RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 SYT17Q9BSW7 474 aa15.79■□□□□ 0.12
CDK5-201ENST00000297518 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
CDK5-201ENST00000297518 ZBTB1Q9Y2K1 713 aa15.79■□□□□ 0.12
CDK5-201ENST00000297518 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
CDK5-201ENST00000297518 PNISRQ8TF01 805 aaKnown RBP15.78■□□□□ 0.12
CDK5-201ENST00000297518 USP42Q9H9J4 1324 aaKnown RBP15.77■□□□□ 0.12
CDK5-201ENST00000297518 GYS1P13807 737 aa15.77■□□□□ 0.12
CDK5-201ENST00000297518 RRP7AQ9Y3A4 280 aaKnown RBP15.77■□□□□ 0.12
CDK5-201ENST00000297518 COL15A1P39059 1388 aa15.76■□□□□ 0.11
CDK5-201ENST00000297518 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
CDK5-201ENST00000297518 NLGN1Q8N2Q7 840 aa15.76■□□□□ 0.11
CDK5-201ENST00000297518 MIS18AQ9NYP9 233 aa15.76■□□□□ 0.11
CDK5-201ENST00000297518 LAMB4A4D0S4 1761 aa15.75■□□□□ 0.11
CDK5-201ENST00000297518 MMP10P09238 476 aa15.75■□□□□ 0.11
CDK5-201ENST00000297518 SNRPA1P09661 255 aaKnown RBP15.75■□□□□ 0.11
CDK5-201ENST00000297518 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
CDK5-201ENST00000297518 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
CDK5-201ENST00000297518 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
CDK5-201ENST00000297518 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
CDK5-201ENST00000297518 PRAMEF22A3QJZ6 481 aa15.73■□□□□ 0.11
CDK5-201ENST00000297518 ZPR1O75312 459 aa15.73■□□□□ 0.11
CDK5-201ENST00000297518 EIF5P55010 431 aaKnown RBP15.73■□□□□ 0.11
CDK5-201ENST00000297518 MRS2Q9HD23 443 aa15.73■□□□□ 0.11
CDK5-201ENST00000297518 USP16Q9Y5T5 823 aa15.73■□□□□ 0.11
CDK5-201ENST00000297518 A1BGP04217 495 aa15.72■□□□□ 0.11
CDK5-201ENST00000297518 IL6STP40189 918 aaPredicted RBP15.72■□□□□ 0.11
CDK5-201ENST00000297518 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
CDK5-201ENST00000297518 NLGN2Q8NFZ4 835 aa15.72■□□□□ 0.11
CDK5-201ENST00000297518 NARFQ9UHQ1 456 aa15.72■□□□□ 0.11
CDK5-201ENST00000297518 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
CDK5-201ENST00000297518 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
CDK5-201ENST00000297518 CD2APQ9Y5K6 639 aa15.72■□□□□ 0.11
CDK5-201ENST00000297518 SCN7AQ01118 1682 aa15.71■□□□□ 0.11
CDK5-201ENST00000297518 A0A087WZG4 1122 aa15.71■□□□□ 0.11
CDK5-201ENST00000297518 APAF1O14727 1248 aa15.71■□□□□ 0.11
CDK5-201ENST00000297518 FKBP8Q14318 412 aa15.71■□□□□ 0.11
CDK5-201ENST00000297518 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.11
CDK5-201ENST00000297518 BABAM1Q9NWV8 329 aa15.71■□□□□ 0.11
CDK5-201ENST00000297518 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
CDK5-201ENST00000297518 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
CDK5-201ENST00000297518 PARP3Q9Y6F1 533 aa15.7■□□□□ 0.1
CDK5-201ENST00000297518 KIF13BQ9NQT8 1826 aa15.7■□□□□ 0.1
CDK5-201ENST00000297518 GIGYF1O75420 1035 aaPredicted RBP15.69■□□□□ 0.1
CDK5-201ENST00000297518 C10orf71Q711Q0 1435 aa15.68■□□□□ 0.1
CDK5-201ENST00000297518 BCORQ6W2J9 1755 aa15.68■□□□□ 0.1
CDK5-201ENST00000297518 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
CDK5-201ENST00000297518 DDR1Q08345 913 aa15.67■□□□□ 0.1
CDK5-201ENST00000297518 BCL2L12Q9HB09 334 aa15.67■□□□□ 0.1
CDK5-201ENST00000297518 TBC1D2BQ9UPU7 963 aa15.67■□□□□ 0.1
CDK5-201ENST00000297518 NBPF26B4DH59 902 aa15.66■□□□□ 0.1
CDK5-201ENST00000297518 POLRMTO00411 1230 aaKnown RBP15.66■□□□□ 0.1
CDK5-201ENST00000297518 CHL1O00533 1208 aa15.66■□□□□ 0.1
CDK5-201ENST00000297518 TM4SF1P30408 202 aa15.66■□□□□ 0.1
CDK5-201ENST00000297518 NBPF10Q6P3W6 841 aaKnown RBP15.66■□□□□ 0.1
CDK5-201ENST00000297518 NBPF15Q8N660 670 aa15.66■□□□□ 0.1
CDK5-201ENST00000297518 LAS1LQ9Y4W2 734 aaKnown RBP15.66■□□□□ 0.1
CDK5-201ENST00000297518 KIAA1551Q9HCM1 1747 aa15.65■□□□□ 0.1
CDK5-201ENST00000297518 CAMTA2O94983 1202 aa15.65■□□□□ 0.1
CDK5-201ENST00000297518 NFIXQ14938 502 aa15.65■□□□□ 0.1
CDK5-201ENST00000297518 GPR162Q16538 588 aa15.65■□□□□ 0.1
CDK5-201ENST00000297518 DZIP3Q86Y13 1208 aaKnown RBP15.65■□□□□ 0.1
CDK5-201ENST00000297518 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
CDK5-201ENST00000297518 AFDNP55196 1824 aaKnown RBP15.65■□□□□ 0.1
CDK5-201ENST00000297518 NRXN2Q9P2S2 1712 aa15.65■□□□□ 0.1
CDK5-201ENST00000297518 CALD1Q05682 793 aaKnown RBP15.64■□□□□ 0.09
CDK5-201ENST00000297518 CFAP44Q96MT7 982 aa15.64■□□□□ 0.09
CDK5-201ENST00000297518 PXDNLA1KZ92 1463 aa15.64■□□□□ 0.09
CDK5-201ENST00000297518 N4BP2Q86UW6 1770 aaPredicted RBP15.63■□□□□ 0.09
CDK5-201ENST00000297518 ERBB4Q15303 1308 aa15.63■□□□□ 0.09
CDK5-201ENST00000297518 TGFB2P61812 414 aa15.62■□□□□ 0.09
CDK5-201ENST00000297518 TBC1D9BQ66K14 1250 aa15.62■□□□□ 0.09
CDK5-201ENST00000297518 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
CDK5-201ENST00000297518 IFT57Q9NWB7 429 aa15.62■□□□□ 0.09
CDK5-201ENST00000297518 SERPINB2P05120 415 aa15.61■□□□□ 0.09
CDK5-201ENST00000297518 ZNF853P0CG23 659 aa15.61■□□□□ 0.09
CDK5-201ENST00000297518 GNAI1P63096 354 aa15.61■□□□□ 0.09
CDK5-201ENST00000297518 ZNF652Q9Y2D9 606 aa15.61■□□□□ 0.09
CDK5-201ENST00000297518 CARMIL3Q8ND23 1372 aa15.61■□□□□ 0.09
CDK5-201ENST00000297518 RGL2O15211 777 aa15.6■□□□□ 0.09
CDK5-201ENST00000297518 MYL6BP14649 208 aa15.6■□□□□ 0.09
CDK5-201ENST00000297518 YBX3P16989 372 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■■■□□ 14.6
CDK5-201ENST00000297518 EIF2S2P20042 333 aaKnown RBP15.6■□□□□ 0.09
CDK5-201ENST00000297518 CCDC27Q2M243 656 aa15.6■□□□□ 0.09
CDK5-201ENST00000297518 KRT24Q2M2I5 525 aa15.6■□□□□ 0.09
CDK5-201ENST00000297518 CLEC4GQ6UXB4 293 aa15.6■□□□□ 0.09
CDK5-201ENST00000297518 MBIPQ9NS73 344 aa15.6■□□□□ 0.09
CDK5-201ENST00000297518 GOLGB1Q14789 3259 aaKnown RBP15.6■□□□□ 0.09
CDK5-201ENST00000297518 CHD4Q14839 1912 aa15.6■□□□□ 0.09
CDK5-201ENST00000297518 SENP3-EIF4A1A0A087X0R7 540 aa15.59■□□□□ 0.09
CDK5-201ENST00000297518 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
CDK5-201ENST00000297518 HOXB7P09629 217 aa15.59■□□□□ 0.09
CDK5-201ENST00000297518 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
CDK5-201ENST00000297518 FAM9BQ8IZU0 186 aa15.59■□□□□ 0.09
CDK5-201ENST00000297518 NGEFQ8N5V2 710 aa15.59■□□□□ 0.09
CDK5-201ENST00000297518 SETDB2Q96T68 719 aa15.59■□□□□ 0.09
CDK5-201ENST00000297518 BRCA1P38398 1863 aaKnown RBP15.59■□□□□ 0.09
CDK5-201ENST00000297518 GRIN3BO60391 1043 aa15.58■□□□□ 0.08
CDK5-201ENST00000297518 DPEP1P16444 411 aa15.58■□□□□ 0.08
CDK5-201ENST00000297518 WWC3Q9ULE0 1092 aa15.58■□□□□ 0.08
CDK5-201ENST00000297518 UTRNP46939 3433 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms