RNA–Protein interactions for RNA: ENST00000360027.4

SH2D1A-201, Transcript of SH2 domain containing 1A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH2D1A, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1A-201ENST00000360027 TTC5Q8N0Z6 440 aa13.41□□□□□ -0.26
SH2D1A-201ENST00000360027 C4BP0C0L5 1744 aa13.41□□□□□ -0.26
SH2D1A-201ENST00000360027 C5P01031 1676 aa13.4□□□□□ -0.26
SH2D1A-201ENST00000360027 CRKLP46109 303 aaKnown RBP13.4□□□□□ -0.26
SH2D1A-201ENST00000360027 NLGN1Q8N2Q7 840 aa13.4□□□□□ -0.26
SH2D1A-201ENST00000360027 PRKRIP1Q9H875 184 aaPredicted RBP13.4□□□□□ -0.26
SH2D1A-201ENST00000360027 CD2APQ9Y5K6 639 aa13.4□□□□□ -0.26
SH2D1A-201ENST00000360027 STARD3NLO95772 234 aa13.39□□□□□ -0.27
SH2D1A-201ENST00000360027 SLC39A6Q13433 755 aa13.39□□□□□ -0.27
SH2D1A-201ENST00000360027 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
SH2D1A-201ENST00000360027 CICQ96RK0 1608 aaPredicted RBP13.39□□□□□ -0.27
SH2D1A-201ENST00000360027 PHF14O94880 888 aa13.38□□□□□ -0.27
SH2D1A-201ENST00000360027 CYP19A1P11511 503 aaPredicted RBP13.38□□□□□ -0.27
SH2D1A-201ENST00000360027 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
SH2D1A-201ENST00000360027 PNISRQ8TF01 805 aaKnown RBP13.38□□□□□ -0.27
SH2D1A-201ENST00000360027 FMNL2Q96PY5 1086 aa13.38□□□□□ -0.27
SH2D1A-201ENST00000360027 CCDC87Q9NVE4 849 aa13.38□□□□□ -0.27
SH2D1A-201ENST00000360027 COL24A1Q17RW2 1714 aa13.38□□□□□ -0.27
SH2D1A-201ENST00000360027 BTBD11A6QL63 1104 aa13.37□□□□□ -0.27
SH2D1A-201ENST00000360027 RFC4P35249 363 aa13.37□□□□□ -0.27
SH2D1A-201ENST00000360027 NFE2L2Q16236 605 aa13.37□□□□□ -0.27
SH2D1A-201ENST00000360027 DNAJC10Q8IXB1 793 aa13.37□□□□□ -0.27
SH2D1A-201ENST00000360027 HEG1Q9ULI3 1381 aa13.36□□□□□ -0.27
SH2D1A-201ENST00000360027 SCN11AQ9UI33 1791 aa13.36□□□□□ -0.27
SH2D1A-201ENST00000360027 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
SH2D1A-201ENST00000360027 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
SH2D1A-201ENST00000360027 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
SH2D1A-201ENST00000360027 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
SH2D1A-201ENST00000360027 SOS1Q07889 1333 aaPredicted RBP13.36□□□□□ -0.27
SH2D1A-201ENST00000360027 MAPK8IP3Q9UPT6 1336 aa13.36□□□□□ -0.27
SH2D1A-201ENST00000360027 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
SH2D1A-201ENST00000360027 GYS1P13807 737 aa13.35□□□□□ -0.27
SH2D1A-201ENST00000360027 UTRNP46939 3433 aa13.35□□□□□ -0.27
SH2D1A-201ENST00000360027 USP42Q9H9J4 1324 aaKnown RBP13.35□□□□□ -0.27
SH2D1A-201ENST00000360027 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
SH2D1A-201ENST00000360027 A0A087WZG4 1122 aa13.34□□□□□ -0.27
SH2D1A-201ENST00000360027 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
SH2D1A-201ENST00000360027 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
SH2D1A-201ENST00000360027 MCM10Q7L590 875 aa13.34□□□□□ -0.27
SH2D1A-201ENST00000360027 RGL2O15211 777 aa13.33□□□□□ -0.28
SH2D1A-201ENST00000360027 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.28
SH2D1A-201ENST00000360027 EIF5P55010 431 aaKnown RBP13.33□□□□□ -0.28
SH2D1A-201ENST00000360027 NARFQ9UHQ1 456 aa13.33□□□□□ -0.28
SH2D1A-201ENST00000360027 ZPR1O75312 459 aa13.32□□□□□ -0.28
SH2D1A-201ENST00000360027 MMP10P09238 476 aa13.32□□□□□ -0.28
SH2D1A-201ENST00000360027 IL6STP40189 918 aaPredicted RBP13.32□□□□□ -0.28
SH2D1A-201ENST00000360027 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
SH2D1A-201ENST00000360027 SMIM5Q71RC9 77 aa13.32□□□□□ -0.28
SH2D1A-201ENST00000360027 ZBTB1Q9Y2K1 713 aa13.32□□□□□ -0.28
SH2D1A-201ENST00000360027 UBR3Q6ZT12 1888 aa13.31□□□□□ -0.28
SH2D1A-201ENST00000360027 GRIN3BO60391 1043 aa13.31□□□□□ -0.28
SH2D1A-201ENST00000360027 TGFB2P61812 414 aa13.31□□□□□ -0.28
SH2D1A-201ENST00000360027 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
SH2D1A-201ENST00000360027 TUBGCP6Q96RT7 1819 aa13.3□□□□□ -0.28
SH2D1A-201ENST00000360027 TM4SF1P30408 202 aa13.3□□□□□ -0.28
SH2D1A-201ENST00000360027 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
SH2D1A-201ENST00000360027 RIPK4P57078 832 aa13.3□□□□□ -0.28
SH2D1A-201ENST00000360027 DCTN1Q14203 1278 aa13.3□□□□□ -0.28
SH2D1A-201ENST00000360027 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
SH2D1A-201ENST00000360027 COL15A1P39059 1388 aa13.3□□□□□ -0.28
SH2D1A-201ENST00000360027 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
SH2D1A-201ENST00000360027 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
SH2D1A-201ENST00000360027 KCNQ3O43525 872 aa13.29□□□□□ -0.28
SH2D1A-201ENST00000360027 NLGN2Q8NFZ4 835 aa13.29□□□□□ -0.28
SH2D1A-201ENST00000360027 ADAMTS8Q9UP79 889 aa13.29□□□□□ -0.28
SH2D1A-201ENST00000360027 FKBP8Q14318 412 aa13.28□□□□□ -0.28
SH2D1A-201ENST00000360027 NPM2Q86SE8 214 aaKnown RBP13.28□□□□□ -0.28
SH2D1A-201ENST00000360027 TJP1Q07157 1748 aa13.27□□□□□ -0.28
SH2D1A-201ENST00000360027 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
SH2D1A-201ENST00000360027 GPR162Q16538 588 aa13.27□□□□□ -0.29
SH2D1A-201ENST00000360027 USPL1Q5W0Q7 1092 aa13.27□□□□□ -0.29
SH2D1A-201ENST00000360027 CLEC4GQ6UXB4 293 aa13.27□□□□□ -0.29
SH2D1A-201ENST00000360027 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
SH2D1A-201ENST00000360027 USP16Q9Y5T5 823 aa13.27□□□□□ -0.29
SH2D1A-201ENST00000360027 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.29
SH2D1A-201ENST00000360027 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
SH2D1A-201ENST00000360027 GIGYF1O75420 1035 aaPredicted RBP13.26□□□□□ -0.29
SH2D1A-201ENST00000360027 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
SH2D1A-201ENST00000360027 ERBB4Q15303 1308 aa13.26□□□□□ -0.29
SH2D1A-201ENST00000360027 C10orf71Q711Q0 1435 aa13.26□□□□□ -0.29
SH2D1A-201ENST00000360027 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
SH2D1A-201ENST00000360027 ANP32CO43423 234 aa13.25□□□□□ -0.29
SH2D1A-201ENST00000360027 A1BGP04217 495 aa13.25□□□□□ -0.29
SH2D1A-201ENST00000360027 BCL2L12Q9HB09 334 aa13.25□□□□□ -0.29
SH2D1A-201ENST00000360027 MYH14Q7Z406 1995 aaKnown RBP13.24□□□□□ -0.29
SH2D1A-201ENST00000360027 CHL1O00533 1208 aa13.24□□□□□ -0.29
SH2D1A-201ENST00000360027 YY1P25490 414 aa13.24□□□□□ -0.29
SH2D1A-201ENST00000360027 DDR1Q08345 913 aa13.24□□□□□ -0.29
SH2D1A-201ENST00000360027 NFIXQ14938 502 aa13.24□□□□□ -0.29
SH2D1A-201ENST00000360027 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
SH2D1A-201ENST00000360027 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
SH2D1A-201ENST00000360027 CAMTA2O94983 1202 aa13.23□□□□□ -0.29
SH2D1A-201ENST00000360027 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
SH2D1A-201ENST00000360027 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
SH2D1A-201ENST00000360027 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
SH2D1A-201ENST00000360027 HOXB7P09629 217 aa13.22□□□□□ -0.29
SH2D1A-201ENST00000360027 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
SH2D1A-201ENST00000360027 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
SH2D1A-201ENST00000360027 THUMPD2Q9BTF0 503 aaKnown RBP13.22□□□□□ -0.29
SH2D1A-201ENST00000360027 MIS18AQ9NYP9 233 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms