RNA–Protein interactions for RNA: ENST00000336777.9

SSX2-201, Transcript of SSX family member 2, humanhuman

TSL 1 (best) BASIC

Gene SSX2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2-201ENST00000336777 SLC16A10Q8TF71 515 aa13.94□□□□□ -0.18
SSX2-201ENST00000336777 UTRNP46939 3433 aa13.94□□□□□ -0.18
SSX2-201ENST00000336777 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
SSX2-201ENST00000336777 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
SSX2-201ENST00000336777 ZNF790Q6PG37 636 aa13.93□□□□□ -0.18
SSX2-201ENST00000336777 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
SSX2-201ENST00000336777 ZNF496Q96IT1 587 aaPredicted RBP13.93□□□□□ -0.18
SSX2-201ENST00000336777 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
SSX2-201ENST00000336777 SENP3-EIF4A1A0A087X0R7 540 aa13.92□□□□□ -0.18
SSX2-201ENST00000336777 CCDC184Q52MB2 194 aa13.92□□□□□ -0.18
SSX2-201ENST00000336777 MIS18AQ9NYP9 233 aa13.92□□□□□ -0.18
SSX2-201ENST00000336777 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
SSX2-201ENST00000336777 ZNF330Q9Y3S2 320 aaPredicted RBP13.92□□□□□ -0.18
SSX2-201ENST00000336777 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
SSX2-201ENST00000336777 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
SSX2-201ENST00000336777 GOLGB1Q14789 3259 aaKnown RBP13.92□□□□□ -0.18
SSX2-201ENST00000336777 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
SSX2-201ENST00000336777 CCDC87Q9NVE4 849 aa13.91□□□□□ -0.18
SSX2-201ENST00000336777 COL15A1P39059 1388 aa13.91□□□□□ -0.18
SSX2-201ENST00000336777 PRAMEF22A3QJZ6 481 aa13.9□□□□□ -0.18
SSX2-201ENST00000336777 CYP19A1P11511 503 aaPredicted RBP13.9□□□□□ -0.18
SSX2-201ENST00000336777 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.18
SSX2-201ENST00000336777 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
SSX2-201ENST00000336777 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
SSX2-201ENST00000336777 INTS5Q6P9B9 1019 aaKnown RBP13.9□□□□□ -0.18
SSX2-201ENST00000336777 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
SSX2-201ENST00000336777 NLGN2Q8NFZ4 835 aa13.9□□□□□ -0.18
SSX2-201ENST00000336777 ARHGEF1Q92888 912 aaKnown RBP13.9□□□□□ -0.18
SSX2-201ENST00000336777 SYT17Q9BSW7 474 aa13.9□□□□□ -0.18
SSX2-201ENST00000336777 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
SSX2-201ENST00000336777 LAMB4A4D0S4 1761 aa13.9□□□□□ -0.18
SSX2-201ENST00000336777 RPS6KA4O75676 772 aa13.9□□□□□ -0.19
SSX2-201ENST00000336777 RFC4P35249 363 aa13.9□□□□□ -0.19
SSX2-201ENST00000336777 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.19
SSX2-201ENST00000336777 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
SSX2-201ENST00000336777 SCN7AQ01118 1682 aa13.89□□□□□ -0.19
SSX2-201ENST00000336777 HMGB2P26583 209 aaKnown RBP13.89□□□□□ -0.19
SSX2-201ENST00000336777 RC3H1Q5TC82 1133 aaKnown RBP13.89□□□□□ -0.19
SSX2-201ENST00000336777 ADAMTS8Q9UP79 889 aa13.89□□□□□ -0.19
SSX2-201ENST00000336777 ANP32CO43423 234 aa13.88□□□□□ -0.19
SSX2-201ENST00000336777 MMP10P09238 476 aa13.88□□□□□ -0.19
SSX2-201ENST00000336777 RIPK4P57078 832 aa13.88□□□□□ -0.19
SSX2-201ENST00000336777 PNNQ9H307 717 aaKnown RBP13.88□□□□□ -0.19
SSX2-201ENST00000336777 USP42Q9H9J4 1324 aaKnown RBP13.87□□□□□ -0.19
SSX2-201ENST00000336777 GYS1P13807 737 aa13.87□□□□□ -0.19
SSX2-201ENST00000336777 TMPOP42166 694 aaKnown RBP13.87□□□□□ -0.19
SSX2-201ENST00000336777 HTATSF1O43719 755 aaKnown RBP13.86□□□□□ -0.19
SSX2-201ENST00000336777 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
SSX2-201ENST00000336777 STARD3NLO95772 234 aa13.85□□□□□ -0.19
SSX2-201ENST00000336777 A1BGP04217 495 aa13.85□□□□□ -0.19
SSX2-201ENST00000336777 FKBP8Q14318 412 aa13.85□□□□□ -0.19
SSX2-201ENST00000336777 TAF7Q15545 349 aaPredicted RBP13.85□□□□□ -0.19
SSX2-201ENST00000336777 USPL1Q5W0Q7 1092 aa13.85□□□□□ -0.19
SSX2-201ENST00000336777 RUNDC1Q96C34 613 aa13.85□□□□□ -0.19
SSX2-201ENST00000336777 MRS2Q9HD23 443 aa13.85□□□□□ -0.19
SSX2-201ENST00000336777 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
SSX2-201ENST00000336777 BCORQ6W2J9 1755 aa13.84□□□□□ -0.19
SSX2-201ENST00000336777 LAS1LQ9Y4W2 734 aaKnown RBP13.84□□□□□ -0.19
SSX2-201ENST00000336777 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
SSX2-201ENST00000336777 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
SSX2-201ENST00000336777 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.2
SSX2-201ENST00000336777 C10orf71Q711Q0 1435 aa13.83□□□□□ -0.2
SSX2-201ENST00000336777 ZPR1O75312 459 aa13.82□□□□□ -0.2
SSX2-201ENST00000336777 DDR1Q08345 913 aa13.82□□□□□ -0.2
SSX2-201ENST00000336777 KIAA1551Q9HCM1 1747 aa13.82□□□□□ -0.2
SSX2-201ENST00000336777 APAF1O14727 1248 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 SNRPA1P09661 255 aaKnown RBP13.81□□□□□ -0.2
SSX2-201ENST00000336777 LMOD3Q0VAK6 560 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 BICDL1Q6ZP65 573 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 GPR162Q16538 588 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 NLGN1Q8N2Q7 840 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 BCL2L12Q9HB09 334 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 TRIM35Q9UPQ4 493 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 PARP3Q9Y6F1 533 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 PXDNLA1KZ92 1463 aa13.81□□□□□ -0.2
SSX2-201ENST00000336777 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
SSX2-201ENST00000336777 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
SSX2-201ENST00000336777 EIF5P55010 431 aaKnown RBP13.8□□□□□ -0.2
SSX2-201ENST00000336777 EIF4A1P60842 406 aaKnown RBP13.8□□□□□ -0.2
SSX2-201ENST00000336777 KRT24Q2M2I5 525 aa13.8□□□□□ -0.2
SSX2-201ENST00000336777 NGEFQ8N5V2 710 aa13.8□□□□□ -0.2
SSX2-201ENST00000336777 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
SSX2-201ENST00000336777 NARFQ9UHQ1 456 aa13.8□□□□□ -0.2
SSX2-201ENST00000336777 CARMIL3Q8ND23 1372 aa13.79□□□□□ -0.2
SSX2-201ENST00000336777 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSX2-201ENST00000336777 NPM2Q86SE8 214 aaKnown RBP13.79□□□□□ -0.2
SSX2-201ENST00000336777 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
SSX2-201ENST00000336777 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
SSX2-201ENST00000336777 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
SSX2-201ENST00000336777 MYL6BP14649 208 aa13.78□□□□□ -0.2
SSX2-201ENST00000336777 IL6STP40189 918 aaPredicted RBP13.78□□□□□ -0.2
SSX2-201ENST00000336777 NFIXQ14938 502 aa13.78□□□□□ -0.2
SSX2-201ENST00000336777 NBPF10Q6P3W6 841 aaKnown RBP13.78□□□□□ -0.2
SSX2-201ENST00000336777 DZIP3Q86Y13 1208 aaKnown RBP13.78□□□□□ -0.2
SSX2-201ENST00000336777 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
SSX2-201ENST00000336777 CD2APQ9Y5K6 639 aa13.78□□□□□ -0.2
SSX2-201ENST00000336777 POLRMTO00411 1230 aaKnown RBP13.77□□□□□ -0.21
SSX2-201ENST00000336777 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
SSX2-201ENST00000336777 TBC1D9BQ66K14 1250 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms