RNA–Protein interactions for RNA: ENST00000315891.10

SLC41A3-201, Transcript of solute carrier family 41 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC41A3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-201ENST00000315891 R3HDM1Q15032 1099 aaKnown RBP27.47■■□□□ 1.99
SLC41A3-201ENST00000315891 CDCA7LQ96GN5 454 aa27.47■■□□□ 1.99
SLC41A3-201ENST00000315891 AK7Q96M32 723 aa27.47■■□□□ 1.99
SLC41A3-201ENST00000315891 PSDA5PKW4 1024 aaPredicted RBP27.46■■□□□ 1.99
SLC41A3-201ENST00000315891 QSER1Q2KHR3 1735 aa27.46■■□□□ 1.99
SLC41A3-201ENST00000315891 GNPATO15228 680 aa27.45■■□□□ 1.99
SLC41A3-201ENST00000315891 TEX13AQ9BXU3 409 aaPredicted RBP27.45■■□□□ 1.99
SLC41A3-201ENST00000315891 STARD3NLO95772 234 aa27.45■■□□□ 1.98
SLC41A3-201ENST00000315891 INTS5Q6P9B9 1019 aaKnown RBP27.45■■□□□ 1.98
SLC41A3-201ENST00000315891 TFCP2L1Q9NZI6 479 aa27.45■■□□□ 1.98
SLC41A3-201ENST00000315891 ZBTB1Q9Y2K1 713 aa27.45■■□□□ 1.98
SLC41A3-201ENST00000315891 C8orf58Q8NAV2 365 aa27.44■■□□□ 1.98
SLC41A3-201ENST00000315891 CCDC87Q9NVE4 849 aa27.44■■□□□ 1.98
SLC41A3-201ENST00000315891 ELL2O00472 640 aaPredicted RBP27.43■■□□□ 1.98
SLC41A3-201ENST00000315891 PIP4K2AP48426 406 aaPredicted RBP27.43■■□□□ 1.98
SLC41A3-201ENST00000315891 RC3H1Q5TC82 1133 aaKnown RBP27.43■■□□□ 1.98
SLC41A3-201ENST00000315891 MYH16Q9H6N6 1097 aa27.43■■□□□ 1.98
SLC41A3-201ENST00000315891 A1BGP04217 495 aa27.42■■□□□ 1.98
SLC41A3-201ENST00000315891 DUSP27Q5VZP5 1158 aa27.42■■□□□ 1.98
SLC41A3-201ENST00000315891 TSPYL6Q8N831 410 aa27.42■■□□□ 1.98
SLC41A3-201ENST00000315891 ZBED9Q6R2W3 1325 aa27.41■■□□□ 1.98
SLC41A3-201ENST00000315891 PNPLA7Q6ZV29 1317 aa27.41■■□□□ 1.98
SLC41A3-201ENST00000315891 PHF14O94880 888 aa27.41■■□□□ 1.98
SLC41A3-201ENST00000315891 HMGB2P26583 209 aaKnown RBP27.41■■□□□ 1.98
SLC41A3-201ENST00000315891 SLFN5Q08AF3 891 aa27.41■■□□□ 1.98
SLC41A3-201ENST00000315891 PDGFDQ9GZP0 370 aaPredicted RBP27.41■■□□□ 1.98
SLC41A3-201ENST00000315891 E9PSI1 815 aa27.4■■□□□ 1.98
SLC41A3-201ENST00000315891 C4AP0C0L4 1744 aa27.4■■□□□ 1.98
SLC41A3-201ENST00000315891 CASZ1Q86V15 1759 aa27.4■■□□□ 1.98
SLC41A3-201ENST00000315891 EIF2S2P20042 333 aaKnown RBP27.4■■□□□ 1.98
SLC41A3-201ENST00000315891 CANXP27824 592 aaKnown RBP27.4■■□□□ 1.98
SLC41A3-201ENST00000315891 NECTIN2Q92692 538 aa27.4■■□□□ 1.98
SLC41A3-201ENST00000315891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.38■■□□□ 1.97
SLC41A3-201ENST00000315891 EXOSC9Q06265 439 aaKnown RBP27.38■■□□□ 1.97
SLC41A3-201ENST00000315891 RTCBQ9Y3I0 505 aaKnown RBP27.38■■□□□ 1.97
SLC41A3-201ENST00000315891 RPS6KA4O75676 772 aa27.37■■□□□ 1.97
SLC41A3-201ENST00000315891 NBPF26B4DH59 902 aa27.37■■□□□ 1.97
SLC41A3-201ENST00000315891 NBPF10Q6P3W6 841 aaKnown RBP27.37■■□□□ 1.97
SLC41A3-201ENST00000315891 NBPF15Q8N660 670 aa27.37■■□□□ 1.97
SLC41A3-201ENST00000315891 YTHDC1Q96MU7 727 aaKnown RBP27.37■■□□□ 1.97
SLC41A3-201ENST00000315891 SOS1Q07889 1333 aaPredicted RBP27.36■■□□□ 1.97
SLC41A3-201ENST00000315891 HOXB7P09629 217 aa27.36■■□□□ 1.97
SLC41A3-201ENST00000315891 SSFA2P28290 1259 aa27.35■■□□□ 1.97
SLC41A3-201ENST00000315891 COL23A1Q86Y22 540 aaPredicted RBP27.35■■□□□ 1.97
SLC41A3-201ENST00000315891 TWISTNBQ3B726 338 aaPredicted RBP27.35■■□□□ 1.97
SLC41A3-201ENST00000315891 HDGFL1Q5TGJ6 251 aa27.35■■□□□ 1.97
SLC41A3-201ENST00000315891 ZNF330Q9Y3S2 320 aaPredicted RBP27.35■■□□□ 1.97
SLC41A3-201ENST00000315891 COL15A1P39059 1388 aa27.34■■□□□ 1.97
SLC41A3-201ENST00000315891 TRMT2AQ8IZ69 625 aaKnown RBP27.34■■□□□ 1.97
SLC41A3-201ENST00000315891 ANXA1P04083 346 aa27.32■■□□□ 1.96
SLC41A3-201ENST00000315891 MSH5O43196 834 aa27.32■■□□□ 1.96
SLC41A3-201ENST00000315891 EIF5P55010 431 aaKnown RBP27.32■■□□□ 1.96
SLC41A3-201ENST00000315891 PROSER3Q2NL68 480 aa27.32■■□□□ 1.96
SLC41A3-201ENST00000315891 ARHGEF1Q92888 912 aaKnown RBP27.32■■□□□ 1.96
SLC41A3-201ENST00000315891 MYL6BP14649 208 aa27.31■■□□□ 1.96
SLC41A3-201ENST00000315891 IL6STP40189 918 aaPredicted RBP27.31■■□□□ 1.96
SLC41A3-201ENST00000315891 PDIA6Q15084 440 aa27.31■■□□□ 1.96
SLC41A3-201ENST00000315891 TRAPPC3LQ5T215 181 aa27.31■■□□□ 1.96
SLC41A3-201ENST00000315891 CHPF2Q9P2E5 772 aa27.3■■□□□ 1.96
SLC41A3-201ENST00000315891 ADRA2BP18089 450 aa27.3■■□□□ 1.96
SLC41A3-201ENST00000315891 FLAD1Q8NFF5 587 aa27.3■■□□□ 1.96
SLC41A3-201ENST00000315891 ERBB4Q15303 1308 aa27.29■■□□□ 1.96
SLC41A3-201ENST00000315891 TCERG1O14776 1098 aaKnown RBP27.28■■□□□ 1.96
SLC41A3-201ENST00000315891 VAMP4O75379 141 aa27.28■■□□□ 1.96
SLC41A3-201ENST00000315891 LRP10Q7Z4F1 713 aa27.27■■□□□ 1.96
SLC41A3-201ENST00000315891 SRP68Q9UHB9 627 aaKnown RBP27.27■■□□□ 1.96
SLC41A3-201ENST00000315891 SCN7AQ01118 1682 aa27.26■■□□□ 1.95
SLC41A3-201ENST00000315891 RFC4P35249 363 aa27.26■■□□□ 1.95
SLC41A3-201ENST00000315891 BCORQ6W2J9 1755 aa27.25■■□□□ 1.95
SLC41A3-201ENST00000315891 ZBTB7AO95365 584 aa27.25■■□□□ 1.95
SLC41A3-201ENST00000315891 DDX21Q9NR30 783 aaKnown RBP eCLIP27.25■■□□□ 1.95
SLC41A3-201ENST00000315891 TBC1D2BQ9UPU7 963 aa27.25■■□□□ 1.95
SLC41A3-201ENST00000315891 DBF4Q9UBU7 674 aaPredicted RBP27.25■■□□□ 1.95
SLC41A3-201ENST00000315891 USP42Q9H9J4 1324 aaKnown RBP27.24■■□□□ 1.95
SLC41A3-201ENST00000315891 CCDC30Q5VVM6 783 aa27.24■■□□□ 1.95
SLC41A3-201ENST00000315891 ARXQ96QS3 562 aa27.24■■□□□ 1.95
SLC41A3-201ENST00000315891 MSL1Q68DK7 614 aa27.23■■□□□ 1.95
SLC41A3-201ENST00000315891 NPM2Q86SE8 214 aaKnown RBP27.23■■□□□ 1.95
SLC41A3-201ENST00000315891 SRCAPQ6ZRS2 3230 aa27.23■■□□□ 1.95
SLC41A3-201ENST00000315891 DZIP3Q86Y13 1208 aaKnown RBP27.22■■□□□ 1.95
SLC41A3-201ENST00000315891 USPL1Q5W0Q7 1092 aa27.22■■□□□ 1.95
SLC41A3-201ENST00000315891 TTLL7Q6ZT98 887 aa27.22■■□□□ 1.95
SLC41A3-201ENST00000315891 NARFQ9UHQ1 456 aa27.21■■□□□ 1.95
SLC41A3-201ENST00000315891 A0A087WZG4 1122 aa27.2■■□□□ 1.95
SLC41A3-201ENST00000315891 ZPR1O75312 459 aa27.2■■□□□ 1.94
SLC41A3-201ENST00000315891 GYS1P13807 737 aa27.2■■□□□ 1.94
SLC41A3-201ENST00000315891 SLC16A10Q8TF71 515 aa27.2■■□□□ 1.94
SLC41A3-201ENST00000315891 ATF5Q9Y2D1 282 aaPredicted RBP27.2■■□□□ 1.94
SLC41A3-201ENST00000315891 COL24A1Q17RW2 1714 aa27.19■■□□□ 1.94
SLC41A3-201ENST00000315891 AIMP1Q12904 312 aaKnown RBP27.19■■□□□ 1.94
SLC41A3-201ENST00000315891 XAGE3Q8WTP9 111 aa27.19■■□□□ 1.94
SLC41A3-201ENST00000315891 STK31Q9BXU1 1019 aa27.19■■□□□ 1.94
SLC41A3-201ENST00000315891 MTFR1LQ9H019 292 aa27.19■■□□□ 1.94
SLC41A3-201ENST00000315891 PHAXQ9H814 394 aaKnown RBP27.19■■□□□ 1.94
SLC41A3-201ENST00000315891 CACNA1FO60840 1977 aa27.18■■□□□ 1.94
SLC41A3-201ENST00000315891 CAMTA2O94983 1202 aa27.18■■□□□ 1.94
SLC41A3-201ENST00000315891 COPS6Q7L5N1 327 aa27.18■■□□□ 1.94
SLC41A3-201ENST00000315891 BCL2L12Q9HB09 334 aa27.18■■□□□ 1.94
SLC41A3-201ENST00000315891 HYPKQ9NX55 129 aa27.17■■□□□ 1.94
SLC41A3-201ENST00000315891 FKBP8Q14318 412 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms