RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 AFDNP55196 1824 aaKnown RBP21.3■■□□□ 1
POLR1C-201ENST00000304004 RPS6KA4O75676 772 aa21.3■■□□□ 1
POLR1C-201ENST00000304004 CYP19A1P11511 503 aaPredicted RBP21.3■■□□□ 1
POLR1C-201ENST00000304004 POLD1P28340 1107 aa21.3■■□□□ 1
POLR1C-201ENST00000304004 TMPOP42166 694 aaKnown RBP21.3■■□□□ 1
POLR1C-201ENST00000304004 MSL1Q68DK7 614 aa21.3■■□□□ 1
POLR1C-201ENST00000304004 FMNL2Q96PY5 1086 aa21.3■■□□□ 1
POLR1C-201ENST00000304004 CCDC87Q9NVE4 849 aa21.3■■□□□ 1
POLR1C-201ENST00000304004 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
POLR1C-201ENST00000304004 KCNQ3O43525 872 aa21.28■■□□□ 1
POLR1C-201ENST00000304004 RIPK4P57078 832 aa21.28■■□□□ 1
POLR1C-201ENST00000304004 TAF7Q15545 349 aaPredicted RBP21.28■■□□□ 1
POLR1C-201ENST00000304004 CCDC184Q52MB2 194 aa21.28■■□□□ 1
POLR1C-201ENST00000304004 INTS5Q6P9B9 1019 aaKnown RBP21.28■■□□□ 1
POLR1C-201ENST00000304004 ARXQ96QS3 562 aa21.28■■□□□ 1
POLR1C-201ENST00000304004 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
POLR1C-201ENST00000304004 TRAPPC3LQ5T215 181 aa21.27■■□□□ 1
POLR1C-201ENST00000304004 SOS1Q07889 1333 aaPredicted RBP21.27■□□□□ 0.99
POLR1C-201ENST00000304004 COL15A1P39059 1388 aa21.26■□□□□ 0.99
POLR1C-201ENST00000304004 RRP7AQ9Y3A4 280 aaKnown RBP21.26■□□□□ 0.99
POLR1C-201ENST00000304004 KIAA1551Q9HCM1 1747 aa21.26■□□□□ 0.99
POLR1C-201ENST00000304004 CHD4Q14839 1912 aa21.25■□□□□ 0.99
POLR1C-201ENST00000304004 STARD3NLO95772 234 aa21.25■□□□□ 0.99
POLR1C-201ENST00000304004 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
POLR1C-201ENST00000304004 TEX13AQ9BXU3 409 aaPredicted RBP21.25■□□□□ 0.99
POLR1C-201ENST00000304004 MRS2Q9HD23 443 aa21.25■□□□□ 0.99
POLR1C-201ENST00000304004 ZBTB1Q9Y2K1 713 aa21.25■□□□□ 0.99
POLR1C-201ENST00000304004 ARHGEF1Q92888 912 aaKnown RBP21.24■□□□□ 0.99
POLR1C-201ENST00000304004 FHDC1Q9C0D6 1143 aaPredicted RBP21.24■□□□□ 0.99
POLR1C-201ENST00000304004 BRCA1P38398 1863 aaKnown RBP21.24■□□□□ 0.99
POLR1C-201ENST00000304004 NRXN2Q9P2S2 1712 aa21.24■□□□□ 0.99
POLR1C-201ENST00000304004 RFC4P35249 363 aa21.23■□□□□ 0.99
POLR1C-201ENST00000304004 USP42Q9H9J4 1324 aaKnown RBP21.23■□□□□ 0.99
POLR1C-201ENST00000304004 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
POLR1C-201ENST00000304004 NUP98P52948 1817 aa21.22■□□□□ 0.99
POLR1C-201ENST00000304004 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
POLR1C-201ENST00000304004 MIS18AQ9NYP9 233 aa21.22■□□□□ 0.99
POLR1C-201ENST00000304004 SNRPA1P09661 255 aaKnown RBP21.21■□□□□ 0.99
POLR1C-201ENST00000304004 GYS1P13807 737 aa21.2■□□□□ 0.98
POLR1C-201ENST00000304004 TRIM35Q9UPQ4 493 aa21.2■□□□□ 0.98
POLR1C-201ENST00000304004 SAMD1Q6SPF0 538 aaPredicted RBP21.19■□□□□ 0.98
POLR1C-201ENST00000304004 SYT17Q9BSW7 474 aa21.19■□□□□ 0.98
POLR1C-201ENST00000304004 SRP68Q9UHB9 627 aaKnown RBP21.19■□□□□ 0.98
POLR1C-201ENST00000304004 DLEC1Q9Y238 1755 aa21.18■□□□□ 0.98
POLR1C-201ENST00000304004 PRAMEF22A3QJZ6 481 aa21.18■□□□□ 0.98
POLR1C-201ENST00000304004 APAF1O14727 1248 aa21.18■□□□□ 0.98
POLR1C-201ENST00000304004 CANXP27824 592 aaKnown RBP21.18■□□□□ 0.98
POLR1C-201ENST00000304004 TSPYL4Q9UJ04 414 aa21.18■□□□□ 0.98
POLR1C-201ENST00000304004 KLHL34Q8N239 644 aa21.17■□□□□ 0.98
POLR1C-201ENST00000304004 NLGN1Q8N2Q7 840 aa21.17■□□□□ 0.98
POLR1C-201ENST00000304004 BABAM1Q9NWV8 329 aa21.17■□□□□ 0.98
POLR1C-201ENST00000304004 ANKRD36CQ5JPF3 1778 aa21.17■□□□□ 0.98
POLR1C-201ENST00000304004 MMP10P09238 476 aa21.16■□□□□ 0.98
POLR1C-201ENST00000304004 EIF5P55010 431 aaKnown RBP21.16■□□□□ 0.98
POLR1C-201ENST00000304004 EIF4A1P60842 406 aaKnown RBP21.16■□□□□ 0.98
POLR1C-201ENST00000304004 USP16Q9Y5T5 823 aa21.16■□□□□ 0.98
POLR1C-201ENST00000304004 ANKRD31Q8N7Z5 1873 aa21.15■□□□□ 0.98
POLR1C-201ENST00000304004 C10orf71Q711Q0 1435 aa21.15■□□□□ 0.98
POLR1C-201ENST00000304004 ZPR1O75312 459 aa21.15■□□□□ 0.98
POLR1C-201ENST00000304004 A1BGP04217 495 aa21.15■□□□□ 0.98
POLR1C-201ENST00000304004 IL6STP40189 918 aaPredicted RBP21.15■□□□□ 0.98
POLR1C-201ENST00000304004 NARFQ9UHQ1 456 aa21.15■□□□□ 0.98
POLR1C-201ENST00000304004 A0A087WZG4 1122 aa21.14■□□□□ 0.97
POLR1C-201ENST00000304004 ARFGEF1Q9Y6D6 1849 aa21.13■□□□□ 0.97
POLR1C-201ENST00000304004 GIGYF1O75420 1035 aaPredicted RBP21.13■□□□□ 0.97
POLR1C-201ENST00000304004 USPL1Q5W0Q7 1092 aa21.13■□□□□ 0.97
POLR1C-201ENST00000304004 ZNF330Q9Y3S2 320 aaPredicted RBP21.13■□□□□ 0.97
POLR1C-201ENST00000304004 CACNA1FO60840 1977 aa21.13■□□□□ 0.97
POLR1C-201ENST00000304004 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
POLR1C-201ENST00000304004 CACNA1SQ13698 1873 aa21.11■□□□□ 0.97
POLR1C-201ENST00000304004 CHL1O00533 1208 aa21.11■□□□□ 0.97
POLR1C-201ENST00000304004 NLGN2Q8NFZ4 835 aa21.11■□□□□ 0.97
POLR1C-201ENST00000304004 PIP4K2AP48426 406 aaPredicted RBP21.1■□□□□ 0.97
POLR1C-201ENST00000304004 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
POLR1C-201ENST00000304004 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
POLR1C-201ENST00000304004 COL11A2P13942 1736 aaPredicted RBP21.09■□□□□ 0.97
POLR1C-201ENST00000304004 GOLGB1Q14789 3259 aaKnown RBP21.09■□□□□ 0.97
POLR1C-201ENST00000304004 NBPF26B4DH59 902 aa21.09■□□□□ 0.97
POLR1C-201ENST00000304004 NBPF10Q6P3W6 841 aaKnown RBP21.09■□□□□ 0.97
POLR1C-201ENST00000304004 NBPF15Q8N660 670 aa21.09■□□□□ 0.97
POLR1C-201ENST00000304004 BCL2L12Q9HB09 334 aa21.09■□□□□ 0.97
POLR1C-201ENST00000304004 LAS1LQ9Y4W2 734 aaKnown RBP21.09■□□□□ 0.97
POLR1C-201ENST00000304004 PARP3Q9Y6F1 533 aa21.09■□□□□ 0.97
POLR1C-201ENST00000304004 DDR1Q08345 913 aa21.08■□□□□ 0.97
POLR1C-201ENST00000304004 CFAP44Q96MT7 982 aa21.08■□□□□ 0.97
POLR1C-201ENST00000304004 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
POLR1C-201ENST00000304004 ERBB4Q15303 1308 aa21.07■□□□□ 0.96
POLR1C-201ENST00000304004 DCAF8L1A6NGE4 600 aa21.07■□□□□ 0.96
POLR1C-201ENST00000304004 IFT57Q9NWB7 429 aa21.07■□□□□ 0.96
POLR1C-201ENST00000304004 TBC1D2BQ9UPU7 963 aa21.07■□□□□ 0.96
POLR1C-201ENST00000304004 ARFGEF2Q9Y6D5 1785 aa21.07■□□□□ 0.96
POLR1C-201ENST00000304004 CCDC27Q2M243 656 aa21.06■□□□□ 0.96
POLR1C-201ENST00000304004 DZIP3Q86Y13 1208 aaKnown RBP21.06■□□□□ 0.96
POLR1C-201ENST00000304004 POLRMTO00411 1230 aaKnown RBP21.05■□□□□ 0.96
POLR1C-201ENST00000304004 CAMTA2O94983 1202 aa21.05■□□□□ 0.96
POLR1C-201ENST00000304004 ZNF853P0CG23 659 aa21.05■□□□□ 0.96
POLR1C-201ENST00000304004 TM4SF1P30408 202 aa21.05■□□□□ 0.96
POLR1C-201ENST00000304004 NFIXQ14938 502 aa21.05■□□□□ 0.96
POLR1C-201ENST00000304004 GNAI1P63096 354 aa21.04■□□□□ 0.96
POLR1C-201ENST00000304004 FAM9BQ8IZU0 186 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms