RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 KIF2AO00139 706 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-202ENST00000358392 TCERG1LQ5VWI1 586 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 ADCY5O95622 1261 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-202ENST00000358392 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 TMEM57Q8N5G2 664 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 ZNF830Q96NB3 372 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-202ENST00000358392 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
COL11A1-202ENST00000358392 RAB11FIP4Q86YS3 637 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 FSD2A1L4K1 749 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 FERP16591 822 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 TXNDC2Q86VQ3 553 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 CRACR2BQ8N4Y2 399 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-202ENST00000358392 ARL1P40616 181 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-202ENST00000358392 SNW1Q13573 536 aaKnown RBP12.93□□□□□ -0.34
COL11A1-202ENST00000358392 WDR70Q9NW82 654 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 ANKRD18BA2A2Z9 1011 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 ALS2CR12Q96Q35 445 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
COL11A1-202ENST00000358392 PRC1O43663 620 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 CFAP70Q5T0N1 1121 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 CEP135Q66GS9 1140 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 FSIP1Q8NA03 581 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 DNAAF4Q8WXU2 420 aa12.93□□□□□ -0.34
COL11A1-202ENST00000358392 TFIP11Q9UBB9 837 aaKnown RBP12.93□□□□□ -0.34
COL11A1-202ENST00000358392 IGHMBP2P38935 993 aaKnown RBP12.92□□□□□ -0.34
COL11A1-202ENST00000358392 FBF1Q8TES7 1133 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 HSF2BPO75031 334 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 HSP90AA4PQ58FG1 418 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 SSRP1Q08945 709 aaKnown RBP12.92□□□□□ -0.34
COL11A1-202ENST00000358392 NLRP5P59047 1200 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 NACADO15069 1562 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 C6orf163Q5TEZ5 329 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
COL11A1-202ENST00000358392 CCDC12Q8WUD4 166 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-202ENST00000358392 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
COL11A1-202ENST00000358392 CEP112Q8N8E3 955 aa12.91□□□□□ -0.34
COL11A1-202ENST00000358392 NAA15Q9BXJ9 866 aaKnown RBP12.91□□□□□ -0.34
COL11A1-202ENST00000358392 CIZ1Q9ULV3 898 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-202ENST00000358392 CCDC6Q16204 474 aa12.91□□□□□ -0.34
COL11A1-202ENST00000358392 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
COL11A1-202ENST00000358392 RSPH14Q9UHP6 348 aa12.91□□□□□ -0.34
COL11A1-202ENST00000358392 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
COL11A1-202ENST00000358392 SLC12A7Q9Y666 1083 aa12.91□□□□□ -0.34
COL11A1-202ENST00000358392 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-202ENST00000358392 WIZO95785 1651 aa12.91□□□□□ -0.34
COL11A1-202ENST00000358392 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
COL11A1-202ENST00000358392 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 TSNARE1Q96NA8 513 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 DNAI2Q9GZS0 605 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 NAPBQ9H115 298 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
COL11A1-202ENST00000358392 MRPS9P82933 396 aaKnown RBP12.9□□□□□ -0.34
COL11A1-202ENST00000358392 DAAM2Q86T65 1068 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 ZNF354CQ86Y25 554 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 TIGD1Q96MW7 591 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
COL11A1-202ENST00000358392 HYPKQ9NX55 129 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 CABP1Q9NZU7 370 aa12.9□□□□□ -0.34
COL11A1-202ENST00000358392 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 TNPO1Q92973 898 aaKnown RBP12.89□□□□□ -0.35
COL11A1-202ENST00000358392 IKBKGQ9Y6K9 419 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 ANKIB1Q9P2G1 1089 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 CFAP57Q96MR6 1250 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 MX1P20591 662 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 CA8P35219 290 aa12.89□□□□□ -0.35
COL11A1-202ENST00000358392 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-202ENST00000358392 TMEM110-MUSTN1A8MSY1 372 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 GJB2P29033 226 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 PSMC4P43686 418 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 GNG11P61952 73 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 MYD88Q99836 296 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 ZWINTO95229 277 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 DZIP1Q86YF9 867 aaKnown RBP12.88□□□□□ -0.35
COL11A1-202ENST00000358392 CUL5Q93034 780 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
COL11A1-202ENST00000358392 PABPN1LA6NDY0 278 aaKnown RBP12.88□□□□□ -0.35
COL11A1-202ENST00000358392 IFIT1P09914 478 aaKnown RBP12.88□□□□□ -0.35
COL11A1-202ENST00000358392 HSPA4P34932 840 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 GOLGA8AA7E2F4 631 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 STX1AQ16623 288 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 SMIM23A6NLE4 172 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 IDEP14735 1019 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
COL11A1-202ENST00000358392 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-202ENST00000358392 GJC1P36383 396 aa12.87□□□□□ -0.35
COL11A1-202ENST00000358392 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
COL11A1-202ENST00000358392 MCM6Q14566 821 aa12.87□□□□□ -0.35
COL11A1-202ENST00000358392 TMCO4Q5TGY1 634 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms