RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 BTBD11A6QL63 1104 aa15.85■□□□□ 0.13
CLCN6-201ENST00000312413 NF2P35240 595 aa15.85■□□□□ 0.13
CLCN6-201ENST00000312413 STX6O43752 255 aa15.84■□□□□ 0.13
CLCN6-201ENST00000312413 CCDC150Q8NCX0 1101 aa15.84■□□□□ 0.13
CLCN6-201ENST00000312413 SPECC1LQ69YQ0 1117 aa15.84■□□□□ 0.13
CLCN6-201ENST00000312413 DDX54Q8TDD1 881 aaKnown RBP15.84■□□□□ 0.13
CLCN6-201ENST00000312413 NEBLO76041 1014 aa15.84■□□□□ 0.13
CLCN6-201ENST00000312413 GIGYF2Q6Y7W6 1299 aaKnown RBP15.84■□□□□ 0.13
CLCN6-201ENST00000312413 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
CLCN6-201ENST00000312413 USP5P45974 858 aa15.84■□□□□ 0.13
CLCN6-201ENST00000312413 MNAT1P51948 309 aa15.84■□□□□ 0.13
CLCN6-201ENST00000312413 UBE2HP62256 183 aa15.84■□□□□ 0.13
CLCN6-201ENST00000312413 STAMBPO95630 424 aa15.83■□□□□ 0.13
CLCN6-201ENST00000312413 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.13
CLCN6-201ENST00000312413 BOLA2Q9H3K6 86 aa15.83■□□□□ 0.13
CLCN6-201ENST00000312413 PLEKHH2Q8IVE3 1493 aa15.83■□□□□ 0.13
CLCN6-201ENST00000312413 CCDC171Q6TFL3 1326 aa15.83■□□□□ 0.13
CLCN6-201ENST00000312413 TXNDC2Q86VQ3 553 aa15.83■□□□□ 0.13
CLCN6-201ENST00000312413 MEX3CQ5U5Q3 659 aaKnown RBP15.83■□□□□ 0.12
CLCN6-201ENST00000312413 GNG11P61952 73 aa15.83■□□□□ 0.12
CLCN6-201ENST00000312413 UBE4AQ14139 1066 aa15.83■□□□□ 0.12
CLCN6-201ENST00000312413 ZSCAN23Q3MJ62 389 aa15.83■□□□□ 0.12
CLCN6-201ENST00000312413 DUSP27Q5VZP5 1158 aa15.83■□□□□ 0.12
CLCN6-201ENST00000312413 DNAAF4Q8WXU2 420 aa15.83■□□□□ 0.12
CLCN6-201ENST00000312413 TFIP11Q9UBB9 837 aaKnown RBP15.83■□□□□ 0.12
CLCN6-201ENST00000312413 RBM27Q9P2N5 1060 aaKnown RBP15.82■□□□□ 0.12
CLCN6-201ENST00000312413 BIN1O00499 593 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 MATR3P43243 847 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLCN6-201ENST00000312413 GJB2P29033 226 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 LRSAM1Q6UWE0 723 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 LRPPRCP42704 1394 aaKnown RBP15.82■□□□□ 0.12
CLCN6-201ENST00000312413 BMP2KLQ5H9B9 411 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 HOOK3Q86VS8 718 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 AFAP1Q8N556 730 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 CCDC12Q8WUD4 166 aaPredicted RBP15.82■□□□□ 0.12
CLCN6-201ENST00000312413 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 AKAP2Q9Y2D5 859 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 ATAD2Q6PL18 1390 aa15.82■□□□□ 0.12
CLCN6-201ENST00000312413 DHX29Q7Z478 1369 aaKnown RBP15.82■□□□□ 0.12
CLCN6-201ENST00000312413 ABCC11Q96J66 1382 aa15.81■□□□□ 0.12
CLCN6-201ENST00000312413 KIF20AO95235 890 aa15.81■□□□□ 0.12
CLCN6-201ENST00000312413 ANAPC15P60006 121 aa15.81■□□□□ 0.12
CLCN6-201ENST00000312413 MAATS1Q7Z4T9 603 aa15.81■□□□□ 0.12
CLCN6-201ENST00000312413 RRS1Q15050 365 aaKnown RBP15.81■□□□□ 0.12
CLCN6-201ENST00000312413 RAB34Q9BZG1 259 aa15.81■□□□□ 0.12
CLCN6-201ENST00000312413 SEC63Q9UGP8 760 aaKnown RBP15.81■□□□□ 0.12
CLCN6-201ENST00000312413 HCLS1P14317 486 aaPredicted RBP15.81■□□□□ 0.12
CLCN6-201ENST00000312413 LARP1Q6PKG0 1096 aaKnown RBP15.81■□□□□ 0.12
CLCN6-201ENST00000312413 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
CLCN6-201ENST00000312413 TBC1D9Q6ZT07 1266 aa15.8■□□□□ 0.12
CLCN6-201ENST00000312413 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLCN6-201ENST00000312413 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
CLCN6-201ENST00000312413 NOLC1Q14978 699 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLCN6-201ENST00000312413 CTCFLQ8NI51 663 aaPredicted RBP15.8■□□□□ 0.12
CLCN6-201ENST00000312413 CTNNBL1Q8WYA6 563 aaPredicted RBP15.8■□□□□ 0.12
CLCN6-201ENST00000312413 MTIF2P46199 727 aaKnown RBP15.8■□□□□ 0.12
CLCN6-201ENST00000312413 CEP63Q96MT8 703 aa15.8■□□□□ 0.12
CLCN6-201ENST00000312413 NAPBQ9H115 298 aa15.8■□□□□ 0.12
CLCN6-201ENST00000312413 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
CLCN6-201ENST00000312413 CEP112Q8N8E3 955 aa15.8■□□□□ 0.12
CLCN6-201ENST00000312413 ZSWIM4Q9H7M6 989 aa15.8■□□□□ 0.12
CLCN6-201ENST00000312413 ZNF287Q9HBT7 754 aa15.8■□□□□ 0.12
CLCN6-201ENST00000312413 ABCF2Q9UG63 623 aa15.8■□□□□ 0.12
CLCN6-201ENST00000312413 RTEL1-TNFRSF6BF6WH68 1400 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 GNAT3A8MTJ3 354 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 IVLP07476 585 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 IFIT1P09914 478 aaKnown RBP15.79■□□□□ 0.12
CLCN6-201ENST00000312413 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
CLCN6-201ENST00000312413 METTL24Q5JXM2 366 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 ARFGAP3Q9NP61 516 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 NSD3Q9BZ95 1437 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 TMCO5BA8MYB1 307 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 EHBP1Q8NDI1 1231 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 STRN4Q9NRL3 753 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 SLC12A7Q9Y666 1083 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 ARHGAP5Q13017 1502 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 GOLGA8BA8MQT2 603 aa15.79■□□□□ 0.12
CLCN6-201ENST00000312413 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
CLCN6-201ENST00000312413 ZSCAN29Q8IWY8 852 aaPredicted RBP15.78■□□□□ 0.12
CLCN6-201ENST00000312413 JADE2Q9NQC1 790 aa15.78■□□□□ 0.12
CLCN6-201ENST00000312413 MACROD2A1Z1Q3 448 aa15.78■□□□□ 0.12
CLCN6-201ENST00000312413 MINDY4BA8MYZ0 360 aa15.78■□□□□ 0.12
CLCN6-201ENST00000312413 XRCC6P12956 609 aaKnown RBP eCLIP15.78■□□□□ 0.12
CLCN6-201ENST00000312413 SSRP1Q08945 709 aaKnown RBP15.78■□□□□ 0.12
CLCN6-201ENST00000312413 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
CLCN6-201ENST00000312413 TMEM266Q2M3C6 531 aa15.78■□□□□ 0.12
CLCN6-201ENST00000312413 CCDC85AQ96PX6 553 aaPredicted RBP15.78■□□□□ 0.12
CLCN6-201ENST00000312413 ZNF213O14771 459 aa15.77■□□□□ 0.12
CLCN6-201ENST00000312413 RBM5P52756 815 aaKnown RBP eCLIP15.77■□□□□ 0.128e-6■■■■□ 20.7
CLCN6-201ENST00000312413 HSPA4P34932 840 aa15.77■□□□□ 0.12
CLCN6-201ENST00000312413 GTF2A1P52655 376 aaPredicted RBP15.77■□□□□ 0.12
CLCN6-201ENST00000312413 CCT2P78371 535 aaKnown RBP15.77■□□□□ 0.12
CLCN6-201ENST00000312413 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
CLCN6-201ENST00000312413 HSF2BPO75031 334 aa15.77■□□□□ 0.11
CLCN6-201ENST00000312413 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.11
CLCN6-201ENST00000312413 LARP6Q9BRS8 491 aaKnown RBP15.77■□□□□ 0.11
CLCN6-201ENST00000312413 GOLGA8AA7E2F4 631 aa15.77■□□□□ 0.11
CLCN6-201ENST00000312413 MPHOSPH10O00566 681 aaKnown RBP15.77■□□□□ 0.11
CLCN6-201ENST00000312413 LIG1P18858 919 aa15.77■□□□□ 0.11
CLCN6-201ENST00000312413 MIS18AQ9NYP9 233 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms