RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 BCS1LQ9Y276 419 aa8.76□□□□□ -1.01
CD53-201ENST00000271324 KDRP35968 1356 aa8.76□□□□□ -1.01
CD53-201ENST00000271324 TJP1Q07157 1748 aa8.76□□□□□ -1.01
CD53-201ENST00000271324 TRAPPC3LQ5T215 181 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 ARHGEF1Q92888 912 aaKnown RBP8.75□□□□□ -1.01
CD53-201ENST00000271324 POLR3GLQ9BT43 218 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
CD53-201ENST00000271324 WDR90Q96KV7 1748 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 SCN11AQ9UI33 1791 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 GYS1P13807 737 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 DPEP1P16444 411 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 DDX10Q13206 875 aaKnown RBP8.75□□□□□ -1.01
CD53-201ENST00000271324 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 NMRK2Q9NPI5 230 aa8.75□□□□□ -1.01
CD53-201ENST00000271324 NOP58Q9Y2X3 529 aaKnown RBP8.75□□□□□ -1.01
CD53-201ENST00000271324 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
CD53-201ENST00000271324 KDM6AO15550 1401 aaPredicted RBP8.74□□□□□ -1.01
CD53-201ENST00000271324 C10orf71Q711Q0 1435 aa8.74□□□□□ -1.01
CD53-201ENST00000271324 ADAMTS7Q9UKP4 1686 aa8.74□□□□□ -1.01
CD53-201ENST00000271324 AFDNP55196 1824 aaKnown RBP8.74□□□□□ -1.01
CD53-201ENST00000271324 KCNA3P22001 575 aa8.74□□□□□ -1.01
CD53-201ENST00000271324 HMGB2P26583 209 aaKnown RBP8.74□□□□□ -1.01
CD53-201ENST00000271324 HTRA3P83110 453 aa8.74□□□□□ -1.01
CD53-201ENST00000271324 DNAJC5GQ8N7S2 189 aa8.74□□□□□ -1.01
CD53-201ENST00000271324 PPP4R2Q9NY27 417 aa8.74□□□□□ -1.01
CD53-201ENST00000271324 FCHSD2O94868 740 aa8.73□□□□□ -1.01
CD53-201ENST00000271324 TGFB2P61812 414 aa8.73□□□□□ -1.01
CD53-201ENST00000271324 NLGN1Q8N2Q7 840 aa8.73□□□□□ -1.01
CD53-201ENST00000271324 SRP68Q9UHB9 627 aaKnown RBP8.73□□□□□ -1.01
CD53-201ENST00000271324 ERVV-2B6SEH9 535 aa8.72□□□□□ -1.01
CD53-201ENST00000271324 PTCD1O75127 700 aaKnown RBP8.72□□□□□ -1.01
CD53-201ENST00000271324 RPS6KA4O75676 772 aa8.72□□□□□ -1.01
CD53-201ENST00000271324 RFC4P35249 363 aa8.72□□□□□ -1.01
CD53-201ENST00000271324 AEBP1Q8IUX7 1158 aa8.72□□□□□ -1.01
CD53-201ENST00000271324 CNTNAP4Q9C0A0 1308 aa8.71□□□□□ -1.01
CD53-201ENST00000271324 TOMM70O94826 608 aa8.71□□□□□ -1.01
CD53-201ENST00000271324 DDR1Q08345 913 aa8.71□□□□□ -1.01
CD53-201ENST00000271324 RC3H1Q5TC82 1133 aaKnown RBP8.71□□□□□ -1.01
CD53-201ENST00000271324 C9orf131Q5VYM1 1079 aa8.71□□□□□ -1.01
CD53-201ENST00000271324 ZNF530Q6P9A1 599 aaPredicted RBP8.71□□□□□ -1.01
CD53-201ENST00000271324 DCAF5Q96JK2 942 aa8.71□□□□□ -1.01
CD53-201ENST00000271324 CCDC87Q9NVE4 849 aa8.71□□□□□ -1.01
CD53-201ENST00000271324 PARP3Q9Y6F1 533 aa8.71□□□□□ -1.01
CD53-201ENST00000271324 KCPQ6ZWJ8 1503 aa8.71□□□□□ -1.02
CD53-201ENST00000271324 CHRNA5P30532 468 aa8.7□□□□□ -1.02
CD53-201ENST00000271324 CRKLP46109 303 aaKnown RBP8.7□□□□□ -1.02
CD53-201ENST00000271324 APLP1P51693 650 aa8.7□□□□□ -1.02
CD53-201ENST00000271324 CABP4P57796 275 aa8.7□□□□□ -1.02
CD53-201ENST00000271324 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
CD53-201ENST00000271324 DLEC1Q9Y238 1755 aa8.7□□□□□ -1.02
CD53-201ENST00000271324 ANP32AP39687 249 aaKnown RBP8.7□□□□□ -1.02
CD53-201ENST00000271324 PLEKHO1Q53GL0 409 aaPredicted RBP8.7□□□□□ -1.02
CD53-201ENST00000271324 TNRC6CQ9HCJ0 1690 aaKnown RBP8.69□□□□□ -1.02
CD53-201ENST00000271324 CACNA1SQ13698 1873 aa8.69□□□□□ -1.02
CD53-201ENST00000271324 MTHFSP49914 203 aa8.69□□□□□ -1.02
CD53-201ENST00000271324 INTS5Q6P9B9 1019 aaKnown RBP8.69□□□□□ -1.02
CD53-201ENST00000271324 PANK3Q9H999 370 aa8.69□□□□□ -1.02
CD53-201ENST00000271324 RRAGCQ9HB90 399 aa8.69□□□□□ -1.02
CD53-201ENST00000271324 PIM2Q9P1W9 311 aa8.69□□□□□ -1.02
CD53-201ENST00000271324 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
CD53-201ENST00000271324 USP42Q9H9J4 1324 aaKnown RBP8.68□□□□□ -1.02
CD53-201ENST00000271324 HSP90AB1P08238 724 aaKnown RBP8.68□□□□□ -1.02
CD53-201ENST00000271324 SULT6B1Q6IMI4 303 aa8.68□□□□□ -1.02
CD53-201ENST00000271324 RNF181Q9P0P0 153 aa8.68□□□□□ -1.02
CD53-201ENST00000271324 NRXN2Q9P2S2 1712 aa8.68□□□□□ -1.02
CD53-201ENST00000271324 ANKRD31Q8N7Z5 1873 aa8.68□□□□□ -1.02
CD53-201ENST00000271324 POLRMTO00411 1230 aaKnown RBP8.67□□□□□ -1.02
CD53-201ENST00000271324 TM4SF1P30408 202 aa8.67□□□□□ -1.02
CD53-201ENST00000271324 PRELPP51888 382 aa8.67□□□□□ -1.02
CD53-201ENST00000271324 HNRNPUQ00839 825 aaKnown RBP eCLIP8.67□□□□□ -1.02
CD53-201ENST00000271324 RASSF7Q02833 373 aa8.67□□□□□ -1.02
CD53-201ENST00000271324 DALRD3Q5D0E6 543 aaKnown RBP8.67□□□□□ -1.02
CD53-201ENST00000271324 USPL1Q5W0Q7 1092 aa8.67□□□□□ -1.02
CD53-201ENST00000271324 DNAJC10Q8IXB1 793 aa8.67□□□□□ -1.02
CD53-201ENST00000271324 LGR6Q9HBX8 967 aa8.67□□□□□ -1.02
CD53-201ENST00000271324 HSPA5P11021 654 aaKnown RBP8.66□□□□□ -1.02
CD53-201ENST00000271324 SLC39A6Q13433 755 aa8.66□□□□□ -1.02
CD53-201ENST00000271324 AMOTQ4VCS5 1084 aa8.66□□□□□ -1.02
CD53-201ENST00000271324 C1orf141Q5JVX7 400 aa8.66□□□□□ -1.02
CD53-201ENST00000271324 COL13A1Q5TAT6 717 aaPredicted RBP8.66□□□□□ -1.02
CD53-201ENST00000271324 RBM46Q8TBY0 533 aaKnown RBP8.66□□□□□ -1.02
CD53-201ENST00000271324 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
CD53-201ENST00000271324 DICER1Q9UPY3 1922 aaKnown RBP8.66□□□□□ -1.02
CD53-201ENST00000271324 PRR29P0C7W0 189 aa8.65□□□□□ -1.02
CD53-201ENST00000271324 IL13P35225 146 aa8.65□□□□□ -1.02
CD53-201ENST00000271324 CHADLQ6NUI6 762 aa8.65□□□□□ -1.02
CD53-201ENST00000271324 MORC1Q86VD1 984 aa8.65□□□□□ -1.02
CD53-201ENST00000271324 C16orf71Q8IYS4 520 aaPredicted RBP8.65□□□□□ -1.02
CD53-201ENST00000271324 PLEKHG2Q9H7P9 1386 aa8.65□□□□□ -1.02
CD53-201ENST00000271324 COL11A2P13942 1736 aaPredicted RBP8.65□□□□□ -1.03
CD53-201ENST00000271324 CYP19A1P11511 503 aaPredicted RBP8.64□□□□□ -1.03
CD53-201ENST00000271324 NBR1Q14596 966 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 KLRG1Q96E93 195 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 BCL2L12Q9HB09 334 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 SOS1Q07889 1333 aaPredicted RBP8.64□□□□□ -1.03
CD53-201ENST00000271324 ZPR1O75312 459 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 HMOX1P09601 288 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 CLCN6P51797 869 aa8.64□□□□□ -1.03
CD53-201ENST00000271324 NFIXQ14938 502 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms