RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
APOBEC3B-202ENST00000335760 LAMB4A4D0S4 1761 aa18.21■□□□□ 0.51
APOBEC3B-202ENST00000335760 HOXB7P09629 217 aa18.2■□□□□ 0.5
APOBEC3B-202ENST00000335760 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
APOBEC3B-202ENST00000335760 CRKLP46109 303 aaKnown RBP18.2■□□□□ 0.5
APOBEC3B-202ENST00000335760 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 A1BGP04217 495 aa18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 NBPF14Q5TI25 921 aa18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 AK7Q96M32 723 aa18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 CCDC87Q9NVE4 849 aa18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 STK32BQ9NY57 414 aa18.19■□□□□ 0.5
APOBEC3B-202ENST00000335760 ZNF827Q17R98 1081 aa18.18■□□□□ 0.5
APOBEC3B-202ENST00000335760 RC3H1Q5TC82 1133 aaKnown RBP18.18■□□□□ 0.5
APOBEC3B-202ENST00000335760 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
APOBEC3B-202ENST00000335760 ANO8Q9HCE9 1232 aaPredicted RBP18.18■□□□□ 0.5
APOBEC3B-202ENST00000335760 SOS1Q07889 1333 aaPredicted RBP18.18■□□□□ 0.5
APOBEC3B-202ENST00000335760 HDGFL1Q5TGJ6 251 aa18.17■□□□□ 0.5
APOBEC3B-202ENST00000335760 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
APOBEC3B-202ENST00000335760 GNPATO15228 680 aa18.17■□□□□ 0.5
APOBEC3B-202ENST00000335760 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
APOBEC3B-202ENST00000335760 PIP4K2AP48426 406 aaPredicted RBP18.17■□□□□ 0.5
APOBEC3B-202ENST00000335760 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
APOBEC3B-202ENST00000335760 TFCP2L1Q9NZI6 479 aa18.17■□□□□ 0.5
APOBEC3B-202ENST00000335760 ZBTB1Q9Y2K1 713 aa18.17■□□□□ 0.5
APOBEC3B-202ENST00000335760 VAMP4O75379 141 aa18.16■□□□□ 0.5
APOBEC3B-202ENST00000335760 RPS6KA4O75676 772 aa18.15■□□□□ 0.5
APOBEC3B-202ENST00000335760 NBPF26B4DH59 902 aa18.14■□□□□ 0.49
APOBEC3B-202ENST00000335760 CCDC30Q5VVM6 783 aa18.14■□□□□ 0.49
APOBEC3B-202ENST00000335760 NBPF10Q6P3W6 841 aaKnown RBP18.14■□□□□ 0.49
APOBEC3B-202ENST00000335760 SMIM5Q71RC9 77 aa18.14■□□□□ 0.49
APOBEC3B-202ENST00000335760 NBPF15Q8N660 670 aa18.14■□□□□ 0.49
APOBEC3B-202ENST00000335760 CHMP4AQ9BY43 222 aa18.14■□□□□ 0.49
APOBEC3B-202ENST00000335760 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
APOBEC3B-202ENST00000335760 UBR3Q6ZT12 1888 aa18.13■□□□□ 0.49
APOBEC3B-202ENST00000335760 TUBGCP6Q96RT7 1819 aa18.13■□□□□ 0.49
APOBEC3B-202ENST00000335760 ERBB4Q15303 1308 aa18.13■□□□□ 0.49
APOBEC3B-202ENST00000335760 PHF14O94880 888 aa18.13■□□□□ 0.49
APOBEC3B-202ENST00000335760 MYL6BP14649 208 aa18.13■□□□□ 0.49
APOBEC3B-202ENST00000335760 AMIGO3Q86WK7 504 aa18.13■□□□□ 0.49
APOBEC3B-202ENST00000335760 CHPF2Q9P2E5 772 aa18.13■□□□□ 0.49
APOBEC3B-202ENST00000335760 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
APOBEC3B-202ENST00000335760 TCERG1O14776 1098 aaKnown RBP18.12■□□□□ 0.49
APOBEC3B-202ENST00000335760 IL6STP40189 918 aaPredicted RBP18.12■□□□□ 0.49
APOBEC3B-202ENST00000335760 PDIA6Q15084 440 aa18.12■□□□□ 0.49
APOBEC3B-202ENST00000335760 DDX21Q9NR30 783 aaKnown RBP eCLIP18.12■□□□□ 0.49
APOBEC3B-202ENST00000335760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.11■□□□□ 0.49
APOBEC3B-202ENST00000335760 ANXA1P04083 346 aa18.11■□□□□ 0.49
APOBEC3B-202ENST00000335760 EIF5P55010 431 aaKnown RBP18.11■□□□□ 0.49
APOBEC3B-202ENST00000335760 R3HDM1Q15032 1099 aaKnown RBP18.11■□□□□ 0.49
APOBEC3B-202ENST00000335760 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
APOBEC3B-202ENST00000335760 TRAPPC3LQ5T215 181 aa18.11■□□□□ 0.49
APOBEC3B-202ENST00000335760 DBF4Q9UBU7 674 aaPredicted RBP18.11■□□□□ 0.49
APOBEC3B-202ENST00000335760 CT47B1P0C2W7 299 aaPredicted RBP18.1■□□□□ 0.49
APOBEC3B-202ENST00000335760 SSFA2P28290 1259 aa18.1■□□□□ 0.49
APOBEC3B-202ENST00000335760 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
APOBEC3B-202ENST00000335760 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
APOBEC3B-202ENST00000335760 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
APOBEC3B-202ENST00000335760 QSER1Q2KHR3 1735 aa18.09■□□□□ 0.49
APOBEC3B-202ENST00000335760 ADRA2BP18089 450 aa18.09■□□□□ 0.49
APOBEC3B-202ENST00000335760 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
APOBEC3B-202ENST00000335760 ARHGEF1Q92888 912 aaKnown RBP18.09■□□□□ 0.49
APOBEC3B-202ENST00000335760 COL15A1P39059 1388 aa18.09■□□□□ 0.49
APOBEC3B-202ENST00000335760 PSDA5PKW4 1024 aaPredicted RBP18.08■□□□□ 0.49
APOBEC3B-202ENST00000335760 MSH5O43196 834 aa18.08■□□□□ 0.49
APOBEC3B-202ENST00000335760 COL23A1Q86Y22 540 aaPredicted RBP18.08■□□□□ 0.49
APOBEC3B-202ENST00000335760 ARXQ96QS3 562 aa18.08■□□□□ 0.49
APOBEC3B-202ENST00000335760 HYPKQ9NX55 129 aa18.08■□□□□ 0.49
APOBEC3B-202ENST00000335760 A0A087WZG4 1122 aa18.07■□□□□ 0.48
APOBEC3B-202ENST00000335760 SLC4A2P04920 1241 aa18.07■□□□□ 0.48
APOBEC3B-202ENST00000335760 RFC4P35249 363 aa18.07■□□□□ 0.48
APOBEC3B-202ENST00000335760 ZNF428Q96B54 188 aa18.07■□□□□ 0.48
APOBEC3B-202ENST00000335760 LRP10Q7Z4F1 713 aa18.06■□□□□ 0.48
APOBEC3B-202ENST00000335760 AIMP1Q12904 312 aaKnown RBP18.05■□□□□ 0.48
APOBEC3B-202ENST00000335760 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
APOBEC3B-202ENST00000335760 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
APOBEC3B-202ENST00000335760 SSH1Q8WYL5 1049 aa18.05■□□□□ 0.48
APOBEC3B-202ENST00000335760 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
APOBEC3B-202ENST00000335760 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
APOBEC3B-202ENST00000335760 TBC1D2BQ9UPU7 963 aa18.05■□□□□ 0.48
APOBEC3B-202ENST00000335760 C4AP0C0L4 1744 aa18.05■□□□□ 0.48
APOBEC3B-202ENST00000335760 ALDH1L2Q3SY69 923 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 TTLL7Q6ZT98 887 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 COPS6Q7L5N1 327 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 BCL2L13Q9BXK5 485 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 SRP68Q9UHB9 627 aaKnown RBP18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 ZPR1O75312 459 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 RARSP54136 660 aaKnown RBP18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 KIF6Q6ZMV9 814 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 G2E3Q7L622 706 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 MRPL50Q8N5N7 158 aaKnown RBP18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 SMC4Q9NTJ3 1288 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 NARFQ9UHQ1 456 aa18.04■□□□□ 0.48
APOBEC3B-202ENST00000335760 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
APOBEC3B-202ENST00000335760 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
APOBEC3B-202ENST00000335760 USP42Q9H9J4 1324 aaKnown RBP18.02■□□□□ 0.48
APOBEC3B-202ENST00000335760 CASZ1Q86V15 1759 aa18.02■□□□□ 0.47
APOBEC3B-202ENST00000335760 CAMTA2O94983 1202 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms