RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 CHMP4BP1P59074 171 aa16.53■□□□□ 0.24
CHRNA7-201ENST00000306901 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
CHRNA7-201ENST00000306901 MYO1BO43795 1136 aa16.53■□□□□ 0.24
CHRNA7-201ENST00000306901 BAG4O95429 457 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-201ENST00000306901 CETN2P41208 172 aa16.53■□□□□ 0.24
CHRNA7-201ENST00000306901 FGD6Q6ZV73 1430 aa16.53■□□□□ 0.24
CHRNA7-201ENST00000306901 ATF3P18847 181 aa16.53■□□□□ 0.24
CHRNA7-201ENST00000306901 MTIF2P46199 727 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-201ENST00000306901 BTBD11A6QL63 1104 aa16.52■□□□□ 0.24
CHRNA7-201ENST00000306901 PPP1R1BQ9UD71 204 aaPredicted RBP16.52■□□□□ 0.24
CHRNA7-201ENST00000306901 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
CHRNA7-201ENST00000306901 POLR3DP05423 398 aaPredicted RBP16.52■□□□□ 0.24
CHRNA7-201ENST00000306901 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.24
CHRNA7-201ENST00000306901 ABCF2Q9UG63 623 aa16.52■□□□□ 0.24
CHRNA7-201ENST00000306901 SPG7Q9UQ90 795 aa16.52■□□□□ 0.24
CHRNA7-201ENST00000306901 TRMT1LQ7Z2T5 733 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-201ENST00000306901 PPP1R12BO60237 982 aaPredicted RBP16.52■□□□□ 0.23
CHRNA7-201ENST00000306901 SPECC1LQ69YQ0 1117 aa16.52■□□□□ 0.23
CHRNA7-201ENST00000306901 HYPKQ9NX55 129 aa16.52■□□□□ 0.23
CHRNA7-201ENST00000306901 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.23
CHRNA7-201ENST00000306901 HOOK3Q86VS8 718 aa16.52■□□□□ 0.23
CHRNA7-201ENST00000306901 GSDMDP57764 484 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 CEP57Q86XR8 500 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 CEP112Q8N8E3 955 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 MMRN2Q9H8L6 949 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 CTNNA2P26232 953 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 HSPA4P34932 840 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 NOLC1Q14978 699 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
CHRNA7-201ENST00000306901 CDK19Q9BWU1 502 aa16.5■□□□□ 0.23
CHRNA7-201ENST00000306901 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
CHRNA7-201ENST00000306901 PAXBP1Q9Y5B6 917 aa16.5■□□□□ 0.23
CHRNA7-201ENST00000306901 MSL1Q68DK7 614 aa16.5■□□□□ 0.23
CHRNA7-201ENST00000306901 FBF1Q8TES7 1133 aa16.5■□□□□ 0.23
CHRNA7-201ENST00000306901 VPS36Q86VN1 386 aa16.5■□□□□ 0.23
CHRNA7-201ENST00000306901 PRIMPOLQ96LW4 560 aa16.5■□□□□ 0.23
CHRNA7-201ENST00000306901 NAA15Q9BXJ9 866 aaKnown RBP16.5■□□□□ 0.23
CHRNA7-201ENST00000306901 ZNF165P49910 485 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 SCLT1Q96NL6 688 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 DNAI1Q9UI46 699 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 CCDC6Q16204 474 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 APBB1IPQ7Z5R6 666 aaPredicted RBP16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 NEMFO60524 1076 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 TATP17735 454 aaPredicted RBP16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 RPAP2Q8IXW5 612 aaPredicted RBP16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 PPM1EQ8WY54 764 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 STX6O43752 255 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 SSRP1Q08945 709 aaKnown RBP16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 DNAJC21Q5F1R6 531 aaKnown RBP16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 MCM10Q7L590 875 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 ATRIPQ8WXE1 791 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 LIMCH1Q9UPQ0 1083 aa16.49■□□□□ 0.23
CHRNA7-201ENST00000306901 RRBP1Q9P2E9 1410 aaKnown RBP16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 CTAGE5O15320 804 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 C10orf67Q8IYJ2 551 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 MXRA7P84157 204 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 SLC4A8Q2Y0W8 1093 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 SPATA24Q86W54 205 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 VPS18Q9P253 973 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 ANO6Q4KMQ2 910 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 A0A1W2PRG0 241 aa16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 XRCC6P12956 609 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
CHRNA7-201ENST00000306901 F6X3S4 739 aa16.47■□□□□ 0.23
CHRNA7-201ENST00000306901 CNPY2Q9Y2B0 182 aa16.47■□□□□ 0.23
CHRNA7-201ENST00000306901 TCERG1LQ5VWI1 586 aa16.47■□□□□ 0.23
CHRNA7-201ENST00000306901 LRSAM1Q6UWE0 723 aa16.47■□□□□ 0.23
CHRNA7-201ENST00000306901 TTC31Q49AM3 519 aaPredicted RBP16.47■□□□□ 0.23
CHRNA7-201ENST00000306901 TBC1D9Q6ZT07 1266 aa16.47■□□□□ 0.23
CHRNA7-201ENST00000306901 SH2B1Q9NRF2 756 aaPredicted RBP16.47■□□□□ 0.23
CHRNA7-201ENST00000306901 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 TTC12Q9H892 705 aaPredicted RBP16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 RANBP6O60518 1105 aaKnown RBP16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 CAPN2P17655 700 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 C6orf163Q5TEZ5 329 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 CCDC186Q7Z3E2 898 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 MCM5P33992 734 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 CCDC40Q4G0X9 1142 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 GOLGA8AA7E2F4 631 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 PHACTR2O75167 634 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 NLRP5P59047 1200 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 KIF1BPQ96EK5 621 aa16.46■□□□□ 0.23
CHRNA7-201ENST00000306901 SMIM23A6NLE4 172 aa16.45■□□□□ 0.22
CHRNA7-201ENST00000306901 CCDC150Q8NCX0 1101 aa16.45■□□□□ 0.22
CHRNA7-201ENST00000306901 CAPZA3Q96KX2 299 aa16.45■□□□□ 0.22
CHRNA7-201ENST00000306901 SELENOSQ9BQE4 189 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms