RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 COL15A1P39059 1388 aa26.24■■□□□ 1.79
CLTA-202ENST00000345519 TEX13AQ9BXU3 409 aaPredicted RBP26.24■■□□□ 1.79
CLTA-202ENST00000345519 GYS1P13807 737 aa26.23■■□□□ 1.79
CLTA-202ENST00000345519 ZBTB1Q9Y2K1 713 aa26.23■■□□□ 1.79
CLTA-202ENST00000345519 KCNQ3O43525 872 aa26.22■■□□□ 1.79
CLTA-202ENST00000345519 TAF7Q15545 349 aaPredicted RBP26.22■■□□□ 1.79
CLTA-202ENST00000345519 N4BP2Q86UW6 1770 aaPredicted RBP26.21■■□□□ 1.79
CLTA-202ENST00000345519 TMPOP42166 694 aaKnown RBP26.21■■□□□ 1.79
CLTA-202ENST00000345519 ADAMTS8Q9UP79 889 aa26.21■■□□□ 1.79
CLTA-202ENST00000345519 DLEC1Q9Y238 1755 aa26.2■■□□□ 1.79
CLTA-202ENST00000345519 STARD3NLO95772 234 aa26.2■■□□□ 1.78
CLTA-202ENST00000345519 RFC4P35249 363 aa26.2■■□□□ 1.78
CLTA-202ENST00000345519 WDR43Q15061 677 aaKnown RBP eCLIP26.2■■□□□ 1.78
CLTA-202ENST00000345519 NLGN1Q8N2Q7 840 aa26.2■■□□□ 1.78
CLTA-202ENST00000345519 RUNDC1Q96C34 613 aa26.2■■□□□ 1.78
CLTA-202ENST00000345519 CD2APQ9Y5K6 639 aa26.2■■□□□ 1.78
CLTA-202ENST00000345519 C10orf71Q711Q0 1435 aa26.2■■□□□ 1.78
CLTA-202ENST00000345519 EIF5P55010 431 aaKnown RBP26.18■■□□□ 1.78
CLTA-202ENST00000345519 PNISRQ8TF01 805 aaKnown RBP26.18■■□□□ 1.78
CLTA-202ENST00000345519 RIPK4P57078 832 aa26.16■■□□□ 1.78
CLTA-202ENST00000345519 LMOD3Q0VAK6 560 aa26.16■■□□□ 1.78
CLTA-202ENST00000345519 ARFGEF1Q9Y6D6 1849 aa26.16■■□□□ 1.78
CLTA-202ENST00000345519 MMP10P09238 476 aa26.15■■□□□ 1.78
CLTA-202ENST00000345519 NLGN2Q8NFZ4 835 aa26.15■■□□□ 1.78
CLTA-202ENST00000345519 BABAM1Q9NWV8 329 aa26.15■■□□□ 1.78
CLTA-202ENST00000345519 NARFQ9UHQ1 456 aa26.15■■□□□ 1.78
CLTA-202ENST00000345519 SNRPA1P09661 255 aaKnown RBP26.14■■□□□ 1.78
CLTA-202ENST00000345519 IL6STP40189 918 aaPredicted RBP26.14■■□□□ 1.78
CLTA-202ENST00000345519 THUMPD2Q9BTF0 503 aaKnown RBP26.14■■□□□ 1.78
CLTA-202ENST00000345519 NUP98P52948 1817 aa26.14■■□□□ 1.77
CLTA-202ENST00000345519 CCDC146Q8IYE0 955 aa26.13■■□□□ 1.77
CLTA-202ENST00000345519 SRP68Q9UHB9 627 aaKnown RBP26.13■■□□□ 1.77
CLTA-202ENST00000345519 ANKRD31Q8N7Z5 1873 aa26.13■■□□□ 1.77
CLTA-202ENST00000345519 TRIM35Q9UPQ4 493 aa26.12■■□□□ 1.77
CLTA-202ENST00000345519 PXDNLA1KZ92 1463 aa26.11■■□□□ 1.77
CLTA-202ENST00000345519 PRAMEF22A3QJZ6 481 aa26.11■■□□□ 1.77
CLTA-202ENST00000345519 FKBP8Q14318 412 aa26.11■■□□□ 1.77
CLTA-202ENST00000345519 CCDC184Q52MB2 194 aa26.11■■□□□ 1.77
CLTA-202ENST00000345519 USP16Q9Y5T5 823 aa26.11■■□□□ 1.77
CLTA-202ENST00000345519 TM4SF1P30408 202 aa26.1■■□□□ 1.77
CLTA-202ENST00000345519 EIF4A1P60842 406 aaKnown RBP26.1■■□□□ 1.77
CLTA-202ENST00000345519 BCL2L12Q9HB09 334 aa26.1■■□□□ 1.77
CLTA-202ENST00000345519 USPL1Q5W0Q7 1092 aa26.09■■□□□ 1.77
CLTA-202ENST00000345519 MIS18AQ9NYP9 233 aa26.09■■□□□ 1.77
CLTA-202ENST00000345519 A0A087WZG4 1122 aa26.08■■□□□ 1.77
CLTA-202ENST00000345519 ANP32CO43423 234 aa26.08■■□□□ 1.77
CLTA-202ENST00000345519 ZPR1O75312 459 aa26.08■■□□□ 1.77
CLTA-202ENST00000345519 GIGYF1O75420 1035 aaPredicted RBP26.08■■□□□ 1.77
CLTA-202ENST00000345519 CANXP27824 592 aaKnown RBP26.08■■□□□ 1.77
CLTA-202ENST00000345519 A1BGP04217 495 aa26.07■■□□□ 1.76
CLTA-202ENST00000345519 DDR1Q08345 913 aa26.07■■□□□ 1.76
CLTA-202ENST00000345519 ANKRD36CQ5JPF3 1778 aa26.06■■□□□ 1.76
CLTA-202ENST00000345519 POLRMTO00411 1230 aaKnown RBP26.06■■□□□ 1.76
CLTA-202ENST00000345519 DCAF8L1A6NGE4 600 aa26.05■■□□□ 1.76
CLTA-202ENST00000345519 RGL2O15211 777 aa26.05■■□□□ 1.76
CLTA-202ENST00000345519 KLHL34Q8N239 644 aa26.05■■□□□ 1.76
CLTA-202ENST00000345519 RRP7AQ9Y3A4 280 aaKnown RBP26.05■■□□□ 1.76
CLTA-202ENST00000345519 NBPF26B4DH59 902 aa26.04■■□□□ 1.76
CLTA-202ENST00000345519 NBPF10Q6P3W6 841 aaKnown RBP26.04■■□□□ 1.76
CLTA-202ENST00000345519 NBPF15Q8N660 670 aa26.04■■□□□ 1.76
CLTA-202ENST00000345519 PARP3Q9Y6F1 533 aa26.04■■□□□ 1.76
CLTA-202ENST00000345519 COL11A2P13942 1736 aaPredicted RBP26.04■■□□□ 1.76
CLTA-202ENST00000345519 ARFGEF2Q9Y6D5 1785 aa26.04■■□□□ 1.76
CLTA-202ENST00000345519 TSPYL4Q9UJ04 414 aa26.03■■□□□ 1.76
CLTA-202ENST00000345519 CHL1O00533 1208 aa26.02■■□□□ 1.76
CLTA-202ENST00000345519 CAMTA2O94983 1202 aa26.01■■□□□ 1.75
CLTA-202ENST00000345519 TGFB2P61812 414 aa26.01■■□□□ 1.75
CLTA-202ENST00000345519 NFIXQ14938 502 aa26.01■■□□□ 1.75
CLTA-202ENST00000345519 ERBB4Q15303 1308 aa26.01■■□□□ 1.75
CLTA-202ENST00000345519 NCBP3Q53F19 620 aaKnown RBP26.01■■□□□ 1.75
CLTA-202ENST00000345519 APAF1O14727 1248 aa26■■□□□ 1.75
CLTA-202ENST00000345519 YBX3P16989 372 aaKnown RBP eCLIP25.99■■□□□ 1.75
CLTA-202ENST00000345519 NEUROD2Q15784 382 aa25.99■■□□□ 1.75
CLTA-202ENST00000345519 ZNF853P0CG23 659 aa25.98■■□□□ 1.75
CLTA-202ENST00000345519 CARMIL3Q8ND23 1372 aa25.97■■□□□ 1.75
CLTA-202ENST00000345519 CLEC4GQ6UXB4 293 aa25.97■■□□□ 1.75
CLTA-202ENST00000345519 CFAP44Q96MT7 982 aa25.97■■□□□ 1.75
CLTA-202ENST00000345519 MRS2Q9HD23 443 aa25.97■■□□□ 1.75
CLTA-202ENST00000345519 TBC1D2BQ9UPU7 963 aa25.97■■□□□ 1.75
CLTA-202ENST00000345519 PIP4K2AP48426 406 aaPredicted RBP25.96■■□□□ 1.75
CLTA-202ENST00000345519 DZIP3Q86Y13 1208 aaKnown RBP25.96■■□□□ 1.75
CLTA-202ENST00000345519 GPR162Q16538 588 aa25.95■■□□□ 1.74
CLTA-202ENST00000345519 CCDC27Q2M243 656 aa25.95■■□□□ 1.74
CLTA-202ENST00000345519 LRP10Q7Z4F1 713 aa25.95■■□□□ 1.74
CLTA-202ENST00000345519 CACNA1SQ13698 1873 aa25.95■■□□□ 1.74
CLTA-202ENST00000345519 KCNA3P22001 575 aa25.94■■□□□ 1.74
CLTA-202ENST00000345519 TBC1D9BQ66K14 1250 aa25.94■■□□□ 1.74
CLTA-202ENST00000345519 CACNA1FO60840 1977 aa25.93■■□□□ 1.74
CLTA-202ENST00000345519 ATP10DQ9P241 1426 aa25.93■■□□□ 1.74
CLTA-202ENST00000345519 SBF1O95248 1867 aa25.93■■□□□ 1.74
CLTA-202ENST00000345519 GRIN3BO60391 1043 aa25.92■■□□□ 1.74
CLTA-202ENST00000345519 HOXB7P09629 217 aa25.92■■□□□ 1.74
CLTA-202ENST00000345519 IFT57Q9NWB7 429 aa25.92■■□□□ 1.74
CLTA-202ENST00000345519 ZNF330Q9Y3S2 320 aaPredicted RBP25.92■■□□□ 1.74
CLTA-202ENST00000345519 SERPINB2P05120 415 aa25.91■■□□□ 1.74
CLTA-202ENST00000345519 NPM2Q86SE8 214 aaKnown RBP25.91■■□□□ 1.74
CLTA-202ENST00000345519 CALD1Q05682 793 aaKnown RBP25.9■■□□□ 1.74
CLTA-202ENST00000345519 PDIA6Q15084 440 aa25.9■■□□□ 1.74
CLTA-202ENST00000345519 ERVV-1B6SEH8 477 aa25.89■■□□□ 1.74
CLTA-202ENST00000345519 TNRC6CQ9HCJ0 1690 aaKnown RBP25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms