RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 KLHL34Q8N239 644 aa28.53■■■□□ 2.16
TNRC18-201ENST00000328270 ZBTB1Q9Y2K1 713 aa28.53■■■□□ 2.16
TNRC18-201ENST00000328270 CCDC184Q52MB2 194 aa28.52■■■□□ 2.16
TNRC18-201ENST00000328270 TEX13AQ9BXU3 409 aaPredicted RBP28.52■■■□□ 2.16
TNRC18-201ENST00000328270 RRP7AQ9Y3A4 280 aaKnown RBP28.51■■■□□ 2.15
TNRC18-201ENST00000328270 MIS18AQ9NYP9 233 aa28.5■■■□□ 2.15
TNRC18-201ENST00000328270 LMOD3Q0VAK6 560 aa28.49■■■□□ 2.15
TNRC18-201ENST00000328270 PNISRQ8TF01 805 aaKnown RBP28.49■■■□□ 2.15
TNRC18-201ENST00000328270 LAMB4A4D0S4 1761 aa28.49■■■□□ 2.15
TNRC18-201ENST00000328270 COL15A1P39059 1388 aa28.49■■■□□ 2.15
TNRC18-201ENST00000328270 USP42Q9H9J4 1324 aaKnown RBP28.48■■■□□ 2.15
TNRC18-201ENST00000328270 GYS1P13807 737 aa28.48■■■□□ 2.15
TNRC18-201ENST00000328270 SRP68Q9UHB9 627 aaKnown RBP28.48■■■□□ 2.15
TNRC18-201ENST00000328270 CANXP27824 592 aaKnown RBP28.47■■■□□ 2.15
TNRC18-201ENST00000328270 NEUROD2Q15784 382 aa28.47■■■□□ 2.15
TNRC18-201ENST00000328270 NLGN1Q8N2Q7 840 aa28.47■■■□□ 2.15
TNRC18-201ENST00000328270 SNRPA1P09661 255 aaKnown RBP28.46■■■□□ 2.15
TNRC18-201ENST00000328270 MMP10P09238 476 aa28.45■■■□□ 2.14
TNRC18-201ENST00000328270 PRAMEF22A3QJZ6 481 aa28.44■■■□□ 2.14
TNRC18-201ENST00000328270 USP16Q9Y5T5 823 aa28.44■■■□□ 2.14
TNRC18-201ENST00000328270 ZPR1O75312 459 aa28.42■■■□□ 2.14
TNRC18-201ENST00000328270 A1BGP04217 495 aa28.42■■■□□ 2.14
TNRC18-201ENST00000328270 EIF5P55010 431 aaKnown RBP28.42■■■□□ 2.14
TNRC18-201ENST00000328270 MRS2Q9HD23 443 aa28.42■■■□□ 2.14
TNRC18-201ENST00000328270 NLGN2Q8NFZ4 835 aa28.41■■■□□ 2.14
TNRC18-201ENST00000328270 TRIM35Q9UPQ4 493 aa28.41■■■□□ 2.14
TNRC18-201ENST00000328270 KIF13BQ9NQT8 1826 aa28.41■■■□□ 2.14
TNRC18-201ENST00000328270 GOLGB1Q14789 3259 aaKnown RBP28.4■■■□□ 2.14
TNRC18-201ENST00000328270 SCN7AQ01118 1682 aa28.4■■■□□ 2.14
TNRC18-201ENST00000328270 DCAF8L1A6NGE4 600 aa28.4■■■□□ 2.14
TNRC18-201ENST00000328270 FKBP8Q14318 412 aa28.4■■■□□ 2.14
TNRC18-201ENST00000328270 USPL1Q5W0Q7 1092 aa28.4■■■□□ 2.14
TNRC18-201ENST00000328270 NARFQ9UHQ1 456 aa28.4■■■□□ 2.14
TNRC18-201ENST00000328270 TSPYL4Q9UJ04 414 aa28.4■■■□□ 2.14
TNRC18-201ENST00000328270 CD2APQ9Y5K6 639 aa28.4■■■□□ 2.14
TNRC18-201ENST00000328270 APAF1O14727 1248 aa28.39■■■□□ 2.14
TNRC18-201ENST00000328270 IL6STP40189 918 aaPredicted RBP28.39■■■□□ 2.14
TNRC18-201ENST00000328270 EIF4A1P60842 406 aaKnown RBP28.39■■■□□ 2.14
TNRC18-201ENST00000328270 ZNF330Q9Y3S2 320 aaPredicted RBP28.39■■■□□ 2.14
TNRC18-201ENST00000328270 A0A087WZG4 1122 aa28.37■■■□□ 2.13
TNRC18-201ENST00000328270 UTRNP46939 3433 aa28.37■■■□□ 2.13
TNRC18-201ENST00000328270 BCORQ6W2J9 1755 aa28.37■■■□□ 2.13
TNRC18-201ENST00000328270 GIGYF1O75420 1035 aaPredicted RBP28.36■■■□□ 2.13
TNRC18-201ENST00000328270 BABAM1Q9NWV8 329 aa28.36■■■□□ 2.13
TNRC18-201ENST00000328270 AFDNP55196 1824 aaKnown RBP28.35■■■□□ 2.13
TNRC18-201ENST00000328270 PIP4K2AP48426 406 aaPredicted RBP28.35■■■□□ 2.13
TNRC18-201ENST00000328270 PARP3Q9Y6F1 533 aa28.35■■■□□ 2.13
TNRC18-201ENST00000328270 BCL2L12Q9HB09 334 aa28.34■■■□□ 2.13
TNRC18-201ENST00000328270 DDR1Q08345 913 aa28.33■■■□□ 2.13
TNRC18-201ENST00000328270 NPM2Q86SE8 214 aaKnown RBP28.33■■■□□ 2.13
TNRC18-201ENST00000328270 C10orf71Q711Q0 1435 aa28.33■■■□□ 2.13
TNRC18-201ENST00000328270 KIAA1551Q9HCM1 1747 aa28.32■■■□□ 2.12
TNRC18-201ENST00000328270 TBC1D2BQ9UPU7 963 aa28.32■■■□□ 2.12
TNRC18-201ENST00000328270 NBPF26B4DH59 902 aa28.31■■■□□ 2.12
TNRC18-201ENST00000328270 TM4SF1P30408 202 aa28.31■■■□□ 2.12
TNRC18-201ENST00000328270 NBPF10Q6P3W6 841 aaKnown RBP28.31■■■□□ 2.12
TNRC18-201ENST00000328270 NBPF15Q8N660 670 aa28.31■■■□□ 2.12
TNRC18-201ENST00000328270 N4BP2Q86UW6 1770 aaPredicted RBP28.31■■■□□ 2.12
TNRC18-201ENST00000328270 CHL1O00533 1208 aa28.3■■■□□ 2.12
TNRC18-201ENST00000328270 LAS1LQ9Y4W2 734 aaKnown RBP28.3■■■□□ 2.12
TNRC18-201ENST00000328270 NRXN2Q9P2S2 1712 aa28.29■■■□□ 2.12
TNRC18-201ENST00000328270 POLRMTO00411 1230 aaKnown RBP28.29■■■□□ 2.12
TNRC18-201ENST00000328270 NFIXQ14938 502 aa28.29■■■□□ 2.12
TNRC18-201ENST00000328270 CHD4Q14839 1912 aa28.28■■■□□ 2.12
TNRC18-201ENST00000328270 GPR162Q16538 588 aa28.28■■■□□ 2.12
TNRC18-201ENST00000328270 DZIP3Q86Y13 1208 aaKnown RBP28.28■■■□□ 2.12
TNRC18-201ENST00000328270 PELP1Q8IZL8 1130 aaKnown RBP28.28■■■□□ 2.12
TNRC18-201ENST00000328270 CAMTA2O94983 1202 aa28.27■■■□□ 2.12
TNRC18-201ENST00000328270 PXDNLA1KZ92 1463 aa28.26■■■□□ 2.11
TNRC18-201ENST00000328270 CFAP44Q96MT7 982 aa28.24■■■□□ 2.11
TNRC18-201ENST00000328270 BRCA1P38398 1863 aaKnown RBP28.23■■■□□ 2.11
TNRC18-201ENST00000328270 CALD1Q05682 793 aaKnown RBP28.23■■■□□ 2.11
TNRC18-201ENST00000328270 TBC1D9BQ66K14 1250 aa28.23■■■□□ 2.11
TNRC18-201ENST00000328270 BICDL1Q6ZP65 573 aa28.23■■■□□ 2.11
TNRC18-201ENST00000328270 SENP3-EIF4A1A0A087X0R7 540 aa28.22■■■□□ 2.11
TNRC18-201ENST00000328270 YBX3P16989 372 aaKnown RBP eCLIP28.22■■■□□ 2.11
TNRC18-201ENST00000328270 ERBB4Q15303 1308 aa28.21■■■□□ 2.11
TNRC18-201ENST00000328270 TGFB2P61812 414 aa28.21■■■□□ 2.11
TNRC18-201ENST00000328270 KRT24Q2M2I5 525 aa28.21■■■□□ 2.11
TNRC18-201ENST00000328270 NUP98P52948 1817 aa28.2■■■□□ 2.11
TNRC18-201ENST00000328270 SERPINB2P05120 415 aa28.2■■■□□ 2.1
TNRC18-201ENST00000328270 ZNF853P0CG23 659 aa28.2■■■□□ 2.1
TNRC18-201ENST00000328270 EIF2S2P20042 333 aaKnown RBP28.2■■■□□ 2.1
TNRC18-201ENST00000328270 MBIPQ9NS73 344 aa28.2■■■□□ 2.1
TNRC18-201ENST00000328270 IFT57Q9NWB7 429 aa28.2■■■□□ 2.1
TNRC18-201ENST00000328270 MYL6BP14649 208 aa28.19■■■□□ 2.1
TNRC18-201ENST00000328270 FAM9BQ8IZU0 186 aa28.19■■■□□ 2.1
TNRC18-201ENST00000328270 NGEFQ8N5V2 710 aa28.19■■■□□ 2.1
TNRC18-201ENST00000328270 WWC3Q9ULE0 1092 aa28.19■■■□□ 2.1
TNRC18-201ENST00000328270 A0A0G2JLW4 131 aa28.18■■■□□ 2.1
TNRC18-201ENST00000328270 GNAI1P63096 354 aa28.18■■■□□ 2.1
TNRC18-201ENST00000328270 ZNF652Q9Y2D9 606 aa28.18■■■□□ 2.1
TNRC18-201ENST00000328270 CARMIL3Q8ND23 1372 aa28.18■■■□□ 2.1
TNRC18-201ENST00000328270 CCDC27Q2M243 656 aa28.17■■■□□ 2.1
TNRC18-201ENST00000328270 CLEC4GQ6UXB4 293 aa28.17■■■□□ 2.1
TNRC18-201ENST00000328270 ANKRD31Q8N7Z5 1873 aa28.17■■■□□ 2.1
TNRC18-201ENST00000328270 DPEP1P16444 411 aa28.16■■■□□ 2.1
TNRC18-201ENST00000328270 RGL2O15211 777 aa28.15■■■□□ 2.1
TNRC18-201ENST00000328270 NECTIN2Q92692 538 aa28.15■■■□□ 2.1
TNRC18-201ENST00000328270 SETDB2Q96T68 719 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms