RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 PTMSP20962 102 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 FAM43AQ8N2R8 423 aa8.88□□□□□ -0.99
RGPD3-201ENST00000304514 APBB1O00213 710 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 UTYO14607 1347 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 CHMLP26374 656 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 FOXD4L1Q9NU39 408 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 UNC5CLQ8IV45 518 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 IL25Q9H293 177 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 GOLGA6L3A6NEY3 463 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 RAB11FIP3O75154 756 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 SRCIN1Q9C0H9 1055 aa8.87□□□□□ -0.99
RGPD3-201ENST00000304514 AXIN2Q9Y2T1 843 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 PLCH1Q4KWH8 1693 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 REC8O95072 547 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 PSME1Q06323 249 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 GBP4Q96PP9 640 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 ZDHHC9Q9Y397 364 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 NHSL1Q5SYE7 1610 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 BTBD11A6QL63 1104 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 AMOTQ4VCS5 1084 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 ORAI2Q96SN7 254 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 KCPQ6ZWJ8 1503 aa8.86□□□□□ -0.99
RGPD3-201ENST00000304514 GCP02774 474 aa8.85□□□□□ -0.99
RGPD3-201ENST00000304514 UBTFL1P0CB47 393 aaPredicted RBP8.85□□□□□ -0.99
RGPD3-201ENST00000304514 EPB41L2O43491 1005 aaKnown RBP8.85□□□□□ -0.99
RGPD3-201ENST00000304514 PKP1Q13835 747 aa8.85□□□□□ -0.99
RGPD3-201ENST00000304514 ANKRD24Q8TF21 1146 aa8.85□□□□□ -0.99
RGPD3-201ENST00000304514 MTX1Q13505 466 aa8.85□□□□□ -0.99
RGPD3-201ENST00000304514 SKOR2Q2VWA4 1001 aaPredicted RBP8.85□□□□□ -0.99
RGPD3-201ENST00000304514 PALD1Q9ULE6 856 aa8.85□□□□□ -0.99
RGPD3-201ENST00000304514 BAG4O95429 457 aaKnown RBP8.85□□□□□ -0.99
RGPD3-201ENST00000304514 NBPF7P0C2Y1 421 aaPredicted RBP8.85□□□□□ -0.99
RGPD3-201ENST00000304514 PDIA6Q15084 440 aa8.85□□□□□ -0.99
RGPD3-201ENST00000304514 CWC22Q9HCG8 908 aaKnown RBP8.85□□□□□ -0.99
RGPD3-201ENST00000304514 PLEKHO1Q53GL0 409 aaPredicted RBP8.85□□□□□ -0.99
RGPD3-201ENST00000304514 PPP1R42Q7Z4L9 355 aa8.85□□□□□ -0.99
RGPD3-201ENST00000304514 DNAAF4Q8WXU2 420 aa8.84□□□□□ -0.99
RGPD3-201ENST00000304514 RTN4Q9NQC3 1192 aaKnown RBP8.84□□□□□ -0.99
RGPD3-201ENST00000304514 TNS3Q68CZ2 1445 aa8.84□□□□□ -0.99
RGPD3-201ENST00000304514 ANAPC15P60006 121 aa8.84□□□□□ -0.99
RGPD3-201ENST00000304514 MPRIPQ6WCQ1 1025 aa8.84□□□□□ -0.99
RGPD3-201ENST00000304514 ANKRD36CQ5JPF3 1778 aa8.84□□□□□ -0.99
RGPD3-201ENST00000304514 PRAMEF22A3QJZ6 481 aa8.84□□□□□ -0.99
RGPD3-201ENST00000304514 PROSER3Q2NL68 480 aa8.84□□□□□ -0.99
RGPD3-201ENST00000304514 ZGPATQ8N5A5 531 aaKnown RBP8.84□□□□□ -0.99
RGPD3-201ENST00000304514 ISY1Q9ULR0 285 aaKnown RBP8.84□□□□□ -0.99
RGPD3-201ENST00000304514 GIGYF1O75420 1035 aaPredicted RBP8.84□□□□□ -0.99
RGPD3-201ENST00000304514 PANK2Q9BZ23 570 aa8.84□□□□□ -0.99
RGPD3-201ENST00000304514 GZF1Q9H116 711 aaPredicted RBP8.84□□□□□ -0.99
RGPD3-201ENST00000304514 C14orf37Q86TY3 774 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 GAS2L3Q86XJ1 694 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 GRPEL1Q9HAV7 217 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 RPAP1Q9BWH6 1393 aaPredicted RBP8.83□□□□□ -1
RGPD3-201ENST00000304514 PLEKHG5O94827 1062 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 ZNF530Q6P9A1 599 aaPredicted RBP8.83□□□□□ -1
RGPD3-201ENST00000304514 ERBB3P21860 1342 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 ST18O60284 1047 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 MRE11P49959 708 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 CUL4AQ13619 759 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 LMBRD1Q9NUN5 540 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 JCADQ9P266 1359 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 RHPN1Q8TCX5 695 aa8.83□□□□□ -1
RGPD3-201ENST00000304514 LSG1Q9H089 658 aaKnown RBP8.82□□□□□ -1
RGPD3-201ENST00000304514 HSPA4P34932 840 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 KLHL40Q2TBA0 621 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 LRP10Q7Z4F1 713 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 ITGB4P16144 1822 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 PI4KAP2A4QPH2 592 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 XPCQ01831 940 aaPredicted RBP8.82□□□□□ -1
RGPD3-201ENST00000304514 PI4KAP1Q8N8J0 262 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 RRAGDQ9NQL2 400 aaPredicted RBP8.82□□□□□ -1
RGPD3-201ENST00000304514 SPEF2Q9C093 1822 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 NUCB2P80303 420 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 MAP3K2Q9Y2U5 619 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 CASZ1Q86V15 1759 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 COL15A1P39059 1388 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 TTC41PQ6P2S7 1318 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 EIF2S2P20042 333 aaKnown RBP8.82□□□□□ -1
RGPD3-201ENST00000304514 TMX3Q96JJ7 454 aa8.82□□□□□ -1
RGPD3-201ENST00000304514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.82□□□□□ -1
RGPD3-201ENST00000304514 ALDH1L1O75891 902 aa8.81□□□□□ -1
RGPD3-201ENST00000304514 KRT28Q7Z3Y7 464 aa8.81□□□□□ -1
RGPD3-201ENST00000304514 ARAP2Q8WZ64 1704 aa8.81□□□□□ -1
RGPD3-201ENST00000304514 KAZALD1Q96I82 304 aa8.81□□□□□ -1
RGPD3-201ENST00000304514 DBF4Q9UBU7 674 aaPredicted RBP8.81□□□□□ -1
RGPD3-201ENST00000304514 GPT2Q8TD30 523 aa8.81□□□□□ -1
RGPD3-201ENST00000304514 RAD50Q92878 1312 aa8.81□□□□□ -1
RGPD3-201ENST00000304514 KSR2Q6VAB6 950 aa8.81□□□□□ -1
RGPD3-201ENST00000304514 C1orf141Q5JVX7 400 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 KCNB2Q92953 911 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 KIF1BPQ96EK5 621 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 TTC14Q96N46 770 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 IL1RAPL2Q9NP60 686 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 SRGAP3O43295 1099 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 CPDO75976 1380 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 NWD2Q9ULI1 1742 aa8.8□□□□□ -1
RGPD3-201ENST00000304514 MAP4K4O95819 1239 aaPredicted RBP8.8□□□□□ -1
RGPD3-201ENST00000304514 RILPL2Q969X0 211 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms