RNA–Protein interactions for RNA: ENST00000368393.7

MUC1-208, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-208ENST00000368393 WDR63Q8IWG1 891 aa17.18■□□□□ 0.34
MUC1-208ENST00000368393 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
MUC1-208ENST00000368393 TUBGCP6Q96RT7 1819 aa17.17■□□□□ 0.34
MUC1-208ENST00000368393 NBPF26B4DH59 902 aa17.17■□□□□ 0.34
MUC1-208ENST00000368393 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
MUC1-208ENST00000368393 NBPF10Q6P3W6 841 aaKnown RBP17.17■□□□□ 0.34
MUC1-208ENST00000368393 NBPF15Q8N660 670 aa17.17■□□□□ 0.34
MUC1-208ENST00000368393 ZBTB1Q9Y2K1 713 aa17.17■□□□□ 0.34
MUC1-208ENST00000368393 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
MUC1-208ENST00000368393 SGIP1Q9BQI5 828 aa17.16■□□□□ 0.34
MUC1-208ENST00000368393 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
MUC1-208ENST00000368393 SOS1Q07889 1333 aaPredicted RBP17.16■□□□□ 0.34
MUC1-208ENST00000368393 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
MUC1-208ENST00000368393 A1BGP04217 495 aa17.15■□□□□ 0.34
MUC1-208ENST00000368393 SSFA2P28290 1259 aa17.15■□□□□ 0.34
MUC1-208ENST00000368393 PDIA6Q15084 440 aa17.15■□□□□ 0.34
MUC1-208ENST00000368393 CCDC87Q9NVE4 849 aa17.15■□□□□ 0.34
MUC1-208ENST00000368393 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
MUC1-208ENST00000368393 UBR3Q6ZT12 1888 aa17.15■□□□□ 0.34
MUC1-208ENST00000368393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.14■□□□□ 0.33
MUC1-208ENST00000368393 GNAI1P63096 354 aa17.14■□□□□ 0.33
MUC1-208ENST00000368393 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
MUC1-208ENST00000368393 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
MUC1-208ENST00000368393 GNPATO15228 680 aa17.13■□□□□ 0.33
MUC1-208ENST00000368393 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
MUC1-208ENST00000368393 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
MUC1-208ENST00000368393 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
MUC1-208ENST00000368393 AK7Q96M32 723 aa17.13■□□□□ 0.33
MUC1-208ENST00000368393 PTGER2P43116 358 aa17.12■□□□□ 0.33
MUC1-208ENST00000368393 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
MUC1-208ENST00000368393 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
MUC1-208ENST00000368393 HMGB2P26583 209 aaKnown RBP17.11■□□□□ 0.33
MUC1-208ENST00000368393 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
MUC1-208ENST00000368393 BCL2L12Q9HB09 334 aa17.11■□□□□ 0.33
MUC1-208ENST00000368393 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
MUC1-208ENST00000368393 FANCIQ9NVI1 1328 aa17.11■□□□□ 0.33
MUC1-208ENST00000368393 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
MUC1-208ENST00000368393 STARD3NLO95772 234 aa17.1■□□□□ 0.33
MUC1-208ENST00000368393 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
MUC1-208ENST00000368393 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
MUC1-208ENST00000368393 RTCBQ9Y3I0 505 aaKnown RBP17.1■□□□□ 0.33
MUC1-208ENST00000368393 HOXB7P09629 217 aa17.09■□□□□ 0.33
MUC1-208ENST00000368393 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
MUC1-208ENST00000368393 DUSP27Q5VZP5 1158 aa17.09■□□□□ 0.33
MUC1-208ENST00000368393 FLAD1Q8NFF5 587 aa17.09■□□□□ 0.33
MUC1-208ENST00000368393 SLC16A10Q8TF71 515 aa17.09■□□□□ 0.33
MUC1-208ENST00000368393 PHF14O94880 888 aa17.08■□□□□ 0.32
MUC1-208ENST00000368393 ZBTB7AO95365 584 aa17.08■□□□□ 0.32
MUC1-208ENST00000368393 GYS1P13807 737 aa17.08■□□□□ 0.32
MUC1-208ENST00000368393 CANXP27824 592 aaKnown RBP17.08■□□□□ 0.32
MUC1-208ENST00000368393 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
MUC1-208ENST00000368393 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.32
MUC1-208ENST00000368393 COL15A1P39059 1388 aa17.07■□□□□ 0.32
MUC1-208ENST00000368393 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
MUC1-208ENST00000368393 MTFR1LQ9H019 292 aa17.07■□□□□ 0.32
MUC1-208ENST00000368393 SRP68Q9UHB9 627 aaKnown RBP17.07■□□□□ 0.32
MUC1-208ENST00000368393 ERBB4Q15303 1308 aa17.06■□□□□ 0.32
MUC1-208ENST00000368393 VAMP4O75379 141 aa17.06■□□□□ 0.32
MUC1-208ENST00000368393 NARFQ9UHQ1 456 aa17.06■□□□□ 0.32
MUC1-208ENST00000368393 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
MUC1-208ENST00000368393 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
MUC1-208ENST00000368393 CAMTA2O94983 1202 aa17.04■□□□□ 0.32
MUC1-208ENST00000368393 ANXA1P04083 346 aa17.04■□□□□ 0.32
MUC1-208ENST00000368393 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
MUC1-208ENST00000368393 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
MUC1-208ENST00000368393 FKBP8Q14318 412 aa17.04■□□□□ 0.32
MUC1-208ENST00000368393 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
MUC1-208ENST00000368393 ELL2O00472 640 aaPredicted RBP17.03■□□□□ 0.32
MUC1-208ENST00000368393 TM4SF1P30408 202 aa17.03■□□□□ 0.32
MUC1-208ENST00000368393 TTLL7Q6ZT98 887 aa17.03■□□□□ 0.32
MUC1-208ENST00000368393 E9PSI1 815 aa17.02■□□□□ 0.32
MUC1-208ENST00000368393 EIF2S2P20042 333 aaKnown RBP17.02■□□□□ 0.32
MUC1-208ENST00000368393 USPL1Q5W0Q7 1092 aa17.02■□□□□ 0.32
MUC1-208ENST00000368393 MSL1Q68DK7 614 aa17.02■□□□□ 0.32
MUC1-208ENST00000368393 DDX21Q9NR30 783 aaKnown RBP eCLIP17.02■□□□□ 0.32
MUC1-208ENST00000368393 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
MUC1-208ENST00000368393 LRP5O75197 1615 aa17.02■□□□□ 0.31
MUC1-208ENST00000368393 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
MUC1-208ENST00000368393 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
MUC1-208ENST00000368393 SPON1Q9HCB6 807 aa17.01■□□□□ 0.31
MUC1-208ENST00000368393 CHPF2Q9P2E5 772 aa17.01■□□□□ 0.31
MUC1-208ENST00000368393 RGL2O15211 777 aa17■□□□□ 0.31
MUC1-208ENST00000368393 RFC4P35249 363 aa17■□□□□ 0.31
MUC1-208ENST00000368393 DDR1Q08345 913 aa17■□□□□ 0.31
MUC1-208ENST00000368393 HLFQ16534 295 aa17■□□□□ 0.31
MUC1-208ENST00000368393 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
MUC1-208ENST00000368393 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
MUC1-208ENST00000368393 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
MUC1-208ENST00000368393 A0A087WZG4 1122 aa16.99■□□□□ 0.31
MUC1-208ENST00000368393 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
MUC1-208ENST00000368393 GOLGB1Q14789 3259 aaKnown RBP16.99■□□□□ 0.31
MUC1-208ENST00000368393 MYL6BP14649 208 aa16.98■□□□□ 0.31
MUC1-208ENST00000368393 NFIXQ14938 502 aa16.98■□□□□ 0.31
MUC1-208ENST00000368393 DZIP3Q86Y13 1208 aaKnown RBP16.98■□□□□ 0.31
MUC1-208ENST00000368393 NLGN1Q8N2Q7 840 aa16.98■□□□□ 0.31
MUC1-208ENST00000368393 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
MUC1-208ENST00000368393 PHAXQ9H814 394 aaKnown RBP16.97■□□□□ 0.31
MUC1-208ENST00000368393 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
MUC1-208ENST00000368393 UTRNP46939 3433 aa16.97■□□□□ 0.31
MUC1-208ENST00000368393 MAP3K15Q6ZN16 1313 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms