RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 XAGE2Q96GT9 111 aa8.75□□□□□ -1.01
RNU4-4P-201ENST00000364588 GRIP2Q9C0E4 1043 aa8.75□□□□□ -1.01
RNU4-4P-201ENST00000364588 GOLGA3Q08378 1498 aa8.75□□□□□ -1.01
RNU4-4P-201ENST00000364588 ABCA8O94911 1581 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 ATP1A2P50993 1020 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 GDF10P55107 478 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 GTF2IP78347 998 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 PSME1Q06323 249 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 TLR1Q15399 786 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 GNASQ5JWF2 1037 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 TAS1R3Q7RTX0 852 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 ZSCAN10Q96SZ4 725 aaPredicted RBP8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 GTF3C3Q9Y5Q9 886 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 PRXQ9BXM0 1461 aa8.74□□□□□ -1.01
RNU4-4P-201ENST00000364588 ARID3CA6NKF2 412 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 WIPF1O43516 503 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 INHAP05111 366 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 ITGA6P23229 1130 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 SCNN1DP51172 638 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 CENPCQ03188 943 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 TBC1D9Q6ZT07 1266 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 DEPDC4Q8N2C3 294 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 HRH3Q9Y5N1 445 aa8.73□□□□□ -1.01
RNU4-4P-201ENST00000364588 SENP3-EIF4A1A0A087X0R7 540 aa8.72□□□□□ -1.01
RNU4-4P-201ENST00000364588 RHOQP17081 205 aa8.72□□□□□ -1.01
RNU4-4P-201ENST00000364588 TMEM214Q6NUQ4 689 aaKnown RBP8.72□□□□□ -1.01
RNU4-4P-201ENST00000364588 NBPF10Q6P3W6 841 aaKnown RBP8.72□□□□□ -1.01
RNU4-4P-201ENST00000364588 NBPF15Q8N660 670 aa8.72□□□□□ -1.01
RNU4-4P-201ENST00000364588 FHDC1Q9C0D6 1143 aaPredicted RBP8.72□□□□□ -1.01
RNU4-4P-201ENST00000364588 CFAP43Q8NDM7 1665 aa8.72□□□□□ -1.01
RNU4-4P-201ENST00000364588 CD109Q6YHK3 1445 aa8.71□□□□□ -1.01
RNU4-4P-201ENST00000364588 DYRK1BQ9Y463 629 aa8.71□□□□□ -1.02
RNU4-4P-201ENST00000364588 PCDHGA11Q9Y5H2 935 aa8.71□□□□□ -1.02
RNU4-4P-201ENST00000364588 ERBB4Q15303 1308 aa8.71□□□□□ -1.02
RNU4-4P-201ENST00000364588 BACH1O14867 736 aa8.7□□□□□ -1.02
RNU4-4P-201ENST00000364588 POU4F2Q12837 409 aa8.7□□□□□ -1.02
RNU4-4P-201ENST00000364588 RHBDD1Q8TEB9 315 aa8.7□□□□□ -1.02
RNU4-4P-201ENST00000364588 NANOS1Q8WY41 292 aaKnown RBP8.7□□□□□ -1.02
RNU4-4P-201ENST00000364588 MAFBQ9Y5Q3 323 aaPredicted RBP8.7□□□□□ -1.02
RNU4-4P-201ENST00000364588 MAGI3Q5TCQ9 1506 aa8.7□□□□□ -1.02
RNU4-4P-201ENST00000364588 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
RNU4-4P-201ENST00000364588 GMCL1Q96IK5 515 aa8.69□□□□□ -1.02
RNU4-4P-201ENST00000364588 TIMMDC1Q9NPL8 285 aa8.69□□□□□ -1.02
RNU4-4P-201ENST00000364588 A0A1B0GTH6 734 aa8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 CDC14CA4D256 554 aa8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 PALM3A6NDB9 673 aaPredicted RBP8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 TMEM229AB2RXF0 380 aa8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 GMPRP36959 345 aa8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 INSM1Q01101 510 aaPredicted RBP8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 PPARGC1BQ86YN6 1023 aaKnown RBP8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 PPP1R12CQ9BZL4 782 aa8.68□□□□□ -1.02
RNU4-4P-201ENST00000364588 H7C1W4 665 aa8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 KIF21BO75037 1637 aa8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 ATP10BO94823 1461 aa8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 RANGAP1P46060 587 aaPredicted RBP8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 SMTNP53814 917 aa8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 ZMYND15Q9H091 742 aa8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 DNAAF2Q9NVR5 837 aaKnown RBP8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 MKRN1Q9UHC7 482 aaKnown RBP8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 RBM19Q9Y4C8 960 aaKnown RBP8.67□□□□□ -1.02
RNU4-4P-201ENST00000364588 SAMD9Q5K651 1589 aa8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 MTFR1Q15390 333 aa8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 C4orf17Q53FE4 359 aa8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 FAM9AQ8IZU1 332 aaPredicted RBP8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 LARGE2Q8N3Y3 721 aa8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 OGFOD1Q8N543 542 aa8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 TPCN2Q8NHX9 752 aa8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 ZNF358Q9NW07 568 aa8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
RNU4-4P-201ENST00000364588 HECW2Q9P2P5 1572 aa8.65□□□□□ -1.02
RNU4-4P-201ENST00000364588 A6NJY4 79 aa8.65□□□□□ -1.02
RNU4-4P-201ENST00000364588 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
RNU4-4P-201ENST00000364588 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
RNU4-4P-201ENST00000364588 SIX5Q8N196 739 aa8.65□□□□□ -1.02
RNU4-4P-201ENST00000364588 GAS2L1Q99501 681 aaPredicted RBP8.65□□□□□ -1.02
RNU4-4P-201ENST00000364588 NIFKQ9BYG3 293 aaKnown RBP8.65□□□□□ -1.02
RNU4-4P-201ENST00000364588 ZNF777Q9ULD5 760 aaPredicted RBP8.65□□□□□ -1.02
RNU4-4P-201ENST00000364588 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.03
RNU4-4P-201ENST00000364588 F11P03951 625 aa8.64□□□□□ -1.03
RNU4-4P-201ENST00000364588 CLDN10P78369 228 aa8.64□□□□□ -1.03
RNU4-4P-201ENST00000364588 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
RNU4-4P-201ENST00000364588 ABCA9Q8IUA7 1624 aa8.64□□□□□ -1.03
RNU4-4P-201ENST00000364588 M0R2N6 131 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 PHKA2P46019 1235 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 PLA2G4AP47712 749 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 LBRQ14739 615 aaKnown RBP8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 NBPF1Q3BBV0 1214 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 CCDC102BQ68D86 513 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 FOXR1Q6PIV2 292 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 VWA5B2Q8N398 1253 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 C1orf216Q8TAB5 229 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 ZNF594Q96JF6 807 aaPredicted RBP8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 KIAA1024Q9UPX6 916 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 ARAP3Q8WWN8 1544 aa8.63□□□□□ -1.03
RNU4-4P-201ENST00000364588 CDK2AP1O14519 115 aa8.62□□□□□ -1.03
RNU4-4P-201ENST00000364588 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms