RNA–Protein interactions for RNA: ENST00000308941.9

PHYHD1-201, Transcript of phytanoyl-CoA dioxygenase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PHYHD1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHYHD1-201ENST00000308941 ARXQ96QS3 562 aa22.52■■□□□ 1.2
PHYHD1-201ENST00000308941 TRIM35Q9UPQ4 493 aa22.52■■□□□ 1.2
PHYHD1-201ENST00000308941 UTRNP46939 3433 aa22.52■■□□□ 1.2
PHYHD1-201ENST00000308941 TRAPPC3LQ5T215 181 aa22.51■■□□□ 1.19
PHYHD1-201ENST00000308941 SRP68Q9UHB9 627 aaKnown RBP22.51■■□□□ 1.19
PHYHD1-201ENST00000308941 APAF1O14727 1248 aa22.5■■□□□ 1.19
PHYHD1-201ENST00000308941 HMGB2P26583 209 aaKnown RBP22.5■■□□□ 1.19
PHYHD1-201ENST00000308941 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
PHYHD1-201ENST00000308941 FHDC1Q9C0D6 1143 aaPredicted RBP22.5■■□□□ 1.19
PHYHD1-201ENST00000308941 CANXP27824 592 aaKnown RBP22.5■■□□□ 1.19
PHYHD1-201ENST00000308941 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
PHYHD1-201ENST00000308941 USP16Q9Y5T5 823 aa22.5■■□□□ 1.19
PHYHD1-201ENST00000308941 SOS1Q07889 1333 aaPredicted RBP22.49■■□□□ 1.19
PHYHD1-201ENST00000308941 KLHL34Q8N239 644 aa22.49■■□□□ 1.19
PHYHD1-201ENST00000308941 A1BGP04217 495 aa22.48■■□□□ 1.19
PHYHD1-201ENST00000308941 POLD1P28340 1107 aa22.48■■□□□ 1.19
PHYHD1-201ENST00000308941 RFC4P35249 363 aa22.47■■□□□ 1.19
PHYHD1-201ENST00000308941 LAMB4A4D0S4 1761 aa22.46■■□□□ 1.19
PHYHD1-201ENST00000308941 STARD3NLO95772 234 aa22.46■■□□□ 1.19
PHYHD1-201ENST00000308941 GYS1P13807 737 aa22.46■■□□□ 1.19
PHYHD1-201ENST00000308941 COL15A1P39059 1388 aa22.45■■□□□ 1.18
PHYHD1-201ENST00000308941 ADRA2BP18089 450 aa22.45■■□□□ 1.18
PHYHD1-201ENST00000308941 TSPYL4Q9UJ04 414 aa22.45■■□□□ 1.18
PHYHD1-201ENST00000308941 ZNF330Q9Y3S2 320 aaPredicted RBP22.45■■□□□ 1.18
PHYHD1-201ENST00000308941 EIF4A1P60842 406 aaKnown RBP22.44■■□□□ 1.18
PHYHD1-201ENST00000308941 LMOD3Q0VAK6 560 aa22.44■■□□□ 1.18
PHYHD1-201ENST00000308941 SYT17Q9BSW7 474 aa22.44■■□□□ 1.18
PHYHD1-201ENST00000308941 USP42Q9H9J4 1324 aaKnown RBP22.43■■□□□ 1.18
PHYHD1-201ENST00000308941 SNRPA1P09661 255 aaKnown RBP22.43■■□□□ 1.18
PHYHD1-201ENST00000308941 LAS1LQ9Y4W2 734 aaKnown RBP22.43■■□□□ 1.18
PHYHD1-201ENST00000308941 FKBP8Q14318 412 aa22.42■■□□□ 1.18
PHYHD1-201ENST00000308941 MMP10P09238 476 aa22.42■■□□□ 1.18
PHYHD1-201ENST00000308941 USPL1Q5W0Q7 1092 aa22.42■■□□□ 1.18
PHYHD1-201ENST00000308941 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
PHYHD1-201ENST00000308941 TEX13AQ9BXU3 409 aaPredicted RBP22.42■■□□□ 1.18
PHYHD1-201ENST00000308941 EIF5P55010 431 aaKnown RBP22.41■■□□□ 1.18
PHYHD1-201ENST00000308941 KRT24Q2M2I5 525 aa22.41■■□□□ 1.18
PHYHD1-201ENST00000308941 FAM9BQ8IZU0 186 aa22.41■■□□□ 1.18
PHYHD1-201ENST00000308941 NBPF26B4DH59 902 aa22.39■■□□□ 1.18
PHYHD1-201ENST00000308941 GIGYF1O75420 1035 aaPredicted RBP22.39■■□□□ 1.18
PHYHD1-201ENST00000308941 NBPF10Q6P3W6 841 aaKnown RBP22.39■■□□□ 1.18
PHYHD1-201ENST00000308941 NBPF15Q8N660 670 aa22.39■■□□□ 1.18
PHYHD1-201ENST00000308941 BCL2L12Q9HB09 334 aa22.39■■□□□ 1.18
PHYHD1-201ENST00000308941 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
PHYHD1-201ENST00000308941 SCN7AQ01118 1682 aa22.38■■□□□ 1.17
PHYHD1-201ENST00000308941 CHL1O00533 1208 aa22.37■■□□□ 1.17
PHYHD1-201ENST00000308941 ZPR1O75312 459 aa22.37■■□□□ 1.17
PHYHD1-201ENST00000308941 NLGN1Q8N2Q7 840 aa22.37■■□□□ 1.17
PHYHD1-201ENST00000308941 NARFQ9UHQ1 456 aa22.37■■□□□ 1.17
PHYHD1-201ENST00000308941 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
PHYHD1-201ENST00000308941 DDR1Q08345 913 aa22.36■■□□□ 1.17
PHYHD1-201ENST00000308941 BCORQ6W2J9 1755 aa22.35■■□□□ 1.17
PHYHD1-201ENST00000308941 CENPBP07199 599 aaPredicted RBP22.35■■□□□ 1.17
PHYHD1-201ENST00000308941 IL6STP40189 918 aaPredicted RBP22.35■■□□□ 1.17
PHYHD1-201ENST00000308941 AFDNP55196 1824 aaKnown RBP22.34■■□□□ 1.17
PHYHD1-201ENST00000308941 NECTIN2Q92692 538 aa22.33■■□□□ 1.17
PHYHD1-201ENST00000308941 NGEFQ8N5V2 710 aa22.33■■□□□ 1.16
PHYHD1-201ENST00000308941 MBIPQ9NS73 344 aa22.33■■□□□ 1.16
PHYHD1-201ENST00000308941 WWC3Q9ULE0 1092 aa22.33■■□□□ 1.16
PHYHD1-201ENST00000308941 EIF2S2P20042 333 aaKnown RBP22.32■■□□□ 1.16
PHYHD1-201ENST00000308941 NFIXQ14938 502 aa22.32■■□□□ 1.16
PHYHD1-201ENST00000308941 BABAM1Q9NWV8 329 aa22.32■■□□□ 1.16
PHYHD1-201ENST00000308941 KIAA1551Q9HCM1 1747 aa22.32■■□□□ 1.16
PHYHD1-201ENST00000308941 N4BP2Q86UW6 1770 aaPredicted RBP22.32■■□□□ 1.16
PHYHD1-201ENST00000308941 KIF13BQ9NQT8 1826 aa22.32■■□□□ 1.16
PHYHD1-201ENST00000308941 CAMTA2O94983 1202 aa22.31■■□□□ 1.16
PHYHD1-201ENST00000308941 ANXA1P04083 346 aa22.31■■□□□ 1.16
PHYHD1-201ENST00000308941 ZNF853P0CG23 659 aa22.31■■□□□ 1.16
PHYHD1-201ENST00000308941 MYL6BP14649 208 aa22.31■■□□□ 1.16
PHYHD1-201ENST00000308941 TM4SF1P30408 202 aa22.31■■□□□ 1.16
PHYHD1-201ENST00000308941 BICDL1Q6ZP65 573 aa22.31■■□□□ 1.16
PHYHD1-201ENST00000308941 DZIP3Q86Y13 1208 aaKnown RBP22.31■■□□□ 1.16
PHYHD1-201ENST00000308941 CFAP44Q96MT7 982 aa22.31■■□□□ 1.16
PHYHD1-201ENST00000308941 POLRMTO00411 1230 aaKnown RBP22.3■■□□□ 1.16
PHYHD1-201ENST00000308941 PARP3Q9Y6F1 533 aa22.3■■□□□ 1.16
PHYHD1-201ENST00000308941 A0A087WZG4 1122 aa22.29■■□□□ 1.16
PHYHD1-201ENST00000308941 PROSER3Q2NL68 480 aa22.29■■□□□ 1.16
PHYHD1-201ENST00000308941 TBC1D9BQ66K14 1250 aa22.29■■□□□ 1.16
PHYHD1-201ENST00000308941 WWC1Q8IX03 1113 aa22.29■■□□□ 1.16
PHYHD1-201ENST00000308941 C10orf71Q711Q0 1435 aa22.29■■□□□ 1.16
PHYHD1-201ENST00000308941 TSR2Q969E8 191 aaKnown RBP22.28■■□□□ 1.16
PHYHD1-201ENST00000308941 IFT57Q9NWB7 429 aa22.28■■□□□ 1.16
PHYHD1-201ENST00000308941 CD2APQ9Y5K6 639 aa22.28■■□□□ 1.16
PHYHD1-201ENST00000308941 NRXN2Q9P2S2 1712 aa22.27■■□□□ 1.16
PHYHD1-201ENST00000308941 PDIA6Q15084 440 aa22.27■■□□□ 1.16
PHYHD1-201ENST00000308941 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
PHYHD1-201ENST00000308941 TTLL7Q6ZT98 887 aa22.27■■□□□ 1.16
PHYHD1-201ENST00000308941 NPM2Q86SE8 214 aaKnown RBP22.26■■□□□ 1.15
PHYHD1-201ENST00000308941 ELL2O00472 640 aaPredicted RBP22.25■■□□□ 1.15
PHYHD1-201ENST00000308941 HLFQ16534 295 aa22.25■■□□□ 1.15
PHYHD1-201ENST00000308941 CCDC27Q2M243 656 aa22.25■■□□□ 1.15
PHYHD1-201ENST00000308941 GNAI1P63096 354 aa22.25■■□□□ 1.15
PHYHD1-201ENST00000308941 LRP10Q7Z4F1 713 aa22.25■■□□□ 1.15
PHYHD1-201ENST00000308941 MIER1Q8N108 512 aa22.25■■□□□ 1.15
PHYHD1-201ENST00000308941 CCDC24Q8N4L8 307 aa22.25■■□□□ 1.15
PHYHD1-201ENST00000308941 PXDNLA1KZ92 1463 aa22.25■■□□□ 1.15
PHYHD1-201ENST00000308941 CARMIL3Q8ND23 1372 aa22.24■■□□□ 1.15
PHYHD1-201ENST00000308941 NUP98P52948 1817 aa22.24■■□□□ 1.15
PHYHD1-201ENST00000308941 YBX3P16989 372 aaKnown RBP eCLIP22.24■■□□□ 1.15
PHYHD1-201ENST00000308941 DUSP27Q5VZP5 1158 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms