RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 ZNF396Q96N95 335 aaPredicted RBP10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 MYOM3Q5VTT5 1437 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 PPP6R1Q9UPN7 881 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 PSMA5P28066 241 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 LRRC45Q96CN5 670 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 TMOD2Q9NZR1 351 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 CC2D2AQ9P2K1 1620 aa10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 POLR3GO15318 223 aaPredicted RBP10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 HLTFQ14527 1009 aaKnown RBP eCLIP10.23□□□□□ -0.77
SH3TC2-201ENST00000323829 ME1P48163 572 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 MTHFSP49914 203 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 SARNPP82979 210 aaKnown RBP10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 CTR9Q6PD62 1173 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 CACNA2D4Q7Z3S7 1137 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 CEP57L1Q8IYX8 460 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 ACRBPQ8NEB7 543 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 CPLX3Q8WVH0 158 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 SWAP70Q9UH65 585 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 GMNNO75496 209 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 CRCPO75575 148 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 CCDC57Q2TAC2 916 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 WDR66Q8TBY9 1149 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 SYNCQ9H7C4 482 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 FIBPO43427 364 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 SPA17Q15506 151 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 GEN1Q17RS7 908 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 SMC6Q96SB8 1091 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 ARAP1Q96P48 1450 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 MBD3O95983 291 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 PRR16Q569H4 304 aa10.22□□□□□ -0.77
SH3TC2-201ENST00000323829 RIOK3O14730 519 aaKnown RBP10.21□□□□□ -0.77
SH3TC2-201ENST00000323829 ZBTB41Q5SVQ8 909 aa10.21□□□□□ -0.77
SH3TC2-201ENST00000323829 INTS3Q68E01 1043 aaKnown RBP10.21□□□□□ -0.77
SH3TC2-201ENST00000323829 MPHOSPH8Q99549 860 aa10.21□□□□□ -0.77
SH3TC2-201ENST00000323829 NINLQ9Y2I6 1382 aa10.21□□□□□ -0.77
SH3TC2-201ENST00000323829 ROCK1Q13464 1354 aa10.21□□□□□ -0.77
SH3TC2-201ENST00000323829 CASQ1P31415 396 aa10.21□□□□□ -0.78
SH3TC2-201ENST00000323829 API5Q9BZZ5 524 aaKnown RBP10.21□□□□□ -0.78
SH3TC2-201ENST00000323829 BICDL2A1A5D9 508 aa10.21□□□□□ -0.78
SH3TC2-201ENST00000323829 PPP2R5CQ13362 524 aa10.21□□□□□ -0.78
SH3TC2-201ENST00000323829 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.21□□□□□ -0.78
SH3TC2-201ENST00000323829 ERICH3Q5RHP9 1530 aa10.21□□□□□ -0.78
SH3TC2-201ENST00000323829 GNAI1P63096 354 aa10.21□□□□□ -0.78
SH3TC2-201ENST00000323829 PANK1Q8TE04 598 aa10.21□□□□□ -0.78
SH3TC2-201ENST00000323829 NESP48681 1621 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 KCNA4P22459 653 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 MAATS1Q7Z4T9 603 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 SFMBT1Q9UHJ3 866 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 SETDB1Q15047 1291 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 ZNF530Q6P9A1 599 aaPredicted RBP10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 CCT6BQ92526 530 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 ALS2CR12Q96Q35 445 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 MAP4K4O95819 1239 aaPredicted RBP10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 CNTROBQ8N137 903 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 CACYBPQ9HB71 228 aaKnown RBP10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 ZNF652Q9Y2D9 606 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 UBTFL1P0CB47 393 aaPredicted RBP10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 MYL6BP14649 208 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 ARHGAP29Q52LW3 1261 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 IQCGQ9H095 443 aaKnown RBP10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 SNAPC4Q5SXM2 1469 aa10.2□□□□□ -0.78
SH3TC2-201ENST00000323829 NOL7Q9UMY1 257 aaKnown RBP10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 TNMDQ9H2S6 317 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 OPA1O60313 960 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 PSMD6Q15008 389 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 CCDC170Q8IYT3 715 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 TAOK3Q9H2K8 898 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 ACTN2P35609 894 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 SUDS3Q9H7L9 328 aaPredicted RBP10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 PRC1O43663 620 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 DIXDC1Q155Q3 683 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 CCDC30Q5VVM6 783 aa10.19□□□□□ -0.78
SH3TC2-201ENST00000323829 FYCO1Q9BQS8 1478 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 ZRANB2O95218 330 aaKnown RBP eCLIP10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 SPECC1LQ69YQ0 1117 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 FAM114A2Q9NRY5 505 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 PDZRN3Q9UPQ7 1066 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 CLEC11AQ9Y240 323 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 PSPC1Q8WXF1 523 aaKnown RBP10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 ZBTB9Q96C00 473 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 FRMD4BQ9Y2L6 1034 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 CBFA2T2O43439 604 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 PRPF40AO75400 957 aaKnown RBP10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 GJC1P36383 396 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 KLHL10Q6JEL2 608 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 CEP83Q9Y592 693 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 DDX27Q96GQ7 796 aaKnown RBP10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 TSG101Q99816 390 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 ZNF692Q9BU19 519 aaPredicted RBP10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 CUX1P39880 1505 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 BICD1Q96G01 975 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 TMOD3Q9NYL9 352 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 SLC52A1Q9NWF4 448 aa10.18□□□□□ -0.78
SH3TC2-201ENST00000323829 STARD3NLO95772 234 aa10.17□□□□□ -0.78
SH3TC2-201ENST00000323829 TDRD12Q587J7 1177 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms