RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LMTK3Q96Q04 1460 aa27.24■■□□□ 1.95
NKX2-1-201ENST00000354822 HDAC5Q9UQL6 1122 aa27.24■■□□□ 1.95
NKX2-1-201ENST00000354822 RGPD5Q99666 1765 aa27.24■■□□□ 1.95
NKX2-1-201ENST00000354822 NUCB2P80303 420 aa27.24■■□□□ 1.95
NKX2-1-201ENST00000354822 HSP90AB4PQ58FF6 505 aa27.24■■□□□ 1.95
NKX2-1-201ENST00000354822 FSD2A1L4K1 749 aa27.23■■□□□ 1.95
NKX2-1-201ENST00000354822 MCCP23508 829 aa27.23■■□□□ 1.95
NKX2-1-201ENST00000354822 AXIN2Q9Y2T1 843 aa27.23■■□□□ 1.95
NKX2-1-201ENST00000354822 TRIM6-TRIM34B2RNG4 842 aa27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 EPB41L2O43491 1005 aaKnown RBP27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 SURF6O75683 361 aaKnown RBP27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 NPHP3Q7Z494 1330 aa27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 TUBGCP6Q96RT7 1819 aa27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 CHMLP26374 656 aa27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 KIF1BPQ96EK5 621 aa27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 ISY1Q9ULR0 285 aaKnown RBP27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 HEG1Q9ULI3 1381 aa27.22■■□□□ 1.95
NKX2-1-201ENST00000354822 GOLGA6L22H0YM25 854 aa27.21■■□□□ 1.95
NKX2-1-201ENST00000354822 GIGYF1O75420 1035 aaPredicted RBP27.21■■□□□ 1.95
NKX2-1-201ENST00000354822 SRGAP3O43295 1099 aa27.21■■□□□ 1.95
NKX2-1-201ENST00000354822 RILPL2Q969X0 211 aa27.21■■□□□ 1.95
NKX2-1-201ENST00000354822 ALDH1L1O75891 902 aa27.2■■□□□ 1.94
NKX2-1-201ENST00000354822 NBPF7P0C2Y1 421 aaPredicted RBP27.2■■□□□ 1.94
NKX2-1-201ENST00000354822 ANAPC15P60006 121 aa27.2■■□□□ 1.94
NKX2-1-201ENST00000354822 TSHZ3Q63HK5 1081 aa27.2■■□□□ 1.94
NKX2-1-201ENST00000354822 GZF1Q9H116 711 aaPredicted RBP27.2■■□□□ 1.94
NKX2-1-201ENST00000354822 MCM2P49736 904 aa27.19■■□□□ 1.94
NKX2-1-201ENST00000354822 RHPN1Q8TCX5 695 aa27.19■■□□□ 1.94
NKX2-1-201ENST00000354822 PXDNQ92626 1479 aa27.19■■□□□ 1.94
NKX2-1-201ENST00000354822 DDX17Q92841 729 aaKnown RBP27.19■■□□□ 1.94
NKX2-1-201ENST00000354822 XIRP1Q702N8 1843 aaKnown RBP27.19■■□□□ 1.94
NKX2-1-201ENST00000354822 ADCY9O60503 1353 aa27.18■■□□□ 1.94
NKX2-1-201ENST00000354822 ZC3H6P61129 1189 aaKnown RBP27.18■■□□□ 1.94
NKX2-1-201ENST00000354822 HYPKQ9NX55 129 aa27.18■■□□□ 1.94
NKX2-1-201ENST00000354822 TNS3Q68CZ2 1445 aa27.17■■□□□ 1.94
NKX2-1-201ENST00000354822 ERBB3P21860 1342 aa27.17■■□□□ 1.94
NKX2-1-201ENST00000354822 KSR2Q6VAB6 950 aa27.17■■□□□ 1.94
NKX2-1-201ENST00000354822 MTX1Q13505 466 aa27.16■■□□□ 1.94
NKX2-1-201ENST00000354822 IL1RAPL2Q9NP60 686 aa27.16■■□□□ 1.94
NKX2-1-201ENST00000354822 SSFA2P28290 1259 aa27.16■■□□□ 1.94
NKX2-1-201ENST00000354822 IL17RAQ96F46 866 aa27.15■■□□□ 1.94
NKX2-1-201ENST00000354822 COL18A1P39060 1754 aa27.14■■□□□ 1.94
NKX2-1-201ENST00000354822 STRCQ7RTU9 1775 aa27.14■■□□□ 1.93
NKX2-1-201ENST00000354822 ANXA1P04083 346 aa27.14■■□□□ 1.93
NKX2-1-201ENST00000354822 MAP3K2Q9Y2U5 619 aa27.14■■□□□ 1.93
NKX2-1-201ENST00000354822 RAPGEF4Q8WZA2 1011 aa27.13■■□□□ 1.93
NKX2-1-201ENST00000354822 C9orf78Q9NZ63 289 aaPredicted RBP27.13■■□□□ 1.93
NKX2-1-201ENST00000354822 ADAMTS7Q9UKP4 1686 aa27.13■■□□□ 1.93
NKX2-1-201ENST00000354822 DDX58O95786 925 aaKnown RBP27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 MRE11P49959 708 aa27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 NUTM1Q86Y26 1132 aa27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 ANO2Q9NQ90 1003 aa27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 BAG4O95429 457 aaKnown RBP27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 CYP2E1P05181 493 aaPredicted RBP27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 NEK4P51957 841 aa27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 ABCC6O95255 1503 aa27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 SPATA31A3Q5VYP0 1347 aa27.12■■□□□ 1.93
NKX2-1-201ENST00000354822 SIPA1L3O60292 1781 aaPredicted RBP27.11■■□□□ 1.93
NKX2-1-201ENST00000354822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.11■■□□□ 1.93
NKX2-1-201ENST00000354822 CRYBG1Q9Y4K1 1723 aa27.11■■□□□ 1.93
NKX2-1-201ENST00000354822 XRCC6P12956 609 aaKnown RBP eCLIP27.11■■□□□ 1.93
NKX2-1-201ENST00000354822 PI4K2BQ8TCG2 481 aa27.11■■□□□ 1.93
NKX2-1-201ENST00000354822 DDX21Q9NR30 783 aaKnown RBP eCLIP27.11■■□□□ 1.93
NKX2-1-201ENST00000354822 PLEKHG2Q9H7P9 1386 aa27.1■■□□□ 1.93
NKX2-1-201ENST00000354822 UNC5CLQ8IV45 518 aa27.1■■□□□ 1.93
NKX2-1-201ENST00000354822 USP42Q9H9J4 1324 aaKnown RBP27.1■■□□□ 1.93
NKX2-1-201ENST00000354822 TTC41PQ6P2S7 1318 aa27.09■■□□□ 1.93
NKX2-1-201ENST00000354822 CNTROBQ8N137 903 aa27.09■■□□□ 1.93
NKX2-1-201ENST00000354822 LINS1Q8NG48 757 aa27.09■■□□□ 1.93
NKX2-1-201ENST00000354822 SPG7Q9UQ90 795 aa27.09■■□□□ 1.93
NKX2-1-201ENST00000354822 KDM4FA0A1W2PPD8 638 aa27.08■■□□□ 1.93
NKX2-1-201ENST00000354822 TATP17735 454 aaPredicted RBP27.08■■□□□ 1.93
NKX2-1-201ENST00000354822 ERC1Q8IUD2 1116 aa27.08■■□□□ 1.93
NKX2-1-201ENST00000354822 PROSER3Q2NL68 480 aa27.08■■□□□ 1.93
NKX2-1-201ENST00000354822 OS9Q13438 667 aaPredicted RBP27.07■■□□□ 1.92
NKX2-1-201ENST00000354822 NLRP2Q9NX02 1062 aa27.07■■□□□ 1.92
NKX2-1-201ENST00000354822 ZNF790Q6PG37 636 aa27.06■■□□□ 1.92
NKX2-1-201ENST00000354822 CLASRPQ8N2M8 674 aaKnown RBP27.06■■□□□ 1.92
NKX2-1-201ENST00000354822 CABLES1Q8TDN4 633 aa27.06■■□□□ 1.92
NKX2-1-201ENST00000354822 SLC52A2Q9HAB3 445 aa27.06■■□□□ 1.92
NKX2-1-201ENST00000354822 UTYO14607 1347 aa27.05■■□□□ 1.92
NKX2-1-201ENST00000354822 GLRX3O76003 335 aaKnown RBP27.05■■□□□ 1.92
NKX2-1-201ENST00000354822 KLHL40Q2TBA0 621 aa27.05■■□□□ 1.92
NKX2-1-201ENST00000354822 BRINP3Q76B58 766 aa27.05■■□□□ 1.92
NKX2-1-201ENST00000354822 TMX3Q96JJ7 454 aa27.05■■□□□ 1.92
NKX2-1-201ENST00000354822 RTN4Q9NQC3 1192 aaKnown RBP27.05■■□□□ 1.92
NKX2-1-201ENST00000354822 CPDO75976 1380 aa27.04■■□□□ 1.92
NKX2-1-201ENST00000354822 FAM43AQ8N2R8 423 aa27.04■■□□□ 1.92
NKX2-1-201ENST00000354822 ZGPATQ8N5A5 531 aaKnown RBP27.04■■□□□ 1.92
NKX2-1-201ENST00000354822 PRAMEF22A3QJZ6 481 aa27.03■■□□□ 1.92
NKX2-1-201ENST00000354822 GRM8O00222 908 aa27.03■■□□□ 1.92
NKX2-1-201ENST00000354822 PHKG2P15735 406 aa27.03■■□□□ 1.92
NKX2-1-201ENST00000354822 HSPA4P34932 840 aa27.03■■□□□ 1.92
NKX2-1-201ENST00000354822 CUL4AQ13619 759 aa27.03■■□□□ 1.92
NKX2-1-201ENST00000354822 INTS4Q96HW7 963 aaKnown RBP27.03■■□□□ 1.92
NKX2-1-201ENST00000354822 PALD1Q9ULE6 856 aa27.03■■□□□ 1.92
NKX2-1-201ENST00000354822 SGSM2O43147 1006 aa27.02■■□□□ 1.92
NKX2-1-201ENST00000354822 IFNL2Q8IZJ0 200 aa27.02■■□□□ 1.92
NKX2-1-201ENST00000354822 GPATCH3Q96I76 525 aa27.02■■□□□ 1.92
NKX2-1-201ENST00000354822 GRPEL1Q9HAV7 217 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms