RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 KDM3BQ7LBC6 1761 aa29.78■■■□□ 2.36
GFRA4-201ENST00000290417 STARD3NLO95772 234 aa29.76■■■□□ 2.35
GFRA4-201ENST00000290417 RFC4P35249 363 aa29.76■■■□□ 2.35
GFRA4-201ENST00000290417 PNISRQ8TF01 805 aaKnown RBP29.76■■■□□ 2.35
GFRA4-201ENST00000290417 TEX13AQ9BXU3 409 aaPredicted RBP29.76■■■□□ 2.35
GFRA4-201ENST00000290417 FHDC1Q9C0D6 1143 aaPredicted RBP29.74■■■□□ 2.35
GFRA4-201ENST00000290417 ZBTB1Q9Y2K1 713 aa29.74■■■□□ 2.35
GFRA4-201ENST00000290417 CANXP27824 592 aaKnown RBP29.71■■■□□ 2.35
GFRA4-201ENST00000290417 KLHL34Q8N239 644 aa29.71■■■□□ 2.35
GFRA4-201ENST00000290417 SOS1Q07889 1333 aaPredicted RBP29.71■■■□□ 2.35
GFRA4-201ENST00000290417 TRIM35Q9UPQ4 493 aa29.71■■■□□ 2.35
GFRA4-201ENST00000290417 PRAMEF22A3QJZ6 481 aa29.7■■■□□ 2.34
GFRA4-201ENST00000290417 APAF1O14727 1248 aa29.7■■■□□ 2.34
GFRA4-201ENST00000290417 SNRPA1P09661 255 aaKnown RBP29.7■■■□□ 2.34
GFRA4-201ENST00000290417 SYT17Q9BSW7 474 aa29.68■■■□□ 2.34
GFRA4-201ENST00000290417 SRP68Q9UHB9 627 aaKnown RBP29.68■■■□□ 2.34
GFRA4-201ENST00000290417 USP16Q9Y5T5 823 aa29.68■■■□□ 2.34
GFRA4-201ENST00000290417 COL15A1P39059 1388 aa29.68■■■□□ 2.34
GFRA4-201ENST00000290417 TSPYL4Q9UJ04 414 aa29.67■■■□□ 2.34
GFRA4-201ENST00000290417 A1BGP04217 495 aa29.66■■■□□ 2.34
GFRA4-201ENST00000290417 GYS1P13807 737 aa29.66■■■□□ 2.34
GFRA4-201ENST00000290417 USP42Q9H9J4 1324 aaKnown RBP29.66■■■□□ 2.34
GFRA4-201ENST00000290417 LAMB4A4D0S4 1761 aa29.65■■■□□ 2.34
GFRA4-201ENST00000290417 EIF4A1P60842 406 aaKnown RBP29.65■■■□□ 2.34
GFRA4-201ENST00000290417 NLGN1Q8N2Q7 840 aa29.65■■■□□ 2.34
GFRA4-201ENST00000290417 ZPR1O75312 459 aa29.63■■■□□ 2.33
GFRA4-201ENST00000290417 ZNF330Q9Y3S2 320 aaPredicted RBP29.63■■■□□ 2.33
GFRA4-201ENST00000290417 MMP10P09238 476 aa29.62■■■□□ 2.33
GFRA4-201ENST00000290417 EIF5P55010 431 aaKnown RBP29.62■■■□□ 2.33
GFRA4-201ENST00000290417 LAS1LQ9Y4W2 734 aaKnown RBP29.62■■■□□ 2.33
GFRA4-201ENST00000290417 USPL1Q5W0Q7 1092 aa29.62■■■□□ 2.33
GFRA4-201ENST00000290417 BABAM1Q9NWV8 329 aa29.62■■■□□ 2.33
GFRA4-201ENST00000290417 IL6STP40189 918 aaPredicted RBP29.61■■■□□ 2.33
GFRA4-201ENST00000290417 PIP4K2AP48426 406 aaPredicted RBP29.61■■■□□ 2.33
GFRA4-201ENST00000290417 NARFQ9UHQ1 456 aa29.61■■■□□ 2.33
GFRA4-201ENST00000290417 GIGYF1O75420 1035 aaPredicted RBP29.6■■■□□ 2.33
GFRA4-201ENST00000290417 FKBP8Q14318 412 aa29.6■■■□□ 2.33
GFRA4-201ENST00000290417 A0A087WZG4 1122 aa29.59■■■□□ 2.33
GFRA4-201ENST00000290417 NPM2Q86SE8 214 aaKnown RBP29.59■■■□□ 2.33
GFRA4-201ENST00000290417 SENP3-EIF4A1A0A087X0R7 540 aa29.58■■■□□ 2.33
GFRA4-201ENST00000290417 CHL1O00533 1208 aa29.56■■■□□ 2.32
GFRA4-201ENST00000290417 FAM9BQ8IZU0 186 aa29.55■■■□□ 2.32
GFRA4-201ENST00000290417 NLGN2Q8NFZ4 835 aa29.55■■■□□ 2.32
GFRA4-201ENST00000290417 TBC1D2BQ9UPU7 963 aa29.55■■■□□ 2.32
GFRA4-201ENST00000290417 PARP3Q9Y6F1 533 aa29.54■■■□□ 2.32
GFRA4-201ENST00000290417 SCN7AQ01118 1682 aa29.54■■■□□ 2.32
GFRA4-201ENST00000290417 DCAF8L1A6NGE4 600 aa29.54■■■□□ 2.32
GFRA4-201ENST00000290417 CD2APQ9Y5K6 639 aa29.54■■■□□ 2.32
GFRA4-201ENST00000290417 NBPF26B4DH59 902 aa29.53■■■□□ 2.32
GFRA4-201ENST00000290417 NBPF10Q6P3W6 841 aaKnown RBP29.53■■■□□ 2.32
GFRA4-201ENST00000290417 NBPF15Q8N660 670 aa29.53■■■□□ 2.32
GFRA4-201ENST00000290417 CFAP44Q96MT7 982 aa29.53■■■□□ 2.32
GFRA4-201ENST00000290417 BCL2L12Q9HB09 334 aa29.53■■■□□ 2.32
GFRA4-201ENST00000290417 CALD1Q05682 793 aaKnown RBP29.52■■■□□ 2.32
GFRA4-201ENST00000290417 BCORQ6W2J9 1755 aa29.5■■■□□ 2.31
GFRA4-201ENST00000290417 TM4SF1P30408 202 aa29.5■■■□□ 2.31
GFRA4-201ENST00000290417 DDR1Q08345 913 aa29.5■■■□□ 2.31
GFRA4-201ENST00000290417 DZIP3Q86Y13 1208 aaKnown RBP29.5■■■□□ 2.31
GFRA4-201ENST00000290417 KIF13BQ9NQT8 1826 aa29.49■■■□□ 2.31
GFRA4-201ENST00000290417 EIF2S2P20042 333 aaKnown RBP29.48■■■□□ 2.31
GFRA4-201ENST00000290417 NFIXQ14938 502 aa29.47■■■□□ 2.31
GFRA4-201ENST00000290417 KRT24Q2M2I5 525 aa29.47■■■□□ 2.31
GFRA4-201ENST00000290417 MBIPQ9NS73 344 aa29.47■■■□□ 2.31
GFRA4-201ENST00000290417 IFT57Q9NWB7 429 aa29.47■■■□□ 2.31
GFRA4-201ENST00000290417 AFDNP55196 1824 aaKnown RBP29.47■■■□□ 2.31
GFRA4-201ENST00000290417 POLRMTO00411 1230 aaKnown RBP29.46■■■□□ 2.31
GFRA4-201ENST00000290417 CAMTA2O94983 1202 aa29.46■■■□□ 2.31
GFRA4-201ENST00000290417 ZNF853P0CG23 659 aa29.46■■■□□ 2.31
GFRA4-201ENST00000290417 GNAI1P63096 354 aa29.46■■■□□ 2.31
GFRA4-201ENST00000290417 CCDC27Q2M243 656 aa29.45■■■□□ 2.31
GFRA4-201ENST00000290417 BICDL1Q6ZP65 573 aa29.45■■■□□ 2.31
GFRA4-201ENST00000290417 NGEFQ8N5V2 710 aa29.45■■■□□ 2.31
GFRA4-201ENST00000290417 MYL6BP14649 208 aa29.45■■■□□ 2.3
GFRA4-201ENST00000290417 SALL2Q9Y467 1007 aaPredicted RBP29.45■■■□□ 2.3
GFRA4-201ENST00000290417 C10orf71Q711Q0 1435 aa29.44■■■□□ 2.3
GFRA4-201ENST00000290417 TBC1D9BQ66K14 1250 aa29.44■■■□□ 2.3
GFRA4-201ENST00000290417 WWC1Q8IX03 1113 aa29.44■■■□□ 2.3
GFRA4-201ENST00000290417 PELP1Q8IZL8 1130 aaKnown RBP29.44■■■□□ 2.3
GFRA4-201ENST00000290417 NECTIN2Q92692 538 aa29.43■■■□□ 2.3
GFRA4-201ENST00000290417 N4BP2Q86UW6 1770 aaPredicted RBP29.42■■■□□ 2.3
GFRA4-201ENST00000290417 ERBB4Q15303 1308 aa29.42■■■□□ 2.3
GFRA4-201ENST00000290417 GPR162Q16538 588 aa29.42■■■□□ 2.3
GFRA4-201ENST00000290417 NRXN2Q9P2S2 1712 aa29.4■■■□□ 2.3
GFRA4-201ENST00000290417 NCBP3Q53F19 620 aaKnown RBP29.4■■■□□ 2.3
GFRA4-201ENST00000290417 KIAA1551Q9HCM1 1747 aa29.4■■■□□ 2.3
GFRA4-201ENST00000290417 SERPINB2P05120 415 aa29.39■■■□□ 2.3
GFRA4-201ENST00000290417 DIEXFQ68CQ4 756 aaKnown RBP29.39■■■□□ 2.3
GFRA4-201ENST00000290417 ZNF652Q9Y2D9 606 aa29.38■■■□□ 2.29
GFRA4-201ENST00000290417 PXDNLA1KZ92 1463 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 DUSP27Q5VZP5 1158 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 CLEC4GQ6UXB4 293 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 CCER2I3L3R5 266 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 ANXA1P04083 346 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 HOXB7P09629 217 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 TGFB2P61812 414 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 PDIA6Q15084 440 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 PROSER3Q2NL68 480 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 KIF6Q6ZMV9 814 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 TTLL7Q6ZT98 887 aa29.37■■■□□ 2.29
GFRA4-201ENST00000290417 SETDB2Q96T68 719 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms