RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
CDT1-201ENST00000301019 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
CDT1-201ENST00000301019 FOSBP53539 338 aa17.17■□□□□ 0.34
CDT1-201ENST00000301019 DNAJC25Q9H1X3 360 aa17.17■□□□□ 0.34
CDT1-201ENST00000301019 WDR33Q9C0J8 1336 aaKnown RBP17.17■□□□□ 0.34
CDT1-201ENST00000301019 TCHHQ07283 1943 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 LIG1P18858 919 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 SART3Q15020 963 aaKnown RBP17.16■□□□□ 0.34
CDT1-201ENST00000301019 PTPN14Q15678 1187 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 IL25Q9H293 177 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 CCDC192P0DO97 292 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 SYT1P21579 422 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
CDT1-201ENST00000301019 PPFIA3O75145 1194 aa17.15■□□□□ 0.34
CDT1-201ENST00000301019 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
CDT1-201ENST00000301019 STK26Q9P289 416 aa17.15■□□□□ 0.34
CDT1-201ENST00000301019 ANKRD36BQ8N2N9 1353 aa17.15■□□□□ 0.34
CDT1-201ENST00000301019 MEIS3Q99687 375 aa17.15■□□□□ 0.34
CDT1-201ENST00000301019 UBE2HP62256 183 aa17.15■□□□□ 0.34
CDT1-201ENST00000301019 MRPL50Q8N5N7 158 aaKnown RBP17.14■□□□□ 0.33
CDT1-201ENST00000301019 NECAB1Q8N987 351 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 DRC1Q96MC2 740 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 SPATA31D1Q6ZQQ2 1576 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 IFT172Q9UG01 1749 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 GOLGA6L4A6NEF3 574 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 VAMP4O75379 141 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 GTF2A1P52655 376 aaPredicted RBP17.14■□□□□ 0.33
CDT1-201ENST00000301019 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDT1-201ENST00000301019 CBX8Q9HC52 389 aa17.14■□□□□ 0.33
CDT1-201ENST00000301019 STX6O43752 255 aa17.13■□□□□ 0.33
CDT1-201ENST00000301019 E2F4Q16254 413 aa17.13■□□□□ 0.33
CDT1-201ENST00000301019 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
CDT1-201ENST00000301019 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
CDT1-201ENST00000301019 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
CDT1-201ENST00000301019 LRRFIP2Q9Y608 721 aaKnown RBP17.13■□□□□ 0.33
CDT1-201ENST00000301019 TYRO3Q06418 890 aa17.13■□□□□ 0.33
CDT1-201ENST00000301019 TCEANC2Q96MN5 208 aa17.13■□□□□ 0.33
CDT1-201ENST00000301019 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
CDT1-201ENST00000301019 NRXN1Q9ULB1 1477 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 LAMC1P11047 1609 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 F6X3S4 739 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 TULP2O00295 520 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 LARGE1O95461 756 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 ZSCAN22P10073 491 aaPredicted RBP17.12■□□□□ 0.33
CDT1-201ENST00000301019 SKILP12757 684 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 PTPN21Q16825 1174 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 NECTIN2Q92692 538 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 IL1RAPL2Q9NP60 686 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDT1-201ENST00000301019 SMARCE1Q969G3 411 aa17.12■□□□□ 0.33
CDT1-201ENST00000301019 MCCP23508 829 aa17.11■□□□□ 0.33
CDT1-201ENST00000301019 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
CDT1-201ENST00000301019 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
CDT1-201ENST00000301019 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
CDT1-201ENST00000301019 SCAF11Q99590 1463 aaKnown RBP17.11■□□□□ 0.33
CDT1-201ENST00000301019 RASSF4Q9H2L5 321 aa17.11■□□□□ 0.33
CDT1-201ENST00000301019 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
CDT1-201ENST00000301019 PLEKHA4Q9H4M7 779 aa17.11■□□□□ 0.33
CDT1-201ENST00000301019 PPLO60437 1756 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 TMEM131LA2VDJ0 1609 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 VGFO15240 615 aaPredicted RBP17.1■□□□□ 0.33
CDT1-201ENST00000301019 CYP2C19P33261 490 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
CDT1-201ENST00000301019 MRVI1Q9Y6F6 885 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 CLCN6P51797 869 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
CDT1-201ENST00000301019 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 FAM200AQ8TCP9 573 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 NUP62CLQ9H1M0 184 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 NEXMIFQ5QGS0 1516 aa17.1■□□□□ 0.33
CDT1-201ENST00000301019 LMAN1P49257 510 aa17.09■□□□□ 0.33
CDT1-201ENST00000301019 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
CDT1-201ENST00000301019 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
CDT1-201ENST00000301019 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
CDT1-201ENST00000301019 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
CDT1-201ENST00000301019 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
CDT1-201ENST00000301019 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
CDT1-201ENST00000301019 ZNF165P49910 485 aa17.09■□□□□ 0.33
CDT1-201ENST00000301019 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
CDT1-201ENST00000301019 SOX12O15370 315 aa17.08■□□□□ 0.33
CDT1-201ENST00000301019 F13A1P00488 732 aa17.08■□□□□ 0.33
CDT1-201ENST00000301019 PDE1AP54750 535 aa17.08■□□□□ 0.33
CDT1-201ENST00000301019 ESYT1Q9BSJ8 1104 aa17.08■□□□□ 0.33
CDT1-201ENST00000301019 MYO1CO00159 1063 aa17.08■□□□□ 0.32
CDT1-201ENST00000301019 GJB2P29033 226 aa17.08■□□□□ 0.32
CDT1-201ENST00000301019 FUCA2Q9BTY2 467 aa17.08■□□□□ 0.32
CDT1-201ENST00000301019 NPC1L1Q9UHC9 1359 aa17.08■□□□□ 0.32
CDT1-201ENST00000301019 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
CDT1-201ENST00000301019 CEBPAP49715 358 aaPredicted RBP17.08■□□□□ 0.32
CDT1-201ENST00000301019 ZNF75DP51815 510 aa17.08■□□□□ 0.32
CDT1-201ENST00000301019 AK2P54819 239 aa17.08■□□□□ 0.32
CDT1-201ENST00000301019 HOMER1Q86YM7 354 aa17.08■□□□□ 0.32
CDT1-201ENST00000301019 BICD2Q8TD16 824 aa17.08■□□□□ 0.32
CDT1-201ENST00000301019 ZSWIM4Q9H7M6 989 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms