RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 PDZRN3Q9UPQ7 1066 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
SPTA1-201ENST00000368147 DPH6Q7L8W6 267 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 MAP3K2Q9Y2U5 619 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 ZBED9Q6R2W3 1325 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 ANKRD24Q8TF21 1146 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 CCDC7Q96M83 1385 aa8.24□□□□□ -1.09
SPTA1-201ENST00000368147 ZNHIT6Q9NWK9 470 aaKnown RBP8.24□□□□□ -1.09
SPTA1-201ENST00000368147 ERICH3Q5RHP9 1530 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 LRPPRCP42704 1394 aaKnown RBP8.23□□□□□ -1.09
SPTA1-201ENST00000368147 DNA2P51530 1060 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 GTPBP4Q9BZE4 634 aaKnown RBP8.23□□□□□ -1.09
SPTA1-201ENST00000368147 IQCEQ6IPM2 695 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 TMX1Q9H3N1 280 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 PDRG1Q9NUG6 133 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 FERMT2Q96AC1 680 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 SLC52A1Q9NWF4 448 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 ZNF287Q9HBT7 754 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 FAM43AQ8N2R8 423 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 BICD1Q96G01 975 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 ZMYND15Q9H091 742 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 AKAP2Q9Y2D5 859 aa8.23□□□□□ -1.09
SPTA1-201ENST00000368147 CSPG5O95196 566 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 CCDC150Q8NCX0 1101 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 FAM212AQ96EL1 285 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 SWAP70Q9UH65 585 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 KLHL10Q6JEL2 608 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 WDR66Q8TBY9 1149 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 ADGRL1O94910 1474 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 ERLIN1O75477 346 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 SYNJ1O43426 1573 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 HMGB3O15347 200 aaKnown RBP8.22□□□□□ -1.09
SPTA1-201ENST00000368147 TAF7Q15545 349 aaPredicted RBP8.22□□□□□ -1.09
SPTA1-201ENST00000368147 PPFIBP1Q86W92 1011 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 COMMD10Q9Y6G5 202 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 CAMK4Q16566 473 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 A0A087WZG4 1122 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 C11orf95C9JLR9 678 aaPredicted RBP8.22□□□□□ -1.09
SPTA1-201ENST00000368147 KIF20AO95235 890 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 ANXA1P04083 346 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 SP4Q02446 784 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 LARP1BQ659C4 914 aaKnown RBP8.22□□□□□ -1.09
SPTA1-201ENST00000368147 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 CABP5Q9NP86 173 aa8.22□□□□□ -1.09
SPTA1-201ENST00000368147 NUCB2P80303 420 aa8.21□□□□□ -1.09
SPTA1-201ENST00000368147 CTNNBL1Q8WYA6 563 aaPredicted RBP8.21□□□□□ -1.09
SPTA1-201ENST00000368147 KIF3CO14782 793 aa8.21□□□□□ -1.09
SPTA1-201ENST00000368147 TERF1P54274 439 aa8.21□□□□□ -1.09
SPTA1-201ENST00000368147 CCT2P78371 535 aaKnown RBP8.21□□□□□ -1.09
SPTA1-201ENST00000368147 GPR162Q16538 588 aa8.21□□□□□ -1.09
SPTA1-201ENST00000368147 MSL1Q68DK7 614 aa8.21□□□□□ -1.09
SPTA1-201ENST00000368147 ZBTB21Q9ULJ3 1066 aa8.21□□□□□ -1.09
SPTA1-201ENST00000368147 NLRP5P59047 1200 aa8.21□□□□□ -1.09
SPTA1-201ENST00000368147 MAP3K12Q12852 859 aa8.21□□□□□ -1.09
SPTA1-201ENST00000368147 BMS1Q14692 1282 aaKnown RBP8.21□□□□□ -1.09
SPTA1-201ENST00000368147 HAND2P61296 217 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 TOPBP1Q92547 1522 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 SLC39A6Q13433 755 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 BLOC1S2Q6QNY1 142 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 PPP1R42Q7Z4L9 355 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 SLF2Q8IX21 1173 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 AKNAD1Q5T1N1 836 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 OGFOD1Q8N543 542 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 TNMDQ9H2S6 317 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 EMILIN1Q9Y6C2 1016 aa8.21□□□□□ -1.1
SPTA1-201ENST00000368147 MACROD2A1Z1Q3 448 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 MRPS9P82933 396 aaKnown RBP8.2□□□□□ -1.1
SPTA1-201ENST00000368147 CCDC61Q9Y6R9 512 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 CCDC6Q16204 474 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 CCDC24Q8N4L8 307 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 DDX17Q92841 729 aaKnown RBP8.2□□□□□ -1.1
SPTA1-201ENST00000368147 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPTA1-201ENST00000368147 EHBP1L1Q8N3D4 1523 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 RFX1P22670 979 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 SMC1AQ14683 1233 aaKnown RBP8.2□□□□□ -1.1
SPTA1-201ENST00000368147 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
SPTA1-201ENST00000368147 HDAC9Q9UKV0 1011 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 HLA-DOAP06340 250 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 DDB1Q16531 1140 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 ATP2B3Q16720 1220 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 CIZ1Q9ULV3 898 aaPredicted RBP8.2□□□□□ -1.1
SPTA1-201ENST00000368147 ATF7IPQ6VMQ6 1270 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 SYCP3Q8IZU3 236 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 NASPP49321 788 aaPredicted RBP8.2□□□□□ -1.1
SPTA1-201ENST00000368147 NIP7Q9Y221 180 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPTA1-201ENST00000368147 TSPY2A6NKD2 308 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 GOLIM4O00461 696 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 CDKL5O76039 1030 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 KIAA1328Q86T90 577 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 EHMT1Q9H9B1 1298 aa8.2□□□□□ -1.1
SPTA1-201ENST00000368147 MYCP01106 439 aaPredicted RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 EIF5P55010 431 aaKnown RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 DNAI2Q9GZS0 605 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 LRRFIP2Q9Y608 721 aaKnown RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 SLC12A7Q9Y666 1083 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 ZNF213O14771 459 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 LUZP1Q86V48 1076 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 TCHPQ9BT92 498 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 TSHZ2Q9NRE2 1034 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms