RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SLC27A3Q5K4L6 730 aa34.94■■■■□ 3.18
HDAC3-201ENST00000305264 CAMKK2Q96RR4 588 aa34.94■■■■□ 3.18
HDAC3-201ENST00000305264 TCERG1O14776 1098 aaKnown RBP34.94■■■■□ 3.18
HDAC3-201ENST00000305264 CYP19A1P11511 503 aaPredicted RBP34.94■■■■□ 3.18
HDAC3-201ENST00000305264 MYH14Q7Z406 1995 aaKnown RBP34.93■■■■□ 3.18
HDAC3-201ENST00000305264 EZH2Q15910 746 aaKnown RBP34.93■■■■□ 3.18
HDAC3-201ENST00000305264 RREB1Q92766 1687 aa34.93■■■■□ 3.18
HDAC3-201ENST00000305264 C4BP0C0L5 1744 aa34.91■■■■□ 3.18
HDAC3-201ENST00000305264 STARD3NLO95772 234 aa34.91■■■■□ 3.18
HDAC3-201ENST00000305264 A1BGP04217 495 aa34.89■■■■□ 3.18
HDAC3-201ENST00000305264 PIP4K2AP48426 406 aaPredicted RBP34.89■■■■□ 3.18
HDAC3-201ENST00000305264 CCDC30Q5VVM6 783 aa34.89■■■■□ 3.18
HDAC3-201ENST00000305264 BCL2L13Q9BXK5 485 aa34.89■■■■□ 3.18
HDAC3-201ENST00000305264 CHPF2Q9P2E5 772 aa34.89■■■■□ 3.18
HDAC3-201ENST00000305264 RARSP54136 660 aaKnown RBP34.89■■■■□ 3.18
HDAC3-201ENST00000305264 ZNF428Q96B54 188 aa34.89■■■■□ 3.18
HDAC3-201ENST00000305264 CRKLP46109 303 aaKnown RBP34.88■■■■□ 3.17
HDAC3-201ENST00000305264 SSH1Q8WYL5 1049 aa34.88■■■■□ 3.17
HDAC3-201ENST00000305264 NUP188Q5SRE5 1749 aa34.87■■■■□ 3.17
HDAC3-201ENST00000305264 PROSER3Q2NL68 480 aa34.87■■■■□ 3.17
HDAC3-201ENST00000305264 ANXA1P04083 346 aa34.86■■■■□ 3.17
HDAC3-201ENST00000305264 PDIA6Q15084 440 aa34.86■■■■□ 3.17
HDAC3-201ENST00000305264 RCAN3Q9UKA8 241 aa34.86■■■■□ 3.17
HDAC3-201ENST00000305264 NBPF26B4DH59 902 aa34.85■■■■□ 3.17
HDAC3-201ENST00000305264 NBPF14Q5TI25 921 aa34.85■■■■□ 3.17
HDAC3-201ENST00000305264 NBPF10Q6P3W6 841 aaKnown RBP34.85■■■■□ 3.17
HDAC3-201ENST00000305264 NBPF15Q8N660 670 aa34.85■■■■□ 3.17
HDAC3-201ENST00000305264 ZBTB1Q9Y2K1 713 aa34.85■■■■□ 3.17
HDAC3-201ENST00000305264 INTS5Q6P9B9 1019 aaKnown RBP34.85■■■■□ 3.17
HDAC3-201ENST00000305264 CNTNAP4Q9C0A0 1308 aa34.84■■■■□ 3.17
HDAC3-201ENST00000305264 ALDH1L2Q3SY69 923 aa34.84■■■■□ 3.17
HDAC3-201ENST00000305264 CCDC87Q9NVE4 849 aa34.84■■■■□ 3.17
HDAC3-201ENST00000305264 CACNA1FO60840 1977 aa34.84■■■■□ 3.17
HDAC3-201ENST00000305264 STK31Q9BXU1 1019 aa34.83■■■■□ 3.17
HDAC3-201ENST00000305264 SMC4Q9NTJ3 1288 aa34.83■■■■□ 3.17
HDAC3-201ENST00000305264 ERBB4Q15303 1308 aa34.83■■■■□ 3.17
HDAC3-201ENST00000305264 CHMP4AQ9BY43 222 aa34.83■■■■□ 3.17
HDAC3-201ENST00000305264 DBF4Q9UBU7 674 aaPredicted RBP34.83■■■■□ 3.17
HDAC3-201ENST00000305264 BCAR3O75815 825 aa34.82■■■■□ 3.16
HDAC3-201ENST00000305264 MYL6BP14649 208 aa34.82■■■■□ 3.16
HDAC3-201ENST00000305264 DDX21Q9NR30 783 aaKnown RBP eCLIP34.82■■■■□ 3.16
HDAC3-201ENST00000305264 CANXP27824 592 aaKnown RBP34.81■■■■□ 3.16
HDAC3-201ENST00000305264 SLC4A2P04920 1241 aa34.8■■■■□ 3.16
HDAC3-201ENST00000305264 CENPBP07199 599 aaPredicted RBP34.8■■■■□ 3.16
HDAC3-201ENST00000305264 MRPL50Q8N5N7 158 aaKnown RBP34.8■■■■□ 3.16
HDAC3-201ENST00000305264 LRP10Q7Z4F1 713 aa34.79■■■■□ 3.16
HDAC3-201ENST00000305264 UBR3Q6ZT12 1888 aa34.79■■■■□ 3.16
HDAC3-201ENST00000305264 RC3H1Q5TC82 1133 aaKnown RBP34.78■■■■□ 3.16
HDAC3-201ENST00000305264 G2E3Q7L622 706 aa34.76■■■■□ 3.16
HDAC3-201ENST00000305264 TUBGCP6Q96RT7 1819 aa34.76■■■■□ 3.15
HDAC3-201ENST00000305264 GNPATO15228 680 aa34.76■■■■□ 3.15
HDAC3-201ENST00000305264 ZNF827Q17R98 1081 aa34.76■■■■□ 3.15
HDAC3-201ENST00000305264 AK7Q96M32 723 aa34.76■■■■□ 3.15
HDAC3-201ENST00000305264 PHAXQ9H814 394 aaKnown RBP34.76■■■■□ 3.15
HDAC3-201ENST00000305264 ZNF330Q9Y3S2 320 aaPredicted RBP34.76■■■■□ 3.15
HDAC3-201ENST00000305264 AMIGO3Q86WK7 504 aa34.75■■■■□ 3.15
HDAC3-201ENST00000305264 HYPKQ9NX55 129 aa34.74■■■■□ 3.15
HDAC3-201ENST00000305264 IL6STP40189 918 aaPredicted RBP34.73■■■■□ 3.15
HDAC3-201ENST00000305264 SMIM5Q71RC9 77 aa34.73■■■■□ 3.15
HDAC3-201ENST00000305264 AKT1S1Q96B36 256 aa34.73■■■■□ 3.15
HDAC3-201ENST00000305264 ANO8Q9HCE9 1232 aaPredicted RBP34.73■■■■□ 3.15
HDAC3-201ENST00000305264 EIF5P55010 431 aaKnown RBP34.72■■■■□ 3.15
HDAC3-201ENST00000305264 BRPF1P55201 1214 aaPredicted RBP34.72■■■■□ 3.15
HDAC3-201ENST00000305264 HMGB2P26583 209 aaKnown RBP34.71■■■■□ 3.15
HDAC3-201ENST00000305264 RPS6KA4O75676 772 aa34.71■■■■□ 3.15
HDAC3-201ENST00000305264 FLIIQ13045 1269 aa34.71■■■■□ 3.15
HDAC3-201ENST00000305264 XAGE3Q8WTP9 111 aa34.71■■■■□ 3.15
HDAC3-201ENST00000305264 COL15A1P39059 1388 aa34.7■■■■□ 3.15
HDAC3-201ENST00000305264 AIMP1Q12904 312 aaKnown RBP34.69■■■■□ 3.14
HDAC3-201ENST00000305264 C4AP0C0L4 1744 aa34.69■■■■□ 3.14
HDAC3-201ENST00000305264 KIF16BQ96L93 1317 aa34.69■■■■□ 3.14
HDAC3-201ENST00000305264 RTCBQ9Y3I0 505 aaKnown RBP34.69■■■■□ 3.14
HDAC3-201ENST00000305264 COPS6Q7L5N1 327 aa34.68■■■■□ 3.14
HDAC3-201ENST00000305264 NOB1Q9ULX3 412 aaKnown RBP34.68■■■■□ 3.14
HDAC3-201ENST00000305264 PHF14O94880 888 aa34.67■■■■□ 3.14
HDAC3-201ENST00000305264 TTLL7Q6ZT98 887 aa34.67■■■■□ 3.14
HDAC3-201ENST00000305264 FRAT1Q92837 279 aaPredicted RBP34.67■■■■□ 3.14
HDAC3-201ENST00000305264 TFCP2L1Q9NZI6 479 aa34.65■■■■□ 3.14
HDAC3-201ENST00000305264 FKBP5Q13451 457 aaPredicted RBP34.64■■■■□ 3.14
HDAC3-201ENST00000305264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.63■■■■□ 3.13
HDAC3-201ENST00000305264 SLC15A2Q16348 729 aa34.63■■■■□ 3.13
HDAC3-201ENST00000305264 NPM2Q86SE8 214 aaKnown RBP34.63■■■■□ 3.13
HDAC3-201ENST00000305264 STK32BQ9NY57 414 aa34.63■■■■□ 3.13
HDAC3-201ENST00000305264 ARFGEF2Q9Y6D5 1785 aa34.63■■■■□ 3.13
HDAC3-201ENST00000305264 ARXQ96QS3 562 aa34.62■■■■□ 3.13
HDAC3-201ENST00000305264 PTPRCP08575 1304 aa34.62■■■■□ 3.13
HDAC3-201ENST00000305264 QSER1Q2KHR3 1735 aa34.62■■■■□ 3.13
HDAC3-201ENST00000305264 BCORQ6W2J9 1755 aa34.62■■■■□ 3.13
HDAC3-201ENST00000305264 PLIN1O60240 522 aa34.62■■■■□ 3.13
HDAC3-201ENST00000305264 SSFA2P28290 1259 aa34.62■■■■□ 3.13
HDAC3-201ENST00000305264 TBC1D2BQ9UPU7 963 aa34.62■■■■□ 3.13
HDAC3-201ENST00000305264 DZIP3Q86Y13 1208 aaKnown RBP34.61■■■■□ 3.13
HDAC3-201ENST00000305264 ADCY9O60503 1353 aa34.61■■■■□ 3.13
HDAC3-201ENST00000305264 SCN7AQ01118 1682 aa34.6■■■■□ 3.13
HDAC3-201ENST00000305264 SUPT16HQ9Y5B9 1047 aaKnown RBP34.6■■■■□ 3.13
HDAC3-201ENST00000305264 ARHGEF1Q92888 912 aaKnown RBP34.6■■■■□ 3.13
HDAC3-201ENST00000305264 TNNQ9UQP3 1299 aa34.6■■■■□ 3.13
HDAC3-201ENST00000305264 TRAPPC3LQ5T215 181 aa34.59■■■■□ 3.13
HDAC3-201ENST00000305264 ADRA2BP18089 450 aa34.58■■■■□ 3.13
HDAC3-201ENST00000305264 KIF6Q6ZMV9 814 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms