RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FAM182BQ5T319 152 aa15□□□□□ -0.01
TRIM40-205ENST00000307859 CARD10Q9BWT7 1032 aa15□□□□□ -0.01
TRIM40-205ENST00000307859 CHMP4AQ9BY43 222 aa15□□□□□ -0.01
TRIM40-205ENST00000307859 CYP27B1O15528 508 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 APBA3O96018 575 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 HDGFL1Q5TGJ6 251 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 SMC5Q8IY18 1101 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 BACH2Q9BYV9 841 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 NRAPQ86VF7 1730 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 HSP90AB1P08238 724 aaKnown RBP14.99□□□□□ -0.01
TRIM40-205ENST00000307859 PDE4AP27815 886 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 FLIIQ13045 1269 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 TOM1L2Q6ZVM7 507 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 SLC52A2Q9HAB3 445 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
TRIM40-205ENST00000307859 THSD7AQ9UPZ6 1657 aa14.98□□□□□ -0.01
TRIM40-205ENST00000307859 ATP10DQ9P241 1426 aa14.98□□□□□ -0.01
TRIM40-205ENST00000307859 TRIM37O94972 964 aa14.98□□□□□ -0.01
TRIM40-205ENST00000307859 RGS3P49796 1198 aa14.98□□□□□ -0.01
TRIM40-205ENST00000307859 DCAF5Q96JK2 942 aa14.98□□□□□ -0.01
TRIM40-205ENST00000307859 BTG4Q9NY30 223 aa14.98□□□□□ -0.01
TRIM40-205ENST00000307859 TOGARAM1Q9Y4F4 1720 aa14.97□□□□□ -0.01
TRIM40-205ENST00000307859 RREB1Q92766 1687 aa14.97□□□□□ -0.01
TRIM40-205ENST00000307859 CCT4P50991 539 aaKnown RBP14.97□□□□□ -0.01
TRIM40-205ENST00000307859 PCDH11XQ9BZA7 1347 aa14.96□□□□□ -0.01
TRIM40-205ENST00000307859 PCDH11YQ9BZA8 1340 aa14.96□□□□□ -0.01
TRIM40-205ENST00000307859 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
TRIM40-205ENST00000307859 LARP1Q6PKG0 1096 aaKnown RBP14.95□□□□□ -0.02
TRIM40-205ENST00000307859 NECTIN2Q92692 538 aa14.95□□□□□ -0.02
TRIM40-205ENST00000307859 C1orf115Q9H7X2 142 aa14.95□□□□□ -0.02
TRIM40-205ENST00000307859 ITGB4P16144 1822 aa14.95□□□□□ -0.02
TRIM40-205ENST00000307859 IL2RBP14784 551 aa14.95□□□□□ -0.02
TRIM40-205ENST00000307859 FKBP5Q13451 457 aaPredicted RBP14.95□□□□□ -0.02
TRIM40-205ENST00000307859 SIRT2Q8IXJ6 389 aa14.95□□□□□ -0.02
TRIM40-205ENST00000307859 NUP188Q5SRE5 1749 aa14.94□□□□□ -0.02
TRIM40-205ENST00000307859 F6X3S4 739 aa14.94□□□□□ -0.02
TRIM40-205ENST00000307859 EVA1CP58658 441 aa14.94□□□□□ -0.02
TRIM40-205ENST00000307859 ZNF790Q6PG37 636 aa14.94□□□□□ -0.02
TRIM40-205ENST00000307859 ZCRB1Q8TBF4 217 aaKnown RBP14.94□□□□□ -0.02
TRIM40-205ENST00000307859 STRN4Q9NRL3 753 aa14.94□□□□□ -0.02
TRIM40-205ENST00000307859 EIF2S2P20042 333 aaKnown RBP14.93□□□□□ -0.02
TRIM40-205ENST00000307859 NKX1-1Q15270 411 aaPredicted RBP14.93□□□□□ -0.02
TRIM40-205ENST00000307859 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
TRIM40-205ENST00000307859 GCC1Q96CN9 775 aa14.93□□□□□ -0.02
TRIM40-205ENST00000307859 CHPF2Q9P2E5 772 aa14.93□□□□□ -0.02
TRIM40-205ENST00000307859 C8orf34Q49A92 452 aa14.92□□□□□ -0.02
TRIM40-205ENST00000307859 NFATC2IPQ8NCF5 419 aa14.92□□□□□ -0.02
TRIM40-205ENST00000307859 MEIS3Q99687 375 aa14.92□□□□□ -0.02
TRIM40-205ENST00000307859 DBF4Q9UBU7 674 aaPredicted RBP14.92□□□□□ -0.02
TRIM40-205ENST00000307859 NUCB1Q02818 461 aa14.92□□□□□ -0.02
TRIM40-205ENST00000307859 SLC4A10Q6U841 1118 aa14.92□□□□□ -0.02
TRIM40-205ENST00000307859 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
TRIM40-205ENST00000307859 RPAP2Q8IXW5 612 aaPredicted RBP14.91□□□□□ -0.02
TRIM40-205ENST00000307859 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
TRIM40-205ENST00000307859 SPATA31A1Q5TZJ5 1347 aa14.9□□□□□ -0.02
TRIM40-205ENST00000307859 SLC39A6Q13433 755 aa14.9□□□□□ -0.02
TRIM40-205ENST00000307859 CEP85Q6P2H3 762 aa14.9□□□□□ -0.02
TRIM40-205ENST00000307859 ERVV-2B6SEH9 535 aa14.89□□□□□ -0.03
TRIM40-205ENST00000307859 CABP4P57796 275 aa14.89□□□□□ -0.03
TRIM40-205ENST00000307859 KCPQ6ZWJ8 1503 aa14.89□□□□□ -0.03
TRIM40-205ENST00000307859 ADCY9O60503 1353 aa14.89□□□□□ -0.03
TRIM40-205ENST00000307859 ARFGEF2Q9Y6D5 1785 aa14.88□□□□□ -0.03
TRIM40-205ENST00000307859 PRAMEF22A3QJZ6 481 aa14.88□□□□□ -0.03
TRIM40-205ENST00000307859 GNAI3P08754 354 aa14.88□□□□□ -0.03
TRIM40-205ENST00000307859 CHD1LQ86WJ1 897 aa14.88□□□□□ -0.03
TRIM40-205ENST00000307859 ZNF496Q96IT1 587 aaPredicted RBP14.88□□□□□ -0.03
TRIM40-205ENST00000307859 DCTPP1Q9H773 170 aa14.88□□□□□ -0.03
TRIM40-205ENST00000307859 DDX21Q9NR30 783 aaKnown RBP eCLIP14.88□□□□□ -0.03
TRIM40-205ENST00000307859 HYPKQ9NX55 129 aa14.88□□□□□ -0.03
TRIM40-205ENST00000307859 TNS2Q63HR2 1409 aa14.88□□□□□ -0.03
TRIM40-205ENST00000307859 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
TRIM40-205ENST00000307859 PROSER3Q2NL68 480 aa14.87□□□□□ -0.03
TRIM40-205ENST00000307859 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
TRIM40-205ENST00000307859 ANXA1P04083 346 aa14.86□□□□□ -0.03
TRIM40-205ENST00000307859 GNAI2P04899 355 aa14.86□□□□□ -0.03
TRIM40-205ENST00000307859 SNRPA1P09661 255 aaKnown RBP14.86□□□□□ -0.03
TRIM40-205ENST00000307859 PDIA6Q15084 440 aa14.86□□□□□ -0.03
TRIM40-205ENST00000307859 BARGINQ6ZT62 677 aa14.86□□□□□ -0.03
TRIM40-205ENST00000307859 DNAAF4Q8WXU2 420 aa14.86□□□□□ -0.03
TRIM40-205ENST00000307859 FMNL2Q96PY5 1086 aa14.86□□□□□ -0.03
TRIM40-205ENST00000307859 PI4KAP2A4QPH2 592 aa14.85□□□□□ -0.03
TRIM40-205ENST00000307859 PI4KAP1Q8N8J0 262 aa14.85□□□□□ -0.03
TRIM40-205ENST00000307859 SRCIN1Q9C0H9 1055 aa14.85□□□□□ -0.03
TRIM40-205ENST00000307859 DOT1LQ8TEK3 1739 aa14.85□□□□□ -0.03
TRIM40-205ENST00000307859 BEND3Q5T5X7 828 aa14.84□□□□□ -0.03
TRIM40-205ENST00000307859 LNPKQ9C0E8 428 aa14.84□□□□□ -0.03
TRIM40-205ENST00000307859 USP44Q9H0E7 712 aa14.84□□□□□ -0.03
TRIM40-205ENST00000307859 IBTKQ9P2D0 1353 aaPredicted RBP14.84□□□□□ -0.03
TRIM40-205ENST00000307859 KAT6BQ8WYB5 2073 aa14.84□□□□□ -0.03
TRIM40-205ENST00000307859 HMMRO75330 724 aa14.84□□□□□ -0.03
TRIM40-205ENST00000307859 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
TRIM40-205ENST00000307859 KSR2Q6VAB6 950 aa14.84□□□□□ -0.03
TRIM40-205ENST00000307859 DDX54Q8TDD1 881 aaKnown RBP14.84□□□□□ -0.03
TRIM40-205ENST00000307859 USP35Q9P2H5 1018 aa14.84□□□□□ -0.03
TRIM40-205ENST00000307859 TUBGCP6Q96RT7 1819 aa14.83□□□□□ -0.03
TRIM40-205ENST00000307859 ANP32AP39687 249 aaKnown RBP14.83□□□□□ -0.04
TRIM40-205ENST00000307859 CHD4Q14839 1912 aa14.83□□□□□ -0.04
TRIM40-205ENST00000307859 PLSCR1O15162 318 aa14.82□□□□□ -0.04
TRIM40-205ENST00000307859 PTGER2P43116 358 aa14.82□□□□□ -0.04
TRIM40-205ENST00000307859 LRP10Q7Z4F1 713 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms