RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
COL11A2-202ENST00000361917 TOP1P11387 765 aaKnown RBP17.27■□□□□ 0.36
COL11A2-202ENST00000361917 PDIA4P13667 645 aaKnown RBP17.27■□□□□ 0.36
COL11A2-202ENST00000361917 CPLX3Q8WVH0 158 aa17.27■□□□□ 0.36
COL11A2-202ENST00000361917 CRACR2AQ9BSW2 395 aa17.27■□□□□ 0.36
COL11A2-202ENST00000361917 GOPCQ9HD26 462 aa17.27■□□□□ 0.36
COL11A2-202ENST00000361917 GOLGA8AA7E2F4 631 aa17.27■□□□□ 0.36
COL11A2-202ENST00000361917 GOLGA8BA8MQT2 603 aa17.27■□□□□ 0.36
COL11A2-202ENST00000361917 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.36
COL11A2-202ENST00000361917 CLIP2Q9UDT6 1046 aa17.27■□□□□ 0.36
COL11A2-202ENST00000361917 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
COL11A2-202ENST00000361917 KIF5CO60282 957 aa17.27■□□□□ 0.35
COL11A2-202ENST00000361917 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.35
COL11A2-202ENST00000361917 ZSCAN12O43309 604 aa17.27■□□□□ 0.35
COL11A2-202ENST00000361917 LIG1P18858 919 aa17.27■□□□□ 0.35
COL11A2-202ENST00000361917 NLRP5P59047 1200 aa17.27■□□□□ 0.35
COL11A2-202ENST00000361917 ALDH1L2Q3SY69 923 aa17.27■□□□□ 0.35
COL11A2-202ENST00000361917 DYDC1Q8WWB3 177 aa17.27■□□□□ 0.35
COL11A2-202ENST00000361917 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
COL11A2-202ENST00000361917 TMCO3Q6UWJ1 677 aa17.26■□□□□ 0.35
COL11A2-202ENST00000361917 CCDC144CPQ8IYA2 1237 aa17.26■□□□□ 0.35
COL11A2-202ENST00000361917 SSFA2P28290 1259 aa17.26■□□□□ 0.35
COL11A2-202ENST00000361917 NUP88Q99567 741 aaPredicted RBP17.26■□□□□ 0.35
COL11A2-202ENST00000361917 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL11A2-202ENST00000361917 EMILIN1Q9Y6C2 1016 aa17.26■□□□□ 0.35
COL11A2-202ENST00000361917 CETN2P41208 172 aa17.26■□□□□ 0.35
COL11A2-202ENST00000361917 SH2B1Q9NRF2 756 aaPredicted RBP17.26■□□□□ 0.35
COL11A2-202ENST00000361917 IFIT3O14879 490 aaKnown RBP17.25■□□□□ 0.35
COL11A2-202ENST00000361917 URI1O94763 535 aaPredicted RBP17.25■□□□□ 0.35
COL11A2-202ENST00000361917 ANAPC15P60006 121 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 DNAAF4Q8WXU2 420 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 CUL5Q93034 780 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 SCAND2PQ9GZW5 306 aaPredicted RBP17.25■□□□□ 0.35
COL11A2-202ENST00000361917 SNAPC4Q5SXM2 1469 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
COL11A2-202ENST00000361917 SLC4A8Q2Y0W8 1093 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 TNNT1P13805 278 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 KIF4BQ2VIQ3 1234 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 CTNNBL1Q8WYA6 563 aaPredicted RBP17.25■□□□□ 0.35
COL11A2-202ENST00000361917 GPTP24298 496 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 TMEM266Q2M3C6 531 aa17.25■□□□□ 0.35
COL11A2-202ENST00000361917 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
COL11A2-202ENST00000361917 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
COL11A2-202ENST00000361917 HMGB1P09429 215 aaKnown RBP17.24■□□□□ 0.35
COL11A2-202ENST00000361917 MAP2K1Q02750 393 aaPredicted RBP17.24■□□□□ 0.35
COL11A2-202ENST00000361917 ZSCAN30Q86W11 494 aa17.24■□□□□ 0.35
COL11A2-202ENST00000361917 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
COL11A2-202ENST00000361917 TIAM1Q13009 1591 aa17.24■□□□□ 0.35
COL11A2-202ENST00000361917 ADAMTS2O95450 1211 aa17.24■□□□□ 0.35
COL11A2-202ENST00000361917 RPGRQ92834 1020 aaKnown RBP17.24■□□□□ 0.35
COL11A2-202ENST00000361917 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
COL11A2-202ENST00000361917 CCDC91Q7Z6B0 441 aa17.23■□□□□ 0.35
COL11A2-202ENST00000361917 LUZP1Q86V48 1076 aa17.23■□□□□ 0.35
COL11A2-202ENST00000361917 CDK13Q14004 1512 aaKnown RBP17.23■□□□□ 0.35
COL11A2-202ENST00000361917 CCDC194A0A1B0GVG4 234 aa17.23■□□□□ 0.35
COL11A2-202ENST00000361917 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
COL11A2-202ENST00000361917 WDR78Q5VTH9 848 aa17.23■□□□□ 0.35
COL11A2-202ENST00000361917 TRMT1Q9NXH9 659 aaKnown RBP17.23■□□□□ 0.35
COL11A2-202ENST00000361917 TRMT1LQ7Z2T5 733 aaKnown RBP17.23■□□□□ 0.35
COL11A2-202ENST00000361917 NESP48681 1621 aa17.23■□□□□ 0.35
COL11A2-202ENST00000361917 TDRD12Q587J7 1177 aaKnown RBP17.23■□□□□ 0.35
COL11A2-202ENST00000361917 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
COL11A2-202ENST00000361917 BCCIPQ9P287 314 aaKnown RBP eCLIP17.23■□□□□ 0.35
COL11A2-202ENST00000361917 LIMCH1Q9UPQ0 1083 aa17.23■□□□□ 0.35
COL11A2-202ENST00000361917 FSIP1Q8NA03 581 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 GBP3Q9H0R5 595 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 A0A087WZG4 1122 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 BIN1O00499 593 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
COL11A2-202ENST00000361917 VPS36Q86VN1 386 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 MACROD2A1Z1Q3 448 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 GJB2P29033 226 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 CATIPQ7Z7H3 387 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 MAP3K2Q9Y2U5 619 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
COL11A2-202ENST00000361917 PPFIA3O75145 1194 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 RAB34Q9BZG1 259 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 GDPD2Q9HCC8 539 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
COL11A2-202ENST00000361917 TTLL12Q14166 644 aaPredicted RBP17.22■□□□□ 0.35
COL11A2-202ENST00000361917 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.35
COL11A2-202ENST00000361917 GOLIM4O00461 696 aa17.21■□□□□ 0.35
COL11A2-202ENST00000361917 IFFO1Q0D2I5 559 aa17.21■□□□□ 0.35
COL11A2-202ENST00000361917 GSTTP1A0A1W2PQM5 241 aa17.21■□□□□ 0.35
COL11A2-202ENST00000361917 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
COL11A2-202ENST00000361917 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.35
COL11A2-202ENST00000361917 KIF18AQ8NI77 898 aa17.21■□□□□ 0.35
COL11A2-202ENST00000361917 VAT1LQ9HCJ6 419 aa17.21■□□□□ 0.35
COL11A2-202ENST00000361917 SHTN1A0MZ66 631 aa17.2■□□□□ 0.34
COL11A2-202ENST00000361917 FGFR1OPO95684 399 aaKnown RBP17.2■□□□□ 0.34
COL11A2-202ENST00000361917 RNF41Q9H4P4 317 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-202ENST00000361917 USP25Q9UHP3 1055 aa17.2■□□□□ 0.34
COL11A2-202ENST00000361917 KIF2AO00139 706 aaPredicted RBP17.2■□□□□ 0.34
COL11A2-202ENST00000361917 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
COL11A2-202ENST00000361917 PRDM10Q9NQV6 1147 aa17.2■□□□□ 0.34
COL11A2-202ENST00000361917 GOLGA6L10A0A0M3HER8 536 aa17.2■□□□□ 0.34
COL11A2-202ENST00000361917 SPTY2D1Q68D10 685 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms