RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CCDC87Q9NVE4 849 aa17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 ERBB4Q15303 1308 aa17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 C4BP0C0L5 1744 aa17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 TJP1Q07157 1748 aa17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 ADRA2BP18089 450 aa17.88■□□□□ 0.45
NSMCE1-201ENST00000361439 DUSP27Q5VZP5 1158 aa17.88■□□□□ 0.45
NSMCE1-201ENST00000361439 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
NSMCE1-201ENST00000361439 RPS6KA4O75676 772 aa17.87■□□□□ 0.45
NSMCE1-201ENST00000361439 SSFA2P28290 1259 aa17.87■□□□□ 0.45
NSMCE1-201ENST00000361439 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
NSMCE1-201ENST00000361439 CT47B1P0C2W7 299 aaPredicted RBP17.86■□□□□ 0.45
NSMCE1-201ENST00000361439 ZNF827Q17R98 1081 aa17.86■□□□□ 0.45
NSMCE1-201ENST00000361439 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
NSMCE1-201ENST00000361439 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
NSMCE1-201ENST00000361439 RTCBQ9Y3I0 505 aaKnown RBP17.86■□□□□ 0.45
NSMCE1-201ENST00000361439 PRAMEF22A3QJZ6 481 aa17.85■□□□□ 0.45
NSMCE1-201ENST00000361439 GNPATO15228 680 aa17.85■□□□□ 0.45
NSMCE1-201ENST00000361439 IL6STP40189 918 aaPredicted RBP17.85■□□□□ 0.45
NSMCE1-201ENST00000361439 TWISTNBQ3B726 338 aaPredicted RBP17.85■□□□□ 0.45
NSMCE1-201ENST00000361439 C8orf58Q8NAV2 365 aa17.85■□□□□ 0.45
NSMCE1-201ENST00000361439 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
NSMCE1-201ENST00000361439 LAMB4A4D0S4 1761 aa17.84■□□□□ 0.45
NSMCE1-201ENST00000361439 EXOSC9Q06265 439 aaKnown RBP17.84■□□□□ 0.45
NSMCE1-201ENST00000361439 KRT24Q2M2I5 525 aa17.84■□□□□ 0.45
NSMCE1-201ENST00000361439 CDCA7LQ96GN5 454 aa17.84■□□□□ 0.45
NSMCE1-201ENST00000361439 HDGFL1Q5TGJ6 251 aa17.83■□□□□ 0.44
NSMCE1-201ENST00000361439 CCDC30Q5VVM6 783 aa17.83■□□□□ 0.44
NSMCE1-201ENST00000361439 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
NSMCE1-201ENST00000361439 ZBTB1Q9Y2K1 713 aa17.83■□□□□ 0.44
NSMCE1-201ENST00000361439 A0A087WZG4 1122 aa17.82■□□□□ 0.44
NSMCE1-201ENST00000361439 A1BGP04217 495 aa17.82■□□□□ 0.44
NSMCE1-201ENST00000361439 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
NSMCE1-201ENST00000361439 EIF5P55010 431 aaKnown RBP17.82■□□□□ 0.44
NSMCE1-201ENST00000361439 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
NSMCE1-201ENST00000361439 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
NSMCE1-201ENST00000361439 DBF4Q9UBU7 674 aaPredicted RBP17.82■□□□□ 0.44
NSMCE1-201ENST00000361439 QSER1Q2KHR3 1735 aa17.81■□□□□ 0.44
NSMCE1-201ENST00000361439 MYH14Q7Z406 1995 aaKnown RBP17.81■□□□□ 0.44
NSMCE1-201ENST00000361439 VAMP4O75379 141 aa17.81■□□□□ 0.44
NSMCE1-201ENST00000361439 SLC16A10Q8TF71 515 aa17.81■□□□□ 0.44
NSMCE1-201ENST00000361439 PNPLA7Q6ZV29 1317 aa17.8■□□□□ 0.44
NSMCE1-201ENST00000361439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.8■□□□□ 0.44
NSMCE1-201ENST00000361439 ELL2O00472 640 aaPredicted RBP17.8■□□□□ 0.44
NSMCE1-201ENST00000361439 RGL2O15211 777 aa17.8■□□□□ 0.44
NSMCE1-201ENST00000361439 CANXP27824 592 aaKnown RBP17.8■□□□□ 0.44
NSMCE1-201ENST00000361439 DDX21Q9NR30 783 aaKnown RBP eCLIP17.8■□□□□ 0.44
NSMCE1-201ENST00000361439 UBR3Q6ZT12 1888 aa17.8■□□□□ 0.44
NSMCE1-201ENST00000361439 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
NSMCE1-201ENST00000361439 R3HDM1Q15032 1099 aaKnown RBP17.79■□□□□ 0.44
NSMCE1-201ENST00000361439 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
NSMCE1-201ENST00000361439 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
NSMCE1-201ENST00000361439 HYPKQ9NX55 129 aa17.79■□□□□ 0.44
NSMCE1-201ENST00000361439 COL15A1P39059 1388 aa17.79■□□□□ 0.44
NSMCE1-201ENST00000361439 RFC4P35249 363 aa17.78■□□□□ 0.44
NSMCE1-201ENST00000361439 PDIA6Q15084 440 aa17.78■□□□□ 0.44
NSMCE1-201ENST00000361439 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
NSMCE1-201ENST00000361439 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
NSMCE1-201ENST00000361439 COL23A1Q86Y22 540 aaPredicted RBP17.77■□□□□ 0.44
NSMCE1-201ENST00000361439 CHPF2Q9P2E5 772 aa17.77■□□□□ 0.44
NSMCE1-201ENST00000361439 PHF14O94880 888 aa17.76■□□□□ 0.43
NSMCE1-201ENST00000361439 LRP10Q7Z4F1 713 aa17.76■□□□□ 0.43
NSMCE1-201ENST00000361439 AMIGO3Q86WK7 504 aa17.76■□□□□ 0.43
NSMCE1-201ENST00000361439 NARFQ9UHQ1 456 aa17.76■□□□□ 0.43
NSMCE1-201ENST00000361439 ZPR1O75312 459 aa17.75■□□□□ 0.43
NSMCE1-201ENST00000361439 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
NSMCE1-201ENST00000361439 USP42Q9H9J4 1324 aaKnown RBP17.74■□□□□ 0.43
NSMCE1-201ENST00000361439 ERVV-1B6SEH8 477 aa17.74■□□□□ 0.43
NSMCE1-201ENST00000361439 NECTIN2Q92692 538 aa17.74■□□□□ 0.43
NSMCE1-201ENST00000361439 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
NSMCE1-201ENST00000361439 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
NSMCE1-201ENST00000361439 MSH5O43196 834 aa17.73■□□□□ 0.43
NSMCE1-201ENST00000361439 MYL6BP14649 208 aa17.73■□□□□ 0.43
NSMCE1-201ENST00000361439 PROSER3Q2NL68 480 aa17.73■□□□□ 0.43
NSMCE1-201ENST00000361439 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
NSMCE1-201ENST00000361439 DZIP3Q86Y13 1208 aaKnown RBP17.73■□□□□ 0.43
NSMCE1-201ENST00000361439 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 KIF6Q6ZMV9 814 aa17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 NLGN1Q8N2Q7 840 aa17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 MTFR1LQ9H019 292 aa17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 ZNF652Q9Y2D9 606 aa17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 ZNF330Q9Y3S2 320 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-201ENST00000361439 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
NSMCE1-201ENST00000361439 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
NSMCE1-201ENST00000361439 CACNA1FO60840 1977 aa17.71■□□□□ 0.43
NSMCE1-201ENST00000361439 MAP3K15Q6ZN16 1313 aa17.71■□□□□ 0.42
NSMCE1-201ENST00000361439 CAMTA2O94983 1202 aa17.7■□□□□ 0.42
NSMCE1-201ENST00000361439 DDX58O95786 925 aaKnown RBP17.7■□□□□ 0.42
NSMCE1-201ENST00000361439 GYS1P13807 737 aa17.7■□□□□ 0.42
NSMCE1-201ENST00000361439 XAGE3Q8WTP9 111 aa17.7■□□□□ 0.42
NSMCE1-201ENST00000361439 TBC1D2BQ9UPU7 963 aa17.7■□□□□ 0.42
NSMCE1-201ENST00000361439 ANXA1P04083 346 aa17.69■□□□□ 0.42
NSMCE1-201ENST00000361439 USPL1Q5W0Q7 1092 aa17.69■□□□□ 0.42
NSMCE1-201ENST00000361439 ANKRD13DQ6ZTN6 518 aa17.69■□□□□ 0.42
NSMCE1-201ENST00000361439 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
NSMCE1-201ENST00000361439 PLBD2Q8NHP8 589 aa17.69■□□□□ 0.42
NSMCE1-201ENST00000361439 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms