RNA–Protein interactions for RNA: ENST00000317459.10

TRPT1-201, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPT1, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-201ENST00000317459 PNISRQ8TF01 805 aaKnown RBP26.98■■□□□ 1.91
TRPT1-201ENST00000317459 CCDC184Q52MB2 194 aa26.97■■□□□ 1.91
TRPT1-201ENST00000317459 KLHL34Q8N239 644 aa26.97■■□□□ 1.91
TRPT1-201ENST00000317459 MIS18AQ9NYP9 233 aa26.96■■□□□ 1.91
TRPT1-201ENST00000317459 MRS2Q9HD23 443 aa26.95■■□□□ 1.9
TRPT1-201ENST00000317459 ZBTB1Q9Y2K1 713 aa26.95■■□□□ 1.9
TRPT1-201ENST00000317459 SOS1Q07889 1333 aaPredicted RBP26.94■■□□□ 1.9
TRPT1-201ENST00000317459 SYT17Q9BSW7 474 aa26.94■■□□□ 1.9
TRPT1-201ENST00000317459 CANXP27824 592 aaKnown RBP26.93■■□□□ 1.9
TRPT1-201ENST00000317459 SNRPA1P09661 255 aaKnown RBP26.92■■□□□ 1.9
TRPT1-201ENST00000317459 NLGN1Q8N2Q7 840 aa26.92■■□□□ 1.9
TRPT1-201ENST00000317459 C4AP0C0L4 1744 aa26.9■■□□□ 1.9
TRPT1-201ENST00000317459 GYS1P13807 737 aa26.9■■□□□ 1.9
TRPT1-201ENST00000317459 SRP68Q9UHB9 627 aaKnown RBP26.9■■□□□ 1.9
TRPT1-201ENST00000317459 USP42Q9H9J4 1324 aaKnown RBP26.9■■□□□ 1.9
TRPT1-201ENST00000317459 COL15A1P39059 1388 aa26.89■■□□□ 1.9
TRPT1-201ENST00000317459 ZPR1O75312 459 aa26.89■■□□□ 1.9
TRPT1-201ENST00000317459 PRAMEF22A3QJZ6 481 aa26.88■■□□□ 1.89
TRPT1-201ENST00000317459 DCAF8L1A6NGE4 600 aa26.88■■□□□ 1.89
TRPT1-201ENST00000317459 MMP10P09238 476 aa26.88■■□□□ 1.89
TRPT1-201ENST00000317459 TSPYL4Q9UJ04 414 aa26.88■■□□□ 1.89
TRPT1-201ENST00000317459 USP16Q9Y5T5 823 aa26.88■■□□□ 1.89
TRPT1-201ENST00000317459 KDM3BQ7LBC6 1761 aa26.87■■□□□ 1.89
TRPT1-201ENST00000317459 APAF1O14727 1248 aa26.87■■□□□ 1.89
TRPT1-201ENST00000317459 A1BGP04217 495 aa26.87■■□□□ 1.89
TRPT1-201ENST00000317459 TRIM35Q9UPQ4 493 aa26.87■■□□□ 1.89
TRPT1-201ENST00000317459 NPM2Q86SE8 214 aaKnown RBP26.86■■□□□ 1.89
TRPT1-201ENST00000317459 ZNF330Q9Y3S2 320 aaPredicted RBP26.86■■□□□ 1.89
TRPT1-201ENST00000317459 A0A087WZG4 1122 aa26.85■■□□□ 1.89
TRPT1-201ENST00000317459 EIF5P55010 431 aaKnown RBP26.85■■□□□ 1.89
TRPT1-201ENST00000317459 EIF4A1P60842 406 aaKnown RBP26.85■■□□□ 1.89
TRPT1-201ENST00000317459 USPL1Q5W0Q7 1092 aa26.85■■□□□ 1.89
TRPT1-201ENST00000317459 IL6STP40189 918 aaPredicted RBP26.84■■□□□ 1.89
TRPT1-201ENST00000317459 FKBP8Q14318 412 aa26.84■■□□□ 1.89
TRPT1-201ENST00000317459 BABAM1Q9NWV8 329 aa26.84■■□□□ 1.89
TRPT1-201ENST00000317459 NARFQ9UHQ1 456 aa26.84■■□□□ 1.89
TRPT1-201ENST00000317459 LAS1LQ9Y4W2 734 aaKnown RBP26.82■■□□□ 1.88
TRPT1-201ENST00000317459 CD2APQ9Y5K6 639 aa26.82■■□□□ 1.88
TRPT1-201ENST00000317459 PARP3Q9Y6F1 533 aa26.82■■□□□ 1.88
TRPT1-201ENST00000317459 GIGYF1O75420 1035 aaPredicted RBP26.81■■□□□ 1.88
TRPT1-201ENST00000317459 NLGN2Q8NFZ4 835 aa26.81■■□□□ 1.88
TRPT1-201ENST00000317459 PIP4K2AP48426 406 aaPredicted RBP26.8■■□□□ 1.88
TRPT1-201ENST00000317459 TBC1D2BQ9UPU7 963 aa26.78■■□□□ 1.88
TRPT1-201ENST00000317459 CHL1O00533 1208 aa26.77■■□□□ 1.88
TRPT1-201ENST00000317459 LAMB4A4D0S4 1761 aa26.76■■□□□ 1.88
TRPT1-201ENST00000317459 CALD1Q05682 793 aaKnown RBP26.76■■□□□ 1.87
TRPT1-201ENST00000317459 DDR1Q08345 913 aa26.75■■□□□ 1.87
TRPT1-201ENST00000317459 BCL2L12Q9HB09 334 aa26.75■■□□□ 1.87
TRPT1-201ENST00000317459 NBPF26B4DH59 902 aa26.74■■□□□ 1.87
TRPT1-201ENST00000317459 TM4SF1P30408 202 aa26.74■■□□□ 1.87
TRPT1-201ENST00000317459 NBPF10Q6P3W6 841 aaKnown RBP26.74■■□□□ 1.87
TRPT1-201ENST00000317459 DZIP3Q86Y13 1208 aaKnown RBP26.74■■□□□ 1.87
TRPT1-201ENST00000317459 PELP1Q8IZL8 1130 aaKnown RBP26.74■■□□□ 1.87
TRPT1-201ENST00000317459 NBPF15Q8N660 670 aa26.74■■□□□ 1.87
TRPT1-201ENST00000317459 GPR162Q16538 588 aa26.73■■□□□ 1.87
TRPT1-201ENST00000317459 CFAP44Q96MT7 982 aa26.73■■□□□ 1.87
TRPT1-201ENST00000317459 SENP3-EIF4A1A0A087X0R7 540 aa26.72■■□□□ 1.87
TRPT1-201ENST00000317459 NFIXQ14938 502 aa26.72■■□□□ 1.87
TRPT1-201ENST00000317459 FAM9BQ8IZU0 186 aa26.72■■□□□ 1.87
TRPT1-201ENST00000317459 POLRMTO00411 1230 aaKnown RBP26.71■■□□□ 1.87
TRPT1-201ENST00000317459 CAMTA2O94983 1202 aa26.71■■□□□ 1.87
TRPT1-201ENST00000317459 C10orf71Q711Q0 1435 aa26.71■■□□□ 1.87
TRPT1-201ENST00000317459 SCN7AQ01118 1682 aa26.7■■□□□ 1.87
TRPT1-201ENST00000317459 EIF2S2P20042 333 aaKnown RBP26.7■■□□□ 1.86
TRPT1-201ENST00000317459 BICDL1Q6ZP65 573 aa26.7■■□□□ 1.86
TRPT1-201ENST00000317459 IFT57Q9NWB7 429 aa26.7■■□□□ 1.86
TRPT1-201ENST00000317459 GNAI1P63096 354 aa26.69■■□□□ 1.86
TRPT1-201ENST00000317459 ERBB4Q15303 1308 aa26.68■■□□□ 1.86
TRPT1-201ENST00000317459 TBC1D9BQ66K14 1250 aa26.68■■□□□ 1.86
TRPT1-201ENST00000317459 NGEFQ8N5V2 710 aa26.68■■□□□ 1.86
TRPT1-201ENST00000317459 MBIPQ9NS73 344 aa26.68■■□□□ 1.86
TRPT1-201ENST00000317459 ZNF853P0CG23 659 aa26.67■■□□□ 1.86
TRPT1-201ENST00000317459 MYL6BP14649 208 aa26.67■■□□□ 1.86
TRPT1-201ENST00000317459 CCDC27Q2M243 656 aa26.67■■□□□ 1.86
TRPT1-201ENST00000317459 KRT24Q2M2I5 525 aa26.67■■□□□ 1.86
TRPT1-201ENST00000317459 ZNF652Q9Y2D9 606 aa26.67■■□□□ 1.86
TRPT1-201ENST00000317459 SERPINB2P05120 415 aa26.66■■□□□ 1.86
TRPT1-201ENST00000317459 TGFB2P61812 414 aa26.66■■□□□ 1.86
TRPT1-201ENST00000317459 KIF13BQ9NQT8 1826 aa26.65■■□□□ 1.86
TRPT1-201ENST00000317459 BCORQ6W2J9 1755 aa26.64■■□□□ 1.86
TRPT1-201ENST00000317459 WWC1Q8IX03 1113 aa26.64■■□□□ 1.86
TRPT1-201ENST00000317459 NECTIN2Q92692 538 aa26.64■■□□□ 1.86
TRPT1-201ENST00000317459 SETDB2Q96T68 719 aa26.64■■□□□ 1.86
TRPT1-201ENST00000317459 PXDNLA1KZ92 1463 aa26.63■■□□□ 1.85
TRPT1-201ENST00000317459 NCBP3Q53F19 620 aaKnown RBP26.63■■□□□ 1.85
TRPT1-201ENST00000317459 CLEC4GQ6UXB4 293 aa26.63■■□□□ 1.85
TRPT1-201ENST00000317459 KIF6Q6ZMV9 814 aa26.63■■□□□ 1.85
TRPT1-201ENST00000317459 WWC3Q9ULE0 1092 aa26.63■■□□□ 1.85
TRPT1-201ENST00000317459 SALL2Q9Y467 1007 aaPredicted RBP26.63■■□□□ 1.85
TRPT1-201ENST00000317459 CARMIL3Q8ND23 1372 aa26.62■■□□□ 1.85
TRPT1-201ENST00000317459 HOXB7P09629 217 aa26.62■■□□□ 1.85
TRPT1-201ENST00000317459 A0A0G2JLW4 131 aa26.61■■□□□ 1.85
TRPT1-201ENST00000317459 RGL2O15211 777 aa26.61■■□□□ 1.85
TRPT1-201ENST00000317459 YBX3P16989 372 aaKnown RBP eCLIP26.61■■□□□ 1.852e-8■■□□□ 12.2
TRPT1-201ENST00000317459 DPEP1P16444 411 aa26.6■■□□□ 1.85
TRPT1-201ENST00000317459 HDGFL1Q5TGJ6 251 aa26.6■■□□□ 1.85
TRPT1-201ENST00000317459 DUSP27Q5VZP5 1158 aa26.6■■□□□ 1.85
TRPT1-201ENST00000317459 TTLL7Q6ZT98 887 aa26.6■■□□□ 1.85
TRPT1-201ENST00000317459 NPHP1O15259 732 aa26.59■■□□□ 1.85
TRPT1-201ENST00000317459 GRIN3BO60391 1043 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 393.7 ms