RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 EXOSC9Q06265 439 aaKnown RBP16.29■□□□□ 0.2
CNTF-201ENST00000361987 TSPYL6Q8N831 410 aa16.29■□□□□ 0.2
CNTF-201ENST00000361987 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
CNTF-201ENST00000361987 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
CNTF-201ENST00000361987 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
CNTF-201ENST00000361987 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
CNTF-201ENST00000361987 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
CNTF-201ENST00000361987 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
CNTF-201ENST00000361987 RREB1Q92766 1687 aa16.28■□□□□ 0.2
CNTF-201ENST00000361987 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.2
CNTF-201ENST00000361987 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
CNTF-201ENST00000361987 SMIM5Q71RC9 77 aa16.27■□□□□ 0.2
CNTF-201ENST00000361987 C5P01031 1676 aa16.27■□□□□ 0.19
CNTF-201ENST00000361987 PHF14O94880 888 aa16.27■□□□□ 0.19
CNTF-201ENST00000361987 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.19
CNTF-201ENST00000361987 ZBTB1Q9Y2K1 713 aa16.27■□□□□ 0.19
CNTF-201ENST00000361987 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.19
CNTF-201ENST00000361987 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.19
CNTF-201ENST00000361987 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
CNTF-201ENST00000361987 ZNF831Q5JPB2 1677 aa16.26■□□□□ 0.19
CNTF-201ENST00000361987 TAF1LQ8IZX4 1826 aa16.26■□□□□ 0.19
CNTF-201ENST00000361987 R3HDM1Q15032 1099 aaKnown RBP16.26■□□□□ 0.19
CNTF-201ENST00000361987 TRMT2AQ8IZ69 625 aaKnown RBP16.26■□□□□ 0.19
CNTF-201ENST00000361987 TJP1Q07157 1748 aa16.25■□□□□ 0.19
CNTF-201ENST00000361987 HOXB7P09629 217 aa16.25■□□□□ 0.19
CNTF-201ENST00000361987 HDGFL1Q5TGJ6 251 aa16.25■□□□□ 0.19
CNTF-201ENST00000361987 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
CNTF-201ENST00000361987 PSDA5PKW4 1024 aaPredicted RBP16.25■□□□□ 0.19
CNTF-201ENST00000361987 RPS6KA4O75676 772 aa16.25■□□□□ 0.19
CNTF-201ENST00000361987 AMIGO3Q86WK7 504 aa16.25■□□□□ 0.19
CNTF-201ENST00000361987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
CNTF-201ENST00000361987 MSH5O43196 834 aa16.24■□□□□ 0.19
CNTF-201ENST00000361987 MYL6BP14649 208 aa16.24■□□□□ 0.19
CNTF-201ENST00000361987 TRAPPC3LQ5T215 181 aa16.24■□□□□ 0.19
CNTF-201ENST00000361987 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
CNTF-201ENST00000361987 ARXQ96QS3 562 aa16.24■□□□□ 0.19
CNTF-201ENST00000361987 MYH14Q7Z406 1995 aaKnown RBP16.23■□□□□ 0.19
CNTF-201ENST00000361987 VAMP4O75379 141 aa16.23■□□□□ 0.19
CNTF-201ENST00000361987 NBPF26B4DH59 902 aa16.22■□□□□ 0.19
CNTF-201ENST00000361987 NBPF10Q6P3W6 841 aaKnown RBP16.22■□□□□ 0.19
CNTF-201ENST00000361987 NBPF15Q8N660 670 aa16.22■□□□□ 0.19
CNTF-201ENST00000361987 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
CNTF-201ENST00000361987 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
CNTF-201ENST00000361987 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
CNTF-201ENST00000361987 SSFA2P28290 1259 aa16.22■□□□□ 0.19
CNTF-201ENST00000361987 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
CNTF-201ENST00000361987 CCDC30Q5VVM6 783 aa16.22■□□□□ 0.19
CNTF-201ENST00000361987 CHMP4AQ9BY43 222 aa16.22■□□□□ 0.19
CNTF-201ENST00000361987 CHPF2Q9P2E5 772 aa16.22■□□□□ 0.19
CNTF-201ENST00000361987 PNPLA7Q6ZV29 1317 aa16.21■□□□□ 0.19
CNTF-201ENST00000361987 ANXA1P04083 346 aa16.21■□□□□ 0.19
CNTF-201ENST00000361987 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
CNTF-201ENST00000361987 FLAD1Q8NFF5 587 aa16.21■□□□□ 0.19
CNTF-201ENST00000361987 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
CNTF-201ENST00000361987 PDGFDQ9GZP0 370 aaPredicted RBP16.21■□□□□ 0.19
CNTF-201ENST00000361987 CICQ96RK0 1608 aaPredicted RBP16.21■□□□□ 0.19
CNTF-201ENST00000361987 RFC4P35249 363 aa16.2■□□□□ 0.18
CNTF-201ENST00000361987 EIF5P55010 431 aaKnown RBP16.2■□□□□ 0.18
CNTF-201ENST00000361987 PDIA6Q15084 440 aa16.2■□□□□ 0.18
CNTF-201ENST00000361987 DBF4Q9UBU7 674 aaPredicted RBP16.2■□□□□ 0.18
CNTF-201ENST00000361987 PROSER3Q2NL68 480 aa16.2■□□□□ 0.18
CNTF-201ENST00000361987 ADRA2BP18089 450 aa16.19■□□□□ 0.18
CNTF-201ENST00000361987 STK31Q9BXU1 1019 aa16.19■□□□□ 0.18
CNTF-201ENST00000361987 DDX21Q9NR30 783 aaKnown RBP eCLIP16.19■□□□□ 0.18
CNTF-201ENST00000361987 TBC1D2BQ9UPU7 963 aa16.19■□□□□ 0.18
CNTF-201ENST00000361987 ERBB4Q15303 1308 aa16.19■□□□□ 0.18
CNTF-201ENST00000361987 COL15A1P39059 1388 aa16.18■□□□□ 0.18
CNTF-201ENST00000361987 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
CNTF-201ENST00000361987 A0A087WZG4 1122 aa16.18■□□□□ 0.18
CNTF-201ENST00000361987 ZPR1O75312 459 aa16.18■□□□□ 0.18
CNTF-201ENST00000361987 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
CNTF-201ENST00000361987 AIMP1Q12904 312 aaKnown RBP16.18■□□□□ 0.18
CNTF-201ENST00000361987 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
CNTF-201ENST00000361987 HYPKQ9NX55 129 aa16.17■□□□□ 0.18
CNTF-201ENST00000361987 UBR3Q6ZT12 1888 aa16.17■□□□□ 0.18
CNTF-201ENST00000361987 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
CNTF-201ENST00000361987 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
CNTF-201ENST00000361987 LRP10Q7Z4F1 713 aa16.16■□□□□ 0.18
CNTF-201ENST00000361987 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
CNTF-201ENST00000361987 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
CNTF-201ENST00000361987 XAGE3Q8WTP9 111 aa16.15■□□□□ 0.18
CNTF-201ENST00000361987 PHAXQ9H814 394 aaKnown RBP16.15■□□□□ 0.18
CNTF-201ENST00000361987 NARFQ9UHQ1 456 aa16.15■□□□□ 0.18
CNTF-201ENST00000361987 ZBTB7AO95365 584 aa16.14■□□□□ 0.17
CNTF-201ENST00000361987 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
CNTF-201ENST00000361987 KIF6Q6ZMV9 814 aa16.14■□□□□ 0.17
CNTF-201ENST00000361987 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
CNTF-201ENST00000361987 TUBGCP6Q96RT7 1819 aa16.14■□□□□ 0.17
CNTF-201ENST00000361987 MSL1Q68DK7 614 aa16.14■□□□□ 0.17
CNTF-201ENST00000361987 BCL2L13Q9BXK5 485 aa16.14■□□□□ 0.17
CNTF-201ENST00000361987 SLC16A10Q8TF71 515 aa16.13■□□□□ 0.17
CNTF-201ENST00000361987 SSH1Q8WYL5 1049 aa16.13■□□□□ 0.17
CNTF-201ENST00000361987 USP42Q9H9J4 1324 aaKnown RBP16.13■□□□□ 0.17
CNTF-201ENST00000361987 GYS1P13807 737 aa16.12■□□□□ 0.17
CNTF-201ENST00000361987 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
CNTF-201ENST00000361987 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
CNTF-201ENST00000361987 CAMTA2O94983 1202 aa16.12■□□□□ 0.17
CNTF-201ENST00000361987 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
CNTF-201ENST00000361987 G2E3Q7L622 706 aa16.12■□□□□ 0.17
CNTF-201ENST00000361987 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms