RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 EIF4G3O43432 1585 aaKnown RBP13.56□□□□□ -0.24
SKP2-202ENST00000274255 TNNT1P13805 278 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 SLC39A6Q13433 755 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 TAF7LQ5H9L4 462 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 PDILTQ8N807 584 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 EID1Q9Y6B2 187 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 RPGRIP1LQ68CZ1 1315 aa13.56□□□□□ -0.24
SKP2-202ENST00000274255 GNAT3A8MTJ3 354 aa13.55□□□□□ -0.24
SKP2-202ENST00000274255 ANO6Q4KMQ2 910 aa13.55□□□□□ -0.24
SKP2-202ENST00000274255 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
SKP2-202ENST00000274255 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
SKP2-202ENST00000274255 PES1O00541 588 aaKnown RBP13.55□□□□□ -0.24
SKP2-202ENST00000274255 KCNQ3O43525 872 aa13.55□□□□□ -0.24
SKP2-202ENST00000274255 NAA30Q147X3 362 aaPredicted RBP13.55□□□□□ -0.24
SKP2-202ENST00000274255 CCDC73Q6ZRK6 1079 aa13.55□□□□□ -0.24
SKP2-202ENST00000274255 SNRKQ9NRH2 765 aa13.55□□□□□ -0.24
SKP2-202ENST00000274255 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
SKP2-202ENST00000274255 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
SKP2-202ENST00000274255 BTBD11A6QL63 1104 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 HAND2P61296 217 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 PTPN21Q16825 1174 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 PPP1R9BQ96SB3 815 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 MAP7D2Q96T17 732 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 EYA1Q99502 592 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 PHF23Q9BUL5 403 aaPredicted RBP13.54□□□□□ -0.24
SKP2-202ENST00000274255 HMGN5P82970 282 aaKnown RBP13.54□□□□□ -0.24
SKP2-202ENST00000274255 HSP90AB3PQ58FF7 597 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 ZNF165P49910 485 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 KIF1BPQ96EK5 621 aa13.54□□□□□ -0.24
SKP2-202ENST00000274255 PRDM15P57071 1507 aaPredicted RBP13.53□□□□□ -0.24
SKP2-202ENST00000274255 CPLX1O14810 134 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
SKP2-202ENST00000274255 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 DDX46Q7L014 1031 aaKnown RBP13.53□□□□□ -0.24
SKP2-202ENST00000274255 NRBP1Q9UHY1 535 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 NRDCO43847 1150 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 LARGE1O95461 756 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
SKP2-202ENST00000274255 FKBP4Q02790 459 aaKnown RBP eCLIP13.53□□□□□ -0.24
SKP2-202ENST00000274255 NEXNQ0ZGT2 675 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 RNF20Q5VTR2 975 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 CCDC129Q6ZRS4 1044 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
SKP2-202ENST00000274255 IL25Q9H293 177 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 PYCARDQ9ULZ3 195 aa13.53□□□□□ -0.24
SKP2-202ENST00000274255 F13A1P00488 732 aa13.52□□□□□ -0.24
SKP2-202ENST00000274255 LGR6Q9HBX8 967 aa13.52□□□□□ -0.24
SKP2-202ENST00000274255 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.24
SKP2-202ENST00000274255 ZNF518AQ6AHZ1 1483 aa13.52□□□□□ -0.25
SKP2-202ENST00000274255 DYNC1I1O14576 645 aa13.52□□□□□ -0.25
SKP2-202ENST00000274255 KINO60870 393 aaKnown RBP13.52□□□□□ -0.25
SKP2-202ENST00000274255 PTH1RQ03431 593 aa13.52□□□□□ -0.25
SKP2-202ENST00000274255 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
SKP2-202ENST00000274255 UBE2HP62256 183 aa13.52□□□□□ -0.25
SKP2-202ENST00000274255 ATP8B2P98198 1209 aa13.52□□□□□ -0.25
SKP2-202ENST00000274255 DNAAF4Q8WXU2 420 aa13.52□□□□□ -0.25
SKP2-202ENST00000274255 ZSWIM4Q9H7M6 989 aa13.52□□□□□ -0.25
SKP2-202ENST00000274255 ABCC4O15439 1325 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 BRD1O95696 1058 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
SKP2-202ENST00000274255 OTUD7BQ6GQQ9 843 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 SNX14Q9Y5W7 946 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 LIG1P18858 919 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 MAP3K19Q56UN5 1328 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 POLR3GO15318 223 aaPredicted RBP13.51□□□□□ -0.25
SKP2-202ENST00000274255 CCDC144CPQ8IYA2 1237 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 BRF1Q92994 677 aa13.51□□□□□ -0.25
SKP2-202ENST00000274255 RTL1A6NKG5 1358 aa13.5□□□□□ -0.25
SKP2-202ENST00000274255 JAK2O60674 1132 aa13.5□□□□□ -0.25
SKP2-202ENST00000274255 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.5□□□□□ -0.25
SKP2-202ENST00000274255 CHL1O00533 1208 aa13.5□□□□□ -0.25
SKP2-202ENST00000274255 TTC21BQ7Z4L5 1316 aa13.5□□□□□ -0.25
SKP2-202ENST00000274255 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
SKP2-202ENST00000274255 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
SKP2-202ENST00000274255 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
SKP2-202ENST00000274255 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
SKP2-202ENST00000274255 USP16Q9Y5T5 823 aa13.49□□□□□ -0.25
SKP2-202ENST00000274255 ADGBQ8N7X0 1667 aa13.49□□□□□ -0.25
SKP2-202ENST00000274255 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
SKP2-202ENST00000274255 PTPRCP08575 1304 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 TNNT3P45378 269 aaPredicted RBP13.48□□□□□ -0.25
SKP2-202ENST00000274255 TYRO3Q06418 890 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 MYD88Q99836 296 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 USP44Q9H0E7 712 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 BCL2L12Q9HB09 334 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 NCOA5Q9HCD5 579 aaKnown RBP13.48□□□□□ -0.25
SKP2-202ENST00000274255 TTC37Q6PGP7 1564 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
SKP2-202ENST00000274255 ABCC2Q92887 1545 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
SKP2-202ENST00000274255 STK38Q15208 465 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 RRP12Q5JTH9 1297 aaKnown RBP13.48□□□□□ -0.25
SKP2-202ENST00000274255 RUFY3Q7L099 469 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 FTOQ9C0B1 505 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms