RNA–Protein interactions for RNA: ENST00000346855.7

UBE2E1-202, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3 BASIC

Gene UBE2E1, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-202ENST00000346855 TWISTNBQ3B726 338 aaPredicted RBP23.65■■□□□ 1.38
UBE2E1-202ENST00000346855 LINC00116Q8NCU8 138 aa23.65■■□□□ 1.38
UBE2E1-202ENST00000346855 TEX13AQ9BXU3 409 aaPredicted RBP23.65■■□□□ 1.38
UBE2E1-202ENST00000346855 USP16Q9Y5T5 823 aa23.65■■□□□ 1.38
UBE2E1-202ENST00000346855 ELL2O00472 640 aaPredicted RBP23.64■■□□□ 1.37
UBE2E1-202ENST00000346855 CYP19A1P11511 503 aaPredicted RBP23.63■■□□□ 1.37
UBE2E1-202ENST00000346855 QSER1Q2KHR3 1735 aa23.62■■□□□ 1.37
UBE2E1-202ENST00000346855 VAMP4O75379 141 aa23.62■■□□□ 1.37
UBE2E1-202ENST00000346855 CNTNAP4Q9C0A0 1308 aa23.61■■□□□ 1.37
UBE2E1-202ENST00000346855 STARD3NLO95772 234 aa23.6■■□□□ 1.37
UBE2E1-202ENST00000346855 CT47B1P0C2W7 299 aaPredicted RBP23.6■■□□□ 1.37
UBE2E1-202ENST00000346855 HDGFL1Q5TGJ6 251 aa23.6■■□□□ 1.37
UBE2E1-202ENST00000346855 EIF2S2P20042 333 aaKnown RBP23.59■■□□□ 1.37
UBE2E1-202ENST00000346855 HMGB2P26583 209 aaKnown RBP23.59■■□□□ 1.37
UBE2E1-202ENST00000346855 CRKLP46109 303 aaKnown RBP23.59■■□□□ 1.37
UBE2E1-202ENST00000346855 ERBB4Q15303 1308 aa23.58■■□□□ 1.37
UBE2E1-202ENST00000346855 C4AP0C0L4 1744 aa23.58■■□□□ 1.36
UBE2E1-202ENST00000346855 RC3H1Q5TC82 1133 aaKnown RBP23.57■■□□□ 1.36
UBE2E1-202ENST00000346855 CCDC87Q9NVE4 849 aa23.57■■□□□ 1.36
UBE2E1-202ENST00000346855 ZBTB1Q9Y2K1 713 aa23.57■■□□□ 1.36
UBE2E1-202ENST00000346855 A1BGP04217 495 aa23.56■■□□□ 1.36
UBE2E1-202ENST00000346855 INTS5Q6P9B9 1019 aaKnown RBP23.56■■□□□ 1.36
UBE2E1-202ENST00000346855 NECTIN2Q92692 538 aa23.56■■□□□ 1.36
UBE2E1-202ENST00000346855 CHMP4AQ9BY43 222 aa23.55■■□□□ 1.36
UBE2E1-202ENST00000346855 ZNF827Q17R98 1081 aa23.54■■□□□ 1.36
UBE2E1-202ENST00000346855 CCDC30Q5VVM6 783 aa23.54■■□□□ 1.36
UBE2E1-202ENST00000346855 AKT1S1Q96B36 256 aa23.54■■□□□ 1.36
UBE2E1-202ENST00000346855 ZNF428Q96B54 188 aa23.54■■□□□ 1.36
UBE2E1-202ENST00000346855 ANO8Q9HCE9 1232 aaPredicted RBP23.54■■□□□ 1.36
UBE2E1-202ENST00000346855 NBPF26B4DH59 902 aa23.53■■□□□ 1.36
UBE2E1-202ENST00000346855 PDIA6Q15084 440 aa23.53■■□□□ 1.36
UBE2E1-202ENST00000346855 NBPF14Q5TI25 921 aa23.53■■□□□ 1.36
UBE2E1-202ENST00000346855 NBPF10Q6P3W6 841 aaKnown RBP23.53■■□□□ 1.36
UBE2E1-202ENST00000346855 NBPF15Q8N660 670 aa23.53■■□□□ 1.36
UBE2E1-202ENST00000346855 AK7Q96M32 723 aa23.53■■□□□ 1.36
UBE2E1-202ENST00000346855 CHPF2Q9P2E5 772 aa23.53■■□□□ 1.36
UBE2E1-202ENST00000346855 BCORQ6W2J9 1755 aa23.53■■□□□ 1.36
UBE2E1-202ENST00000346855 PIP4K2AP48426 406 aaPredicted RBP23.52■■□□□ 1.36
UBE2E1-202ENST00000346855 DDX21Q9NR30 783 aaKnown RBP eCLIP23.52■■□□□ 1.36
UBE2E1-202ENST00000346855 GNPATO15228 680 aa23.52■■□□□ 1.36
UBE2E1-202ENST00000346855 CANXP27824 592 aaKnown RBP23.52■■□□□ 1.36
UBE2E1-202ENST00000346855 PROSER3Q2NL68 480 aa23.52■■□□□ 1.36
UBE2E1-202ENST00000346855 DBF4Q9UBU7 674 aaPredicted RBP23.52■■□□□ 1.36
UBE2E1-202ENST00000346855 SCN7AQ01118 1682 aa23.51■■□□□ 1.35
UBE2E1-202ENST00000346855 SOCS7O14512 581 aa23.51■■□□□ 1.35
UBE2E1-202ENST00000346855 ANXA1P04083 346 aa23.51■■□□□ 1.35
UBE2E1-202ENST00000346855 LRP10Q7Z4F1 713 aa23.51■■□□□ 1.35
UBE2E1-202ENST00000346855 COL15A1P39059 1388 aa23.5■■□□□ 1.35
UBE2E1-202ENST00000346855 TCERG1O14776 1098 aaKnown RBP23.5■■□□□ 1.35
UBE2E1-202ENST00000346855 RPS6KA4O75676 772 aa23.5■■□□□ 1.35
UBE2E1-202ENST00000346855 IL6STP40189 918 aaPredicted RBP23.5■■□□□ 1.35
UBE2E1-202ENST00000346855 ALDH1L2Q3SY69 923 aa23.5■■□□□ 1.35
UBE2E1-202ENST00000346855 AMIGO3Q86WK7 504 aa23.5■■□□□ 1.35
UBE2E1-202ENST00000346855 STK31Q9BXU1 1019 aa23.5■■□□□ 1.35
UBE2E1-202ENST00000346855 RARSP54136 660 aaKnown RBP23.49■■□□□ 1.35
UBE2E1-202ENST00000346855 EIF5P55010 431 aaKnown RBP23.49■■□□□ 1.35
UBE2E1-202ENST00000346855 SLC15A2Q16348 729 aa23.49■■□□□ 1.35
UBE2E1-202ENST00000346855 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
UBE2E1-202ENST00000346855 STK32BQ9NY57 414 aa23.49■■□□□ 1.35
UBE2E1-202ENST00000346855 MYL6BP14649 208 aa23.48■■□□□ 1.35
UBE2E1-202ENST00000346855 RTCBQ9Y3I0 505 aaKnown RBP23.48■■□□□ 1.35
UBE2E1-202ENST00000346855 ARFGEF2Q9Y6D5 1785 aa23.47■■□□□ 1.35
UBE2E1-202ENST00000346855 HYPKQ9NX55 129 aa23.47■■□□□ 1.35
UBE2E1-202ENST00000346855 SSFA2P28290 1259 aa23.46■■□□□ 1.35
UBE2E1-202ENST00000346855 BCL2L13Q9BXK5 485 aa23.46■■□□□ 1.35
UBE2E1-202ENST00000346855 TFCP2L1Q9NZI6 479 aa23.46■■□□□ 1.35
UBE2E1-202ENST00000346855 CASZ1Q86V15 1759 aa23.45■■□□□ 1.34
UBE2E1-202ENST00000346855 NUP98P52948 1817 aa23.45■■□□□ 1.34
UBE2E1-202ENST00000346855 SLC4A2P04920 1241 aa23.45■■□□□ 1.34
UBE2E1-202ENST00000346855 ADRA2BP18089 450 aa23.45■■□□□ 1.34
UBE2E1-202ENST00000346855 SMIM5Q71RC9 77 aa23.45■■□□□ 1.34
UBE2E1-202ENST00000346855 MRPL50Q8N5N7 158 aaKnown RBP23.45■■□□□ 1.34
UBE2E1-202ENST00000346855 SMC4Q9NTJ3 1288 aa23.45■■□□□ 1.34
UBE2E1-202ENST00000346855 ZNF330Q9Y3S2 320 aaPredicted RBP23.45■■□□□ 1.34
UBE2E1-202ENST00000346855 PHAXQ9H814 394 aaKnown RBP23.44■■□□□ 1.34
UBE2E1-202ENST00000346855 ANKRD36CQ5JPF3 1778 aa23.44■■□□□ 1.34
UBE2E1-202ENST00000346855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.43■■□□□ 1.34
UBE2E1-202ENST00000346855 PHF14O94880 888 aa23.43■■□□□ 1.34
UBE2E1-202ENST00000346855 BRPF1P55201 1214 aaPredicted RBP23.43■■□□□ 1.34
UBE2E1-202ENST00000346855 RCAN3Q9UKA8 241 aa23.43■■□□□ 1.34
UBE2E1-202ENST00000346855 PNPLA7Q6ZV29 1317 aa23.43■■□□□ 1.34
UBE2E1-202ENST00000346855 G2E3Q7L622 706 aa23.42■■□□□ 1.34
UBE2E1-202ENST00000346855 XAGE3Q8WTP9 111 aa23.42■■□□□ 1.34
UBE2E1-202ENST00000346855 A0A087WZG4 1122 aa23.41■■□□□ 1.34
UBE2E1-202ENST00000346855 TRAPPC3LQ5T215 181 aa23.41■■□□□ 1.34
UBE2E1-202ENST00000346855 N4BP2Q86UW6 1770 aaPredicted RBP23.41■■□□□ 1.34
UBE2E1-202ENST00000346855 BCAR3O75815 825 aa23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 FLIIQ13045 1269 aa23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 TTLL7Q6ZT98 887 aa23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 COPS6Q7L5N1 327 aa23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 NPM2Q86SE8 214 aaKnown RBP23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 FLAD1Q8NFF5 587 aa23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 ARHGEF1Q92888 912 aaKnown RBP23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 AIMP1Q12904 312 aaKnown RBP23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 DZIP3Q86Y13 1208 aaKnown RBP23.4■■□□□ 1.34
UBE2E1-202ENST00000346855 KIF16BQ96L93 1317 aa23.39■■□□□ 1.33
UBE2E1-202ENST00000346855 COL23A1Q86Y22 540 aaPredicted RBP23.39■■□□□ 1.33
UBE2E1-202ENST00000346855 MAP3K15Q6ZN16 1313 aa23.38■■□□□ 1.33
UBE2E1-202ENST00000346855 USP42Q9H9J4 1324 aaKnown RBP23.38■■□□□ 1.33
UBE2E1-202ENST00000346855 NARFQ9UHQ1 456 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms