RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 LAMB4A4D0S4 1761 aa17.91■□□□□ 0.46
SHANK2-202ENST00000357171 STARD3NLO95772 234 aa17.91■□□□□ 0.46
SHANK2-202ENST00000357171 GYS1P13807 737 aa17.91■□□□□ 0.46
SHANK2-202ENST00000357171 CCDC146Q8IYE0 955 aa17.91■□□□□ 0.46
SHANK2-202ENST00000357171 PNISRQ8TF01 805 aaKnown RBP17.91■□□□□ 0.46
SHANK2-202ENST00000357171 ZBTB1Q9Y2K1 713 aa17.91■□□□□ 0.46
SHANK2-202ENST00000357171 USP42Q9H9J4 1324 aaKnown RBP17.9■□□□□ 0.46
SHANK2-202ENST00000357171 RFC4P35249 363 aa17.9■□□□□ 0.46
SHANK2-202ENST00000357171 NLGN1Q8N2Q7 840 aa17.9■□□□□ 0.46
SHANK2-202ENST00000357171 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
SHANK2-202ENST00000357171 ANP32CO43423 234 aa17.89■□□□□ 0.45
SHANK2-202ENST00000357171 EIF5P55010 431 aaKnown RBP17.89■□□□□ 0.45
SHANK2-202ENST00000357171 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
SHANK2-202ENST00000357171 BABAM1Q9NWV8 329 aa17.89■□□□□ 0.45
SHANK2-202ENST00000357171 TRIM35Q9UPQ4 493 aa17.89■□□□□ 0.45
SHANK2-202ENST00000357171 MIS18AQ9NYP9 233 aa17.88■□□□□ 0.45
SHANK2-202ENST00000357171 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
SHANK2-202ENST00000357171 COL15A1P39059 1388 aa17.88■□□□□ 0.45
SHANK2-202ENST00000357171 SNRPA1P09661 255 aaKnown RBP17.87■□□□□ 0.45
SHANK2-202ENST00000357171 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
SHANK2-202ENST00000357171 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
SHANK2-202ENST00000357171 EIF4A1P60842 406 aaKnown RBP17.86■□□□□ 0.45
SHANK2-202ENST00000357171 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
SHANK2-202ENST00000357171 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
SHANK2-202ENST00000357171 CD2APQ9Y5K6 639 aa17.86■□□□□ 0.45
SHANK2-202ENST00000357171 SCN7AQ01118 1682 aa17.86■□□□□ 0.45
SHANK2-202ENST00000357171 MMP10P09238 476 aa17.85■□□□□ 0.45
SHANK2-202ENST00000357171 SRP68Q9UHB9 627 aaKnown RBP17.85■□□□□ 0.45
SHANK2-202ENST00000357171 KIAA1551Q9HCM1 1747 aa17.85■□□□□ 0.45
SHANK2-202ENST00000357171 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
SHANK2-202ENST00000357171 GIGYF1O75420 1035 aaPredicted RBP17.84■□□□□ 0.45
SHANK2-202ENST00000357171 A1BGP04217 495 aa17.84■□□□□ 0.45
SHANK2-202ENST00000357171 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
SHANK2-202ENST00000357171 FKBP8Q14318 412 aa17.84■□□□□ 0.45
SHANK2-202ENST00000357171 NRXN2Q9P2S2 1712 aa17.84■□□□□ 0.45
SHANK2-202ENST00000357171 AFDNP55196 1824 aaKnown RBP17.83■□□□□ 0.45
SHANK2-202ENST00000357171 TM4SF1P30408 202 aa17.83■□□□□ 0.45
SHANK2-202ENST00000357171 NLGN2Q8NFZ4 835 aa17.83■□□□□ 0.45
SHANK2-202ENST00000357171 BCL2L12Q9HB09 334 aa17.83■□□□□ 0.45
SHANK2-202ENST00000357171 A0A087WZG4 1122 aa17.82■□□□□ 0.44
SHANK2-202ENST00000357171 CHL1O00533 1208 aa17.82■□□□□ 0.44
SHANK2-202ENST00000357171 APAF1O14727 1248 aa17.82■□□□□ 0.44
SHANK2-202ENST00000357171 NEUROD2Q15784 382 aa17.82■□□□□ 0.44
SHANK2-202ENST00000357171 ZPR1O75312 459 aa17.81■□□□□ 0.44
SHANK2-202ENST00000357171 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
SHANK2-202ENST00000357171 C10orf71Q711Q0 1435 aa17.8■□□□□ 0.44
SHANK2-202ENST00000357171 NBPF26B4DH59 902 aa17.8■□□□□ 0.44
SHANK2-202ENST00000357171 NBPF10Q6P3W6 841 aaKnown RBP17.8■□□□□ 0.44
SHANK2-202ENST00000357171 NBPF15Q8N660 670 aa17.8■□□□□ 0.44
SHANK2-202ENST00000357171 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
SHANK2-202ENST00000357171 TSPYL4Q9UJ04 414 aa17.8■□□□□ 0.44
SHANK2-202ENST00000357171 BRCA1P38398 1863 aaKnown RBP17.8■□□□□ 0.44
SHANK2-202ENST00000357171 CHD4Q14839 1912 aa17.8■□□□□ 0.44
SHANK2-202ENST00000357171 DDR1Q08345 913 aa17.79■□□□□ 0.44
SHANK2-202ENST00000357171 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
SHANK2-202ENST00000357171 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
SHANK2-202ENST00000357171 N4BP2Q86UW6 1770 aaPredicted RBP17.78■□□□□ 0.44
SHANK2-202ENST00000357171 RGL2O15211 777 aa17.78■□□□□ 0.44
SHANK2-202ENST00000357171 ZNF853P0CG23 659 aa17.78■□□□□ 0.44
SHANK2-202ENST00000357171 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
SHANK2-202ENST00000357171 PARP3Q9Y6F1 533 aa17.78■□□□□ 0.44
SHANK2-202ENST00000357171 CAMTA2O94983 1202 aa17.77■□□□□ 0.43
SHANK2-202ENST00000357171 NFIXQ14938 502 aa17.77■□□□□ 0.43
SHANK2-202ENST00000357171 CFAP44Q96MT7 982 aa17.77■□□□□ 0.43
SHANK2-202ENST00000357171 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
SHANK2-202ENST00000357171 PIP4K2AP48426 406 aaPredicted RBP17.76■□□□□ 0.43
SHANK2-202ENST00000357171 CCDC27Q2M243 656 aa17.76■□□□□ 0.43
SHANK2-202ENST00000357171 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
SHANK2-202ENST00000357171 NUP98P52948 1817 aa17.76■□□□□ 0.43
SHANK2-202ENST00000357171 ERBB4Q15303 1308 aa17.76■□□□□ 0.43
SHANK2-202ENST00000357171 PXDNLA1KZ92 1463 aa17.75■□□□□ 0.43
SHANK2-202ENST00000357171 TGFB2P61812 414 aa17.75■□□□□ 0.43
SHANK2-202ENST00000357171 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
SHANK2-202ENST00000357171 LRP10Q7Z4F1 713 aa17.74■□□□□ 0.43
SHANK2-202ENST00000357171 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
SHANK2-202ENST00000357171 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
SHANK2-202ENST00000357171 ZNF330Q9Y3S2 320 aaPredicted RBP17.73■□□□□ 0.43
SHANK2-202ENST00000357171 ANKRD31Q8N7Z5 1873 aa17.72■□□□□ 0.43
SHANK2-202ENST00000357171 DLEC1Q9Y238 1755 aa17.72■□□□□ 0.43
SHANK2-202ENST00000357171 YBX3P16989 372 aaKnown RBP eCLIP17.72■□□□□ 0.431e-6■■■□□ 16.3
SHANK2-202ENST00000357171 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
SHANK2-202ENST00000357171 PDIA6Q15084 440 aa17.72■□□□□ 0.43
SHANK2-202ENST00000357171 TBC1D9BQ66K14 1250 aa17.72■□□□□ 0.43
SHANK2-202ENST00000357171 HOXB7P09629 217 aa17.71■□□□□ 0.43
SHANK2-202ENST00000357171 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
SHANK2-202ENST00000357171 MBIPQ9NS73 344 aa17.71■□□□□ 0.43
SHANK2-202ENST00000357171 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
SHANK2-202ENST00000357171 SERPINB2P05120 415 aa17.7■□□□□ 0.42
SHANK2-202ENST00000357171 GNAI1P63096 354 aa17.7■□□□□ 0.42
SHANK2-202ENST00000357171 GPR162Q16538 588 aa17.7■□□□□ 0.42
SHANK2-202ENST00000357171 KRT24Q2M2I5 525 aa17.7■□□□□ 0.42
SHANK2-202ENST00000357171 WWC1Q8IX03 1113 aa17.7■□□□□ 0.42
SHANK2-202ENST00000357171 CARMIL3Q8ND23 1372 aa17.7■□□□□ 0.42
SHANK2-202ENST00000357171 KCNA3P22001 575 aa17.69■□□□□ 0.42
SHANK2-202ENST00000357171 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
SHANK2-202ENST00000357171 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
SHANK2-202ENST00000357171 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
SHANK2-202ENST00000357171 GRIN3BO60391 1043 aa17.67■□□□□ 0.42
SHANK2-202ENST00000357171 DPEP1P16444 411 aa17.67■□□□□ 0.42
SHANK2-202ENST00000357171 SETDB2Q96T68 719 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms