RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 KCTD15Q96SI1 283 aaPredicted RBP7.53□□□□□ -1.2
RNU6-839P-201ENST00000363347 LRRC4BQ9NT99 713 aa7.53□□□□□ -1.2
RNU6-839P-201ENST00000363347 GPR25O00155 361 aa7.52□□□□□ -1.21
RNU6-839P-201ENST00000363347 FOXR1Q6PIV2 292 aa7.52□□□□□ -1.21
RNU6-839P-201ENST00000363347 LYSMD3Q7Z3D4 306 aa7.52□□□□□ -1.21
RNU6-839P-201ENST00000363347 LARGE2Q8N3Y3 721 aa7.52□□□□□ -1.21
RNU6-839P-201ENST00000363347 MFAP1P55081 439 aaKnown RBP7.51□□□□□ -1.21
RNU6-839P-201ENST00000363347 FAM69CQ0P6D2 419 aa7.51□□□□□ -1.21
RNU6-839P-201ENST00000363347 ALYREFQ86V81 257 aaKnown RBP7.51□□□□□ -1.21
RNU6-839P-201ENST00000363347 TRIM22Q8IYM9 498 aa7.51□□□□□ -1.21
RNU6-839P-201ENST00000363347 SIX5Q8N196 739 aa7.51□□□□□ -1.21
RNU6-839P-201ENST00000363347 CLP1Q92989 425 aaKnown RBP7.51□□□□□ -1.21
RNU6-839P-201ENST00000363347 SLAIN2Q9P270 581 aa7.51□□□□□ -1.21
RNU6-839P-201ENST00000363347 USP4Q13107 963 aa7.5□□□□□ -1.21
RNU6-839P-201ENST00000363347 INTS6LQ5JSJ4 861 aaKnown RBP7.5□□□□□ -1.21
RNU6-839P-201ENST00000363347 TPCN2Q8NHX9 752 aa7.5□□□□□ -1.21
RNU6-839P-201ENST00000363347 SIRT1Q96EB6 747 aa7.5□□□□□ -1.21
RNU6-839P-201ENST00000363347 RBM19Q9Y4C8 960 aaKnown RBP7.5□□□□□ -1.21
RNU6-839P-201ENST00000363347 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
RNU6-839P-201ENST00000363347 ATP2B4P23634 1241 aa7.49□□□□□ -1.21
RNU6-839P-201ENST00000363347 SEC13P55735 322 aa7.49□□□□□ -1.21
RNU6-839P-201ENST00000363347 SWI5Q1ZZU3 235 aa7.49□□□□□ -1.21
RNU6-839P-201ENST00000363347 CCDC102BQ68D86 513 aa7.49□□□□□ -1.21
RNU6-839P-201ENST00000363347 PHLDB3Q6NSJ2 640 aa7.49□□□□□ -1.21
RNU6-839P-201ENST00000363347 CCDC125Q86Z20 511 aa7.49□□□□□ -1.21
RNU6-839P-201ENST00000363347 PCDHGA11Q9Y5H2 935 aa7.49□□□□□ -1.21
RNU6-839P-201ENST00000363347 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
RNU6-839P-201ENST00000363347 ERVH48-1M5A8F1 160 aa7.48□□□□□ -1.21
RNU6-839P-201ENST00000363347 DKK1O94907 266 aa7.48□□□□□ -1.21
RNU6-839P-201ENST00000363347 MYCP01106 439 aaPredicted RBP7.48□□□□□ -1.21
RNU6-839P-201ENST00000363347 ADH1AP07327 375 aa7.48□□□□□ -1.21
RNU6-839P-201ENST00000363347 SSFA2P28290 1259 aa7.48□□□□□ -1.21
RNU6-839P-201ENST00000363347 SNRPNP63162 240 aaKnown RBP7.48□□□□□ -1.21
RNU6-839P-201ENST00000363347 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
RNU6-839P-201ENST00000363347 OIP5O43482 229 aa7.47□□□□□ -1.21
RNU6-839P-201ENST00000363347 PRMT3O60678 531 aa7.47□□□□□ -1.21
RNU6-839P-201ENST00000363347 SCTRP47872 440 aa7.47□□□□□ -1.21
RNU6-839P-201ENST00000363347 SND1Q7KZF4 910 aaKnown RBP eCLIP7.47□□□□□ -1.21
RNU6-839P-201ENST00000363347 NPM2Q86SE8 214 aaKnown RBP7.47□□□□□ -1.21
RNU6-839P-201ENST00000363347 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
RNU6-839P-201ENST00000363347 MKL2Q9ULH7 1088 aa7.47□□□□□ -1.21
RNU6-839P-201ENST00000363347 GNEQ9Y223 722 aaKnown RBP7.47□□□□□ -1.21
RNU6-839P-201ENST00000363347 RHOQP17081 205 aa7.46□□□□□ -1.22
RNU6-839P-201ENST00000363347 DBN1Q16643 649 aa7.46□□□□□ -1.22
RNU6-839P-201ENST00000363347 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
RNU6-839P-201ENST00000363347 TRERF1Q96PN7 1200 aa7.46□□□□□ -1.22
RNU6-839P-201ENST00000363347 NSFL1CQ9UNZ2 370 aaKnown RBP7.46□□□□□ -1.22
RNU6-839P-201ENST00000363347 LGR5O75473 907 aa7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 MX2P20592 715 aa7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 COL8A1P27658 744 aa7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 PTGIRP43119 386 aa7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 RANGAP1P46060 587 aaPredicted RBP7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 PRICKLE2Q7Z3G6 844 aa7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 TXNDC2Q86VQ3 553 aa7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 ZNF784Q8NCA9 323 aaPredicted RBP7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 GTPBP3Q969Y2 492 aaKnown RBP7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 ESF1Q9H501 851 aaKnown RBP7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 CYLDQ9NQC7 956 aa7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 MTMR7Q9Y216 660 aa7.45□□□□□ -1.22
RNU6-839P-201ENST00000363347 H7C1W4 665 aa7.44□□□□□ -1.22
RNU6-839P-201ENST00000363347 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
RNU6-839P-201ENST00000363347 CCDC27Q2M243 656 aa7.44□□□□□ -1.22
RNU6-839P-201ENST00000363347 CC2D2BQ6DHV5 1058 aa7.44□□□□□ -1.22
RNU6-839P-201ENST00000363347 KDF1Q8NAX2 398 aaPredicted RBP7.44□□□□□ -1.22
RNU6-839P-201ENST00000363347 PRIMPOLQ96LW4 560 aa7.44□□□□□ -1.22
RNU6-839P-201ENST00000363347 KRTAP4-12Q9BQ66 201 aa7.44□□□□□ -1.22
RNU6-839P-201ENST00000363347 TMPRSS4Q9NRS4 437 aa7.44□□□□□ -1.22
RNU6-839P-201ENST00000363347 SCNN1AP37088 669 aa7.43□□□□□ -1.22
RNU6-839P-201ENST00000363347 ERVK-9P63128 1117 aa7.43□□□□□ -1.22
RNU6-839P-201ENST00000363347 TSEN2Q8NCE0 465 aaKnown RBP7.43□□□□□ -1.22
RNU6-839P-201ENST00000363347 RGS22Q8NE09 1264 aa7.43□□□□□ -1.22
RNU6-839P-201ENST00000363347 HINFPQ9BQA5 517 aa7.43□□□□□ -1.22
RNU6-839P-201ENST00000363347 ADD1P35611 737 aaKnown RBP7.42□□□□□ -1.22
RNU6-839P-201ENST00000363347 SERPINB4P48594 390 aa7.42□□□□□ -1.22
RNU6-839P-201ENST00000363347 RNF144AP50876 292 aaPredicted RBP7.42□□□□□ -1.22
RNU6-839P-201ENST00000363347 OCLNQ16625 522 aa7.42□□□□□ -1.22
RNU6-839P-201ENST00000363347 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.42□□□□□ -1.22
RNU6-839P-201ENST00000363347 OXCT2Q9BYC2 517 aaPredicted RBP7.42□□□□□ -1.22
RNU6-839P-201ENST00000363347 OSBPL3Q9H4L5 887 aa7.42□□□□□ -1.22
RNU6-839P-201ENST00000363347 CXXC1Q9P0U4 656 aaPredicted RBP7.42□□□□□ -1.22
RNU6-839P-201ENST00000363347 SHISA8B8ZZ34 492 aa7.41□□□□□ -1.22
RNU6-839P-201ENST00000363347 LILRA1O75019 489 aa7.41□□□□□ -1.22
RNU6-839P-201ENST00000363347 STAU1O95793 577 aaKnown RBP7.41□□□□□ -1.22
RNU6-839P-201ENST00000363347 ITGB7P26010 798 aa7.41□□□□□ -1.22
RNU6-839P-201ENST00000363347 MAP2K3P46734 347 aa7.41□□□□□ -1.22
RNU6-839P-201ENST00000363347 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
RNU6-839P-201ENST00000363347 ZNF358Q9NW07 568 aa7.41□□□□□ -1.22
RNU6-839P-201ENST00000363347 DYRK1BQ9Y463 629 aa7.41□□□□□ -1.22
RNU6-839P-201ENST00000363347 ZMYM1Q5SVZ6 1142 aa7.4□□□□□ -1.22
RNU6-839P-201ENST00000363347 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
RNU6-839P-201ENST00000363347 FOXD4L4Q8WXT5 416 aaPredicted RBP7.4□□□□□ -1.22
RNU6-839P-201ENST00000363347 TRIM52Q96A61 297 aa7.4□□□□□ -1.22
RNU6-839P-201ENST00000363347 RRAGCQ9HB90 399 aa7.4□□□□□ -1.22
RNU6-839P-201ENST00000363347 TMEM229AB2RXF0 380 aa7.39□□□□□ -1.23
RNU6-839P-201ENST00000363347 M0R2N6 131 aa7.39□□□□□ -1.23
RNU6-839P-201ENST00000363347 SCNN1DP51172 638 aa7.39□□□□□ -1.23
RNU6-839P-201ENST00000363347 GDF10P55107 478 aa7.39□□□□□ -1.23
RNU6-839P-201ENST00000363347 MKNK1Q9BUB5 465 aa7.39□□□□□ -1.23
RNU6-839P-201ENST00000363347 SOWAHDA6NJG2 315 aa7.38□□□□□ -1.23
RNU6-839P-201ENST00000363347 C1QTNF9BB2RNN3 333 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms