RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 PROSER3Q2NL68 480 aa14.67□□□□□ -0.06
SIRPA-201ENST00000356025 MYD88Q99836 296 aa14.67□□□□□ -0.06
SIRPA-201ENST00000356025 ZKSCAN1P17029 563 aaPredicted RBP14.67□□□□□ -0.06
SIRPA-201ENST00000356025 PRIM1P49642 420 aaKnown RBP14.67□□□□□ -0.06
SIRPA-201ENST00000356025 STRN4Q9NRL3 753 aa14.67□□□□□ -0.06
SIRPA-201ENST00000356025 ATP7BP35670 1465 aa14.66□□□□□ -0.06
SIRPA-201ENST00000356025 DDX58O95786 925 aaKnown RBP14.66□□□□□ -0.06
SIRPA-201ENST00000356025 GORABQ5T7V8 394 aa14.66□□□□□ -0.06
SIRPA-201ENST00000356025 TBX22Q9Y458 520 aa14.66□□□□□ -0.06
SIRPA-201ENST00000356025 ARHGEF28Q8N1W1 1705 aaKnown RBP14.66□□□□□ -0.06
SIRPA-201ENST00000356025 AATKQ6ZMQ8 1374 aa14.66□□□□□ -0.06
SIRPA-201ENST00000356025 GCP02774 474 aa14.66□□□□□ -0.06
SIRPA-201ENST00000356025 ZSCAN23Q3MJ62 389 aa14.66□□□□□ -0.06
SIRPA-201ENST00000356025 MYO5BQ9ULV0 1848 aa14.65□□□□□ -0.06
SIRPA-201ENST00000356025 COL3A1P02461 1466 aaPredicted RBP14.65□□□□□ -0.06
SIRPA-201ENST00000356025 USP6P35125 1406 aa14.65□□□□□ -0.06
SIRPA-201ENST00000356025 PKNOX2Q96KN3 472 aa14.65□□□□□ -0.06
SIRPA-201ENST00000356025 BRPF1P55201 1214 aaPredicted RBP14.65□□□□□ -0.06
SIRPA-201ENST00000356025 CWC22Q9HCG8 908 aaKnown RBP14.65□□□□□ -0.06
SIRPA-201ENST00000356025 SBNO1A3KN83 1393 aa14.65□□□□□ -0.06
SIRPA-201ENST00000356025 SOS1Q07889 1333 aaPredicted RBP14.65□□□□□ -0.06
SIRPA-201ENST00000356025 KAT6BQ8WYB5 2073 aa14.65□□□□□ -0.06
SIRPA-201ENST00000356025 ATF3P18847 181 aa14.65□□□□□ -0.06
SIRPA-201ENST00000356025 NFATC2IPQ8NCF5 419 aa14.65□□□□□ -0.06
SIRPA-201ENST00000356025 SYTL4Q96C24 671 aaPredicted RBP14.65□□□□□ -0.06
SIRPA-201ENST00000356025 RUFY2Q8WXA3 655 aa14.64□□□□□ -0.07
SIRPA-201ENST00000356025 EDC3Q96F86 508 aaKnown RBP14.64□□□□□ -0.07
SIRPA-201ENST00000356025 R3HCC1Q9Y3T6 440 aaKnown RBP14.64□□□□□ -0.07
SIRPA-201ENST00000356025 MAP3K5Q99683 1374 aa14.64□□□□□ -0.07
SIRPA-201ENST00000356025 KRT28Q7Z3Y7 464 aa14.64□□□□□ -0.07
SIRPA-201ENST00000356025 DRC7Q8IY82 874 aa14.64□□□□□ -0.07
SIRPA-201ENST00000356025 CPSF1Q10570 1443 aaKnown RBP14.64□□□□□ -0.07
SIRPA-201ENST00000356025 FAM177BA6PVY3 158 aa14.64□□□□□ -0.07
SIRPA-201ENST00000356025 DBF4Q9UBU7 674 aaPredicted RBP14.64□□□□□ -0.07
SIRPA-201ENST00000356025 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
SIRPA-201ENST00000356025 PTCH1Q13635 1447 aa14.63□□□□□ -0.07
SIRPA-201ENST00000356025 MAP2P11137 1827 aaKnown RBP14.63□□□□□ -0.07
SIRPA-201ENST00000356025 CLCN1P35523 988 aa14.63□□□□□ -0.07
SIRPA-201ENST00000356025 KLHL40Q2TBA0 621 aa14.63□□□□□ -0.07
SIRPA-201ENST00000356025 HSP90AB4PQ58FF6 505 aa14.63□□□□□ -0.07
SIRPA-201ENST00000356025 SYAP1Q96A49 352 aaPredicted RBP14.63□□□□□ -0.07
SIRPA-201ENST00000356025 LRRC2Q9BYS8 371 aa14.63□□□□□ -0.07
SIRPA-201ENST00000356025 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
SIRPA-201ENST00000356025 ZMYND15Q9H091 742 aa14.62□□□□□ -0.07
SIRPA-201ENST00000356025 NSFL1CQ9UNZ2 370 aaKnown RBP14.62□□□□□ -0.07
SIRPA-201ENST00000356025 CDK12Q9NYV4 1490 aaPredicted RBP14.62□□□□□ -0.07
SIRPA-201ENST00000356025 TAF7LQ5H9L4 462 aa14.62□□□□□ -0.07
SIRPA-201ENST00000356025 COPS6Q7L5N1 327 aa14.62□□□□□ -0.07
SIRPA-201ENST00000356025 UBE3BQ7Z3V4 1068 aa14.62□□□□□ -0.07
SIRPA-201ENST00000356025 PDRG1Q9NUG6 133 aa14.62□□□□□ -0.07
SIRPA-201ENST00000356025 FAM173BQ6P4H8 233 aa14.62□□□□□ -0.07
SIRPA-201ENST00000356025 CNPY2Q9Y2B0 182 aa14.61□□□□□ -0.07
SIRPA-201ENST00000356025 CLTCQ00610 1675 aaKnown RBP14.61□□□□□ -0.07
SIRPA-201ENST00000356025 EIF4A1P60842 406 aaKnown RBP14.61□□□□□ -0.07
SIRPA-201ENST00000356025 CAMK4Q16566 473 aa14.61□□□□□ -0.07
SIRPA-201ENST00000356025 XAGE3Q8WTP9 111 aa14.61□□□□□ -0.07
SIRPA-201ENST00000356025 RBSNQ9H1K0 784 aa14.61□□□□□ -0.07
SIRPA-201ENST00000356025 TATP17735 454 aaPredicted RBP14.61□□□□□ -0.07
SIRPA-201ENST00000356025 IP6K1Q92551 441 aa14.61□□□□□ -0.07
SIRPA-201ENST00000356025 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
SIRPA-201ENST00000356025 GADD45BO75293 160 aaPredicted RBP14.6□□□□□ -0.07
SIRPA-201ENST00000356025 KCNH5Q8NCM2 988 aa14.6□□□□□ -0.07
SIRPA-201ENST00000356025 IL25Q9H293 177 aa14.6□□□□□ -0.07
SIRPA-201ENST00000356025 TFIP11Q9UBB9 837 aaKnown RBP14.6□□□□□ -0.07
SIRPA-201ENST00000356025 SPC24Q8NBT2 197 aa14.6□□□□□ -0.07
SIRPA-201ENST00000356025 CYP46A1Q9Y6A2 500 aa14.6□□□□□ -0.07
SIRPA-201ENST00000356025 TMEM131LA2VDJ0 1609 aa14.6□□□□□ -0.07
SIRPA-201ENST00000356025 IGSF1Q8N6C5 1336 aa14.6□□□□□ -0.07
SIRPA-201ENST00000356025 GLRX3O76003 335 aaKnown RBP14.6□□□□□ -0.07
SIRPA-201ENST00000356025 AK2P54819 239 aa14.6□□□□□ -0.07
SIRPA-201ENST00000356025 CABP4P57796 275 aa14.6□□□□□ -0.07
SIRPA-201ENST00000356025 ERBB4Q15303 1308 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 FAM227BQ96M60 508 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 LMBRD1Q9NUN5 540 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 KIAA0232Q92628 1395 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 H3BQV1 296 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 RAB11FIP3O75154 756 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 IFFO2Q5TF58 517 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 ZBTB3Q9H5J0 574 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 ECHDC1Q9NTX5 307 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 EVA1CP58658 441 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 RASEFQ8IZ41 740 aa14.59□□□□□ -0.07
SIRPA-201ENST00000356025 BICC1Q9H694 974 aaKnown RBP14.59□□□□□ -0.07
SIRPA-201ENST00000356025 LARP1BQ659C4 914 aaKnown RBP14.58□□□□□ -0.07
SIRPA-201ENST00000356025 USP48Q86UV5 1035 aa14.58□□□□□ -0.07
SIRPA-201ENST00000356025 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.07
SIRPA-201ENST00000356025 PREX1Q8TCU6 1659 aa14.58□□□□□ -0.08
SIRPA-201ENST00000356025 RNMTO43148 476 aaKnown RBP14.58□□□□□ -0.08
SIRPA-201ENST00000356025 MCM2P49736 904 aa14.58□□□□□ -0.08
SIRPA-201ENST00000356025 CCDC173Q0VFZ6 552 aa14.58□□□□□ -0.08
SIRPA-201ENST00000356025 TOM1L2Q6ZVM7 507 aa14.58□□□□□ -0.08
SIRPA-201ENST00000356025 TMEM63CQ9P1W3 806 aa14.58□□□□□ -0.08
SIRPA-201ENST00000356025 DDX46Q7L014 1031 aaKnown RBP14.58□□□□□ -0.08
SIRPA-201ENST00000356025 CHMP4AQ9BY43 222 aa14.58□□□□□ -0.08
SIRPA-201ENST00000356025 RAB11FIP4Q86YS3 637 aa14.57□□□□□ -0.08
SIRPA-201ENST00000356025 FAM184AQ8NB25 1140 aa14.57□□□□□ -0.08
SIRPA-201ENST00000356025 TSPY26PQ9H489 355 aa14.57□□□□□ -0.08
SIRPA-201ENST00000356025 SNRKQ9NRH2 765 aa14.57□□□□□ -0.08
SIRPA-201ENST00000356025 WDR33Q9C0J8 1336 aaKnown RBP14.57□□□□□ -0.08
SIRPA-201ENST00000356025 A0A087WZG4 1122 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms