RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 FCHSD2O94868 740 aa5.6□□□□□ -1.51
POLR2B-201ENST00000314595 LBX1P52954 281 aa5.6□□□□□ -1.51
POLR2B-201ENST00000314595 BRPF1P55201 1214 aaPredicted RBP5.6□□□□□ -1.51
POLR2B-201ENST00000314595 SIK1P57059 783 aa5.6□□□□□ -1.51
POLR2B-201ENST00000314595 DUOX1Q9NRD9 1551 aa5.6□□□□□ -1.51
POLR2B-201ENST00000314595 USP42Q9H9J4 1324 aaKnown RBP5.6□□□□□ -1.51
POLR2B-201ENST00000314595 DDX60Q8IY21 1712 aaKnown RBP5.6□□□□□ -1.51
POLR2B-201ENST00000314595 SOGA3Q5TF21 947 aa5.6□□□□□ -1.51
POLR2B-201ENST00000314595 WDR33Q9C0J8 1336 aaKnown RBP5.6□□□□□ -1.51
POLR2B-201ENST00000314595 BCS1LQ9Y276 419 aa5.6□□□□□ -1.51
POLR2B-201ENST00000314595 POLRMTO00411 1230 aaKnown RBP5.59□□□□□ -1.51
POLR2B-201ENST00000314595 ECE1P42892 770 aa5.59□□□□□ -1.51
POLR2B-201ENST00000314595 SRPK2P78362 688 aaKnown RBP5.59□□□□□ -1.51
POLR2B-201ENST00000314595 CABP2Q9NPB3 220 aa5.59□□□□□ -1.51
POLR2B-201ENST00000314595 PARP3Q9Y6F1 533 aa5.59□□□□□ -1.51
POLR2B-201ENST00000314595 A0A0G2JLW4 131 aa5.59□□□□□ -1.52
POLR2B-201ENST00000314595 ZNF609O15014 1411 aa5.59□□□□□ -1.52
POLR2B-201ENST00000314595 FLT4P35916 1363 aa5.59□□□□□ -1.52
POLR2B-201ENST00000314595 REM2Q8IYK8 340 aaPredicted RBP5.59□□□□□ -1.52
POLR2B-201ENST00000314595 FAM43AQ8N2R8 423 aa5.59□□□□□ -1.52
POLR2B-201ENST00000314595 DAXXQ9UER7 740 aaPredicted RBP5.59□□□□□ -1.52
POLR2B-201ENST00000314595 PITPNM2Q9BZ72 1349 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 ERVV-2B6SEH9 535 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 NFKBIEO00221 500 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 ITGAEP38570 1179 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 ITPK1Q13572 414 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 DCAF11Q8TEB1 546 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 TRAPPC3LQ5T215 181 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 DPY19L2Q6NUT2 758 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 PIGBQ92521 554 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 TLL2Q9Y6L7 1015 aa5.58□□□□□ -1.52
POLR2B-201ENST00000314595 ZNF646O15015 1829 aaPredicted RBP5.58□□□□□ -1.52
POLR2B-201ENST00000314595 PNMA8AQ86V59 439 aaPredicted RBP5.58□□□□□ -1.52
POLR2B-201ENST00000314595 CYP27B1O15528 508 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 PLEKHG5O94827 1062 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 MCOLN1Q9GZU1 580 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 PGAP2Q9UHJ9 254 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 RTCBQ9Y3I0 505 aaKnown RBP5.57□□□□□ -1.52
POLR2B-201ENST00000314595 PKN2Q16513 984 aaKnown RBP5.57□□□□□ -1.52
POLR2B-201ENST00000314595 GRIPAP1Q4V328 841 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 RSPH6AQ9H0K4 717 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 TAF1DQ9H5J8 278 aaPredicted RBP5.57□□□□□ -1.52
POLR2B-201ENST00000314595 CDHR2Q9BYE9 1310 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 TATP17735 454 aaPredicted RBP5.57□□□□□ -1.52
POLR2B-201ENST00000314595 DDR1Q08345 913 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 DEFB115Q30KQ5 88 aa5.57□□□□□ -1.52
POLR2B-201ENST00000314595 SSC5DA1L4H1 1573 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 LRRC37AA6NMS7 1700 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 STYK1Q6J9G0 422 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 ARHGEF1Q92888 912 aaKnown RBP5.56□□□□□ -1.52
POLR2B-201ENST00000314595 CFHR5Q9BXR6 569 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 AKAP11Q9UKA4 1901 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 SLX4Q8IY92 1834 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 PKNOX2Q96KN3 472 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 ATG3Q9NT62 314 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 KLRG2A4D1S0 409 aaPredicted RBP5.56□□□□□ -1.52
POLR2B-201ENST00000314595 DDX54Q8TDD1 881 aaKnown RBP5.56□□□□□ -1.52
POLR2B-201ENST00000314595 VPS33BQ9H267 617 aa5.56□□□□□ -1.52
POLR2B-201ENST00000314595 CACNA1SQ13698 1873 aa5.55□□□□□ -1.52
POLR2B-201ENST00000314595 GNPATO15228 680 aa5.55□□□□□ -1.52
POLR2B-201ENST00000314595 MS4A1P11836 297 aa5.55□□□□□ -1.52
POLR2B-201ENST00000314595 TTLL6Q8N841 843 aa5.55□□□□□ -1.52
POLR2B-201ENST00000314595 SOS1Q07889 1333 aaPredicted RBP5.55□□□□□ -1.52
POLR2B-201ENST00000314595 KCNQ4P56696 695 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 NBPF6Q5VWK0 638 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 NBPF4Q96M43 638 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 SPG7Q9UQ90 795 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 HDGFL2Q7Z4V5 671 aaPredicted RBP5.54□□□□□ -1.52
POLR2B-201ENST00000314595 C7orf43Q8WVR3 580 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 RAPGEF4Q8WZA2 1011 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 TERF2IPQ9NYB0 399 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 MKRN1Q9UHC7 482 aaKnown RBP5.54□□□□□ -1.52
POLR2B-201ENST00000314595 PSME4Q14997 1843 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 FZD9O00144 591 aa5.54□□□□□ -1.52
POLR2B-201ENST00000314595 HSP90AB1P08238 724 aaKnown RBP5.54□□□□□ -1.52
POLR2B-201ENST00000314595 IBTKQ9P2D0 1353 aaPredicted RBP5.54□□□□□ -1.52
POLR2B-201ENST00000314595 NEFLP07196 543 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 RASSF7Q02833 373 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 NME9Q86XW9 330 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 SLC4A9Q96Q91 983 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 HABP4Q5JVS0 413 aaKnown RBP5.53□□□□□ -1.52
POLR2B-201ENST00000314595 NBPF15Q8N660 670 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 BACH2Q9BYV9 841 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 LAMB4A4D0S4 1761 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 ANKRD36CQ5JPF3 1778 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 PHKG2P15735 406 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 DDX10Q13206 875 aaKnown RBP5.53□□□□□ -1.52
POLR2B-201ENST00000314595 VSIG10Q8N0Z9 540 aa5.53□□□□□ -1.52
POLR2B-201ENST00000314595 DDX21Q9NR30 783 aaKnown RBP eCLIP5.53□□□□□ -1.52
POLR2B-201ENST00000314595 PAPPA2Q9BXP8 1791 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 NBPF1Q3BBV0 1214 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 USP50Q70EL3 339 aaPredicted RBP5.52□□□□□ -1.53
POLR2B-201ENST00000314595 CCDC85CA6NKD9 419 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 CAPNS2Q96L46 248 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 BRIP1Q9BX63 1249 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 TMOD3Q9NYL9 352 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 NARFQ9UHQ1 456 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 HACL1Q9UJ83 578 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 ANP32CO43423 234 aa5.52□□□□□ -1.53
POLR2B-201ENST00000314595 RFC4P35249 363 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms