RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0
LMX1A-202ENST00000342310 RAB11FIP4Q86YS3 637 aa15.08■□□□□ 0
LMX1A-202ENST00000342310 RASEFQ8IZ41 740 aa15.08■□□□□ 0
LMX1A-202ENST00000342310 PHF8Q9UPP1 1060 aa15.08■□□□□ 0
LMX1A-202ENST00000342310 PNPLA6Q8IY17 1366 aa15.08■□□□□ 0
LMX1A-202ENST00000342310 GPATCH3Q96I76 525 aa15.08■□□□□ 0
LMX1A-202ENST00000342310 ORAI2Q96SN7 254 aa15.08■□□□□ 0
LMX1A-202ENST00000342310 PTPRMP28827 1452 aa15.07■□□□□ 0
LMX1A-202ENST00000342310 AK2P54819 239 aa15.07■□□□□ 0
LMX1A-202ENST00000342310 GUCY1B3Q02153 619 aa15.07■□□□□ 0
LMX1A-202ENST00000342310 BICD2Q8TD16 824 aa15.07■□□□□ 0
LMX1A-202ENST00000342310 ZDHHC9Q9Y397 364 aa15.07■□□□□ 0
LMX1A-202ENST00000342310 MROH1Q8NDA8 1641 aa15.07■□□□□ 0
LMX1A-202ENST00000342310 DNM1Q05193 864 aaKnown RBP15.06■□□□□ 0
LMX1A-202ENST00000342310 KIF1BPQ96EK5 621 aa15.06■□□□□ 0
LMX1A-202ENST00000342310 PDRG1Q9NUG6 133 aa15.06■□□□□ 0
LMX1A-202ENST00000342310 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
LMX1A-202ENST00000342310 FAM227BQ96M60 508 aa15.06■□□□□ 0
LMX1A-202ENST00000342310 PODXL2Q9NZ53 605 aa15.06■□□□□ 0
LMX1A-202ENST00000342310 CD163L1Q9NR16 1453 aa15.05■□□□□ 0
LMX1A-202ENST00000342310 A0A0U1RQG5 324 aaPredicted RBP15.05■□□□□ 0
LMX1A-202ENST00000342310 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ 0
LMX1A-202ENST00000342310 RAPGEF4Q8WZA2 1011 aa15.05■□□□□ 0
LMX1A-202ENST00000342310 H3BQV1 296 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 RAB11FIP3O75154 756 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 NEXNQ0ZGT2 675 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 GORABQ5T7V8 394 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 IFFO2Q5TF58 517 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 ZNF592Q92610 1267 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 PIK3R4Q99570 1358 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 UQCRHLA0A096LP55 91 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 UQCRHP07919 91 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 MYD88Q99836 296 aa15.05■□□□□ -0
LMX1A-202ENST00000342310 HECW2Q9P2P5 1572 aa15.04■□□□□ -0
LMX1A-202ENST00000342310 GJB2P29033 226 aa15.04■□□□□ -0
LMX1A-202ENST00000342310 CPS1P31327 1500 aa15.04■□□□□ -0
LMX1A-202ENST00000342310 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
LMX1A-202ENST00000342310 CYP46A1Q9Y6A2 500 aa15.04■□□□□ -0
LMX1A-202ENST00000342310 NEXMIFQ5QGS0 1516 aa15.04■□□□□ -0
LMX1A-202ENST00000342310 WDR33Q9C0J8 1336 aaKnown RBP15.03■□□□□ -0
LMX1A-202ENST00000342310 MBD3O95983 291 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 CHGBP05060 677 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 ADCK5Q3MIX3 580 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 PLEKHO1Q53GL0 409 aaPredicted RBP15.03■□□□□ -0
LMX1A-202ENST00000342310 CHST3Q7LGC8 479 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 RUFY2Q8WXA3 655 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 NRXN1Q9ULB1 1477 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 FLT4P35916 1363 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 RRP9O43818 475 aaKnown RBP15.03■□□□□ -0
LMX1A-202ENST00000342310 PTH1RQ03431 593 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 ABCA9Q8IUA7 1624 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 FAM184AQ8NB25 1140 aa15.03■□□□□ -0
LMX1A-202ENST00000342310 STX6O43752 255 aa15.02■□□□□ -0
LMX1A-202ENST00000342310 DDX46Q7L014 1031 aaKnown RBP15.02■□□□□ -0
LMX1A-202ENST00000342310 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
LMX1A-202ENST00000342310 SYT1P21579 422 aa15.02□□□□□ -0.01
LMX1A-202ENST00000342310 CCDC129Q6ZRS4 1044 aa15.02□□□□□ -0.01
LMX1A-202ENST00000342310 UBE3BQ7Z3V4 1068 aa15.02□□□□□ -0.01
LMX1A-202ENST00000342310 SNRKQ9NRH2 765 aa15.02□□□□□ -0.01
LMX1A-202ENST00000342310 ALKQ9UM73 1620 aa15.02□□□□□ -0.01
LMX1A-202ENST00000342310 LARGE1O95461 756 aa15.01□□□□□ -0.01
LMX1A-202ENST00000342310 FRMPD1Q5SYB0 1578 aa15.01□□□□□ -0.01
LMX1A-202ENST00000342310 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
LMX1A-202ENST00000342310 LRSAM1Q6UWE0 723 aa15.01□□□□□ -0.01
LMX1A-202ENST00000342310 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
LMX1A-202ENST00000342310 ZHX1Q9UKY1 873 aaPredicted RBP15.01□□□□□ -0.01
LMX1A-202ENST00000342310 SHPRHQ149N8 1683 aa15.01□□□□□ -0.01
LMX1A-202ENST00000342310 SLFNL1Q499Z3 407 aa15.01□□□□□ -0.01
LMX1A-202ENST00000342310 HSP90AB3PQ58FF7 597 aa15.01□□□□□ -0.01
LMX1A-202ENST00000342310 NPHP1O15259 732 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 CCT2P78371 535 aaKnown RBP15□□□□□ -0.01
LMX1A-202ENST00000342310 SYTL4Q96C24 671 aaPredicted RBP15□□□□□ -0.01
LMX1A-202ENST00000342310 CHMP4CQ96CF2 233 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 TLR7Q9NYK1 1049 aaKnown RBP15□□□□□ -0.01
LMX1A-202ENST00000342310 LIMCH1Q9UPQ0 1083 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 ZSCAN21Q9Y5A6 473 aaPredicted RBP15□□□□□ -0.01
LMX1A-202ENST00000342310 SNX14Q9Y5W7 946 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 PROSER2Q86WR7 435 aaPredicted RBP15□□□□□ -0.01
LMX1A-202ENST00000342310 PTCH1Q13635 1447 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 IGSF3O75054 1194 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 PHF14O94880 888 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 MCM2P49736 904 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 BRPF1P55201 1214 aaPredicted RBP15□□□□□ -0.01
LMX1A-202ENST00000342310 PDZRN4Q6ZMN7 1036 aaPredicted RBP15□□□□□ -0.01
LMX1A-202ENST00000342310 COPS6Q7L5N1 327 aa15□□□□□ -0.01
LMX1A-202ENST00000342310 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
LMX1A-202ENST00000342310 ECHDC1Q9NTX5 307 aa14.99□□□□□ -0.01
LMX1A-202ENST00000342310 A0A087WWV3 80 aa14.99□□□□□ -0.01
LMX1A-202ENST00000342310 ADCY5O95622 1261 aa14.99□□□□□ -0.01
LMX1A-202ENST00000342310 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
LMX1A-202ENST00000342310 ZRSR1Q15695 479 aaKnown RBP14.99□□□□□ -0.01
LMX1A-202ENST00000342310 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
LMX1A-202ENST00000342310 ANKRD24Q8TF21 1146 aa14.99□□□□□ -0.01
LMX1A-202ENST00000342310 ERCC4Q92889 916 aaPredicted RBP14.99□□□□□ -0.01
LMX1A-202ENST00000342310 BICC1Q9H694 974 aaKnown RBP14.99□□□□□ -0.01
LMX1A-202ENST00000342310 RBM8AQ9Y5S9 174 aaKnown RBP14.99□□□□□ -0.01
LMX1A-202ENST00000342310 VWDEQ8N2E2 1590 aa14.99□□□□□ -0.01
LMX1A-202ENST00000342310 A2ML1A8K2U0 1454 aa14.99□□□□□ -0.01
LMX1A-202ENST00000342310 TAF7LQ5H9L4 462 aa14.99□□□□□ -0.01
LMX1A-202ENST00000342310 STRN4Q9NRL3 753 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms