RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 RNF34Q969K3 372 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 GRPEL1Q9HAV7 217 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 INTUQ9ULD6 942 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 SORBS3O60504 671 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 TTLL5Q6EMB2 1281 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 RINLQ6ZS11 566 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 CXorf38Q8TB03 319 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 PARD3BQ8TEW8 1205 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 PNMA5Q96PV4 448 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 TRAIPQ9BWF2 469 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 MAP2K2P36507 400 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 PLCB4Q15147 1175 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 WASHC4Q2M389 1173 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 MICALL1Q8N3F8 863 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 GBP4Q96PP9 640 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 ELL2O00472 640 aaPredicted RBP3.79□□□□□ -1.8
SOCS4-201ENST00000339298 TMEM127O75204 238 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 TPM2P07951 284 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 NF2P35240 595 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 AIMP1Q12904 312 aaKnown RBP3.79□□□□□ -1.8
SOCS4-201ENST00000339298 P3H1Q32P28 736 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 EML3Q32P44 896 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 KRT25Q7Z3Z0 450 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 SAP30BPQ9UHR5 308 aaKnown RBP3.79□□□□□ -1.8
SOCS4-201ENST00000339298 RABGAP1Q9Y3P9 1069 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 DAAM1Q9Y4D1 1078 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 SPDYE5A6NIY4 337 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 MAP4K4O95819 1239 aaPredicted RBP3.79□□□□□ -1.8
SOCS4-201ENST00000339298 PRKAR2AP13861 404 aaKnown RBP3.79□□□□□ -1.8
SOCS4-201ENST00000339298 KRT20P35900 424 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 DPYDQ12882 1025 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 PUS10Q3MIT2 529 aaKnown RBP3.79□□□□□ -1.8
SOCS4-201ENST00000339298 CAMKK1Q8N5S9 505 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 TTC8Q8TAM2 541 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 STK32AQ8WU08 396 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 TRIM5Q9C035 493 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.79□□□□□ -1.8
SOCS4-201ENST00000339298 SNX13Q9Y5W8 968 aa3.79□□□□□ -1.8
SOCS4-201ENST00000339298 SFI1A8K8P3 1242 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 APOL3O95236 402 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 EZRP15311 586 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 CASQ1P31415 396 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 KCNJ6P48051 423 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 ARHGAP29Q52LW3 1261 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 PPP1R12CQ9BZL4 782 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 GPN3Q9UHW5 284 aaPredicted RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 V9GYY5 206 aaPredicted RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 STRN3Q13033 797 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 RGL3Q3MIN7 710 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 TMTC2Q8N394 836 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 MGARPQ8TDB4 240 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 RBM42Q9BTD8 480 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 CYLDQ9NQC7 956 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 TSR3Q9UJK0 312 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 PPP1R12BO60237 982 aaPredicted RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 NR6A1Q15406 480 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 SMAD1Q15797 465 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 LMBRD2Q68DH5 695 aaPredicted RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 RNF168Q8IYW5 571 aaPredicted RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 USP6NLQ92738 828 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 CDK5RAP3Q96JB5 506 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 STK31Q9BXU1 1019 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 ZC3H12CQ9C0D7 883 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 SIL1Q9H173 461 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 ATICP31939 592 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 NUCB2P80303 420 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 PRPF4BQ13523 1007 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 NCOA4Q13772 614 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 AP1ARQ63HQ0 302 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 CHCHD4Q8N4Q1 142 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 NKX2-3Q8TAU0 364 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 SYMPKQ92797 1274 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 NIF3L1Q9GZT8 377 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 PUF60Q9UHX1 559 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 TPX2Q9ULW0 747 aaKnown RBP3.78□□□□□ -1.8
SOCS4-201ENST00000339298 RABL2BQ9UNT1 228 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 EEA1Q15075 1411 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 MOXD2PA6NHM9 499 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 STK3Q13188 491 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 CFAP100Q494V2 611 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 NOD1Q9Y239 953 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 AFG3L2Q9Y4W6 797 aa3.78□□□□□ -1.8
SOCS4-201ENST00000339298 ZRANB2O95218 330 aaKnown RBP eCLIP3.77□□□□□ -1.81
SOCS4-201ENST00000339298 FAPQ12884 760 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 MTERF2Q49AM1 385 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 ZKSCAN2Q63HK3 967 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 CCDC191Q8NCU4 936 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 WDR48Q8TAF3 677 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 DUSP9Q99956 384 aaKnown RBP3.77□□□□□ -1.81
SOCS4-201ENST00000339298 PCDHB11Q9Y5F2 797 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 DNAJC6O75061 913 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 OFD1O75665 1012 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 ELF2Q15723 593 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 CCDC144BQ3MJ40 725 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 TBC1D10BQ4KMP7 808 aaPredicted RBP3.77□□□□□ -1.81
SOCS4-201ENST00000339298 USP48Q86UV5 1035 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 PDCL2Q8N4E4 241 aa3.77□□□□□ -1.81
SOCS4-201ENST00000339298 SEPT9Q9UHD8 586 aaPredicted RBP3.77□□□□□ -1.81
SOCS4-201ENST00000339298 MRPL42Q9Y6G3 142 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms