aaKnown RBP eCLIP11.63□□□□□ -0.55
SIM1-202ENST00000369208 GEMIN8Q9NWZ8 242 aaKnown RBP11.63□□□□□ -0.55
SIM1-202ENST00000369208 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 SMC1AQ14683 1233 aaKnown RBP11.63□□□□□ -0.55
SIM1-202ENST00000369208 SCLT1Q96NL6 688 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 TNMDQ9H2S6 317 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 PPP6R1Q9UPN7 881 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 LUC7L2Q9Y383 392 aaKnown RBP11.63□□□□□ -0.55
SIM1-202ENST00000369208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
SIM1-202ENST00000369208 C6orf163Q5TEZ5 329 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 CCDC181Q5TID7 509 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 WDR78Q5VTH9 848 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 ZNF365Q70YC5 407 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
SIM1-202ENST00000369208 RMDN2Q96LZ7 410 aa11.63□□□□□ -0.55
SIM1-202ENST00000369208 NSRP1Q9H0G5 558 aaKnown RBP11.63□□□□□ -0.55
SIM1-202ENST00000369208 KIF5CO60282 957 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 KRT32Q14532 448 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
SIM1-202ENST00000369208 STK38Q15208 465 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 NBPF6Q5VWK0 638 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 NBPF5PQ86XG9 351 aaPredicted RBP11.62□□□□□ -0.55
SIM1-202ENST00000369208 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 NBPF4Q96M43 638 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 CFAP45Q9UL16 551 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 SLC8A1P32418 973 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 CETN2P41208 172 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 ANKIB1Q9P2G1 1089 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 MYO1BO43795 1136 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 GCKP35557 465 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 IFIT1P09914 478 aaKnown RBP11.62□□□□□ -0.55
SIM1-202ENST00000369208 SEPT7Q16181 437 aaKnown RBP11.62□□□□□ -0.55
SIM1-202ENST00000369208 CCDC65Q8IXS2 484 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 CUL5Q93034 780 aa11.62□□□□□ -0.55
SIM1-202ENST00000369208 TOM1O60784 492 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 NLRP5P59047 1200 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 PDILTQ8N807 584 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 CCDC150Q8NCX0 1101 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 OPA1O60313 960 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 FOSBP53539 338 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 SULT6B1Q6IMI4 303 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 PPFIBP1Q86W92 1011 aa11.61□□□□□ -0.55
SIM1-202ENST00000369208 GBP7Q8N8V2 638 aaPredicted RBP11.61□□□□□ -0.55
SIM1-202ENST00000369208 GCOM1H8Y6P7 765 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms